Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPUSD1Q9UJJ7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RPUSD1Q9UJJ7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RPUSD1Q9UJJ7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPUSD1Q9UJJ7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPUSD1Q9UJJ7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RPUSD1Q9UJJ7 DUX4L11-201ENST00000611504 1267 ntBASIC21.33■■□□□ 1.01
RPUSD1Q9UJJ7 DUX4L12-201ENST00000614593 1267 ntBASIC21.33■■□□□ 1.01
RPUSD1Q9UJJ7 DUX4L14-201ENST00000621227 1267 ntBASIC21.33■■□□□ 1.01
RPUSD1Q9UJJ7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
RPUSD1Q9UJJ7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
RPUSD1Q9UJJ7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.32■■□□□ 1
RPUSD1Q9UJJ7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RPUSD1Q9UJJ7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.32■■□□□ 1
RPUSD1Q9UJJ7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.32■■□□□ 1
RPUSD1Q9UJJ7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RPUSD1Q9UJJ7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RPUSD1Q9UJJ7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RPUSD1Q9UJJ7 AC135983.2-203ENST00000454486 1613 ntBASIC21.31■■□□□ 1
RPUSD1Q9UJJ7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RPUSD1Q9UJJ7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.31■■□□□ 1
RPUSD1Q9UJJ7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.3■■□□□ 1
RPUSD1Q9UJJ7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RPUSD1Q9UJJ7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RPUSD1Q9UJJ7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.29■■□□□ 1
RPUSD1Q9UJJ7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.29■■□□□ 1
RPUSD1Q9UJJ7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
RPUSD1Q9UJJ7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RPUSD1Q9UJJ7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.28■■□□□ 1
RPUSD1Q9UJJ7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RPUSD1Q9UJJ7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.28■■□□□ 1
RPUSD1Q9UJJ7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
RPUSD1Q9UJJ7 AP004833.2-201ENST00000532228 1454 ntBASIC21.27■■□□□ 1
RPUSD1Q9UJJ7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RPUSD1Q9UJJ7 WHAMMP2-203ENST00000563942 1603 ntBASIC21.27■■□□□ 1
RPUSD1Q9UJJ7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.27■■□□□ 1
RPUSD1Q9UJJ7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.27■□□□□ 0.99
RPUSD1Q9UJJ7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.26■□□□□ 0.99
RPUSD1Q9UJJ7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.26■□□□□ 0.99
RPUSD1Q9UJJ7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.26■□□□□ 0.99
RPUSD1Q9UJJ7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.26■□□□□ 0.99
RPUSD1Q9UJJ7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPUSD1Q9UJJ7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPUSD1Q9UJJ7 DUX4L13-201ENST00000554103 1267 ntBASIC21.24■□□□□ 0.99
RPUSD1Q9UJJ7 DUX4L15-201ENST00000611059 1267 ntBASIC21.24■□□□□ 0.99
RPUSD1Q9UJJ7 DUX4L23-201ENST00000615195 1269 ntBASIC21.24■□□□□ 0.99
RPUSD1Q9UJJ7 DUX4L24-201ENST00000617576 1269 ntBASIC21.24■□□□□ 0.99
RPUSD1Q9UJJ7 DUX4L22-201ENST00000618238 1269 ntBASIC21.24■□□□□ 0.99
RPUSD1Q9UJJ7 DUX4L20-201ENST00000619712 1269 ntBASIC21.24■□□□□ 0.99
RPUSD1Q9UJJ7 DUX4L21-201ENST00000622058 1269 ntBASIC21.24■□□□□ 0.99
RPUSD1Q9UJJ7 DUX4L10-201ENST00000622460 1267 ntBASIC21.24■□□□□ 0.99
RPUSD1Q9UJJ7 DUX4L25-201ENST00000624915 1269 ntBASIC21.24■□□□□ 0.99
RPUSD1Q9UJJ7 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.24■□□□□ 0.99
RPUSD1Q9UJJ7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RPUSD1Q9UJJ7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPUSD1Q9UJJ7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPUSD1Q9UJJ7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.23■□□□□ 0.99
RPUSD1Q9UJJ7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPUSD1Q9UJJ7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RPUSD1Q9UJJ7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPUSD1Q9UJJ7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RPUSD1Q9UJJ7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPUSD1Q9UJJ7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPUSD1Q9UJJ7 MIR3648-2-201ENST00000581792 180 ntBASIC21.22■□□□□ 0.99
RPUSD1Q9UJJ7 MIR3648-1-201ENST00000615959 180 ntBASIC21.22■□□□□ 0.99
RPUSD1Q9UJJ7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RPUSD1Q9UJJ7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPUSD1Q9UJJ7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPUSD1Q9UJJ7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPUSD1Q9UJJ7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.21■□□□□ 0.99
RPUSD1Q9UJJ7 CR559946.2-201ENST00000623684 991 ntBASIC21.21■□□□□ 0.99
RPUSD1Q9UJJ7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.21■□□□□ 0.99
RPUSD1Q9UJJ7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPUSD1Q9UJJ7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.21■□□□□ 0.99
RPUSD1Q9UJJ7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPUSD1Q9UJJ7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPUSD1Q9UJJ7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPUSD1Q9UJJ7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPUSD1Q9UJJ7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RPUSD1Q9UJJ7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
RPUSD1Q9UJJ7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPUSD1Q9UJJ7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPUSD1Q9UJJ7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.2■□□□□ 0.98
RPUSD1Q9UJJ7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPUSD1Q9UJJ7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.19■□□□□ 0.98
RPUSD1Q9UJJ7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.18■□□□□ 0.98
RPUSD1Q9UJJ7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RPUSD1Q9UJJ7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPUSD1Q9UJJ7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RPUSD1Q9UJJ7 HLA-V-202ENST00000446817 847 ntBASIC21.17■□□□□ 0.98
RPUSD1Q9UJJ7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.17■□□□□ 0.98
RPUSD1Q9UJJ7 AC016575.1-201ENST00000607026 382 ntBASIC21.17■□□□□ 0.98
RPUSD1Q9UJJ7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.17■□□□□ 0.98
RPUSD1Q9UJJ7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPUSD1Q9UJJ7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.17■□□□□ 0.98
RPUSD1Q9UJJ7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RPUSD1Q9UJJ7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPUSD1Q9UJJ7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
RPUSD1Q9UJJ7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.16■□□□□ 0.98
RPUSD1Q9UJJ7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms