Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS11Q9H270 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.67■■□□□ 1.7
VPS11Q9H270 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS11Q9H270 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS11Q9H270 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
VPS11Q9H270 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
VPS11Q9H270 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS11Q9H270 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.66■■□□□ 1.7
VPS11Q9H270 CAHM-201ENST00000604200 896 ntBASIC25.66■■□□□ 1.7
VPS11Q9H270 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.66■■□□□ 1.7
VPS11Q9H270 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
VPS11Q9H270 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS11Q9H270 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
VPS11Q9H270 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
VPS11Q9H270 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
VPS11Q9H270 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
VPS11Q9H270 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.65■■□□□ 1.7
VPS11Q9H270 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
VPS11Q9H270 AC127502.1-201ENST00000399971 1502 ntBASIC25.64■■□□□ 1.7
VPS11Q9H270 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.64■■□□□ 1.7
VPS11Q9H270 AP004833.2-201ENST00000532228 1454 ntBASIC25.64■■□□□ 1.69
VPS11Q9H270 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.64■■□□□ 1.69
VPS11Q9H270 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS11Q9H270 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS11Q9H270 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS11Q9H270 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
VPS11Q9H270 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS11Q9H270 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.63■■□□□ 1.69
VPS11Q9H270 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.63■■□□□ 1.69
VPS11Q9H270 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS11Q9H270 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
VPS11Q9H270 AC136428.2-201ENST00000563187 214 ntBASIC25.61■■□□□ 1.69
VPS11Q9H270 AC097358.2-201ENST00000607541 1159 ntBASIC25.61■■□□□ 1.69
VPS11Q9H270 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.61■■□□□ 1.69
VPS11Q9H270 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
VPS11Q9H270 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
VPS11Q9H270 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.6■■□□□ 1.69
VPS11Q9H270 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.6■■□□□ 1.69
VPS11Q9H270 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
VPS11Q9H270 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
VPS11Q9H270 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
VPS11Q9H270 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
VPS11Q9H270 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
VPS11Q9H270 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.68
VPS11Q9H270 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
VPS11Q9H270 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
VPS11Q9H270 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
VPS11Q9H270 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
VPS11Q9H270 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
VPS11Q9H270 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
VPS11Q9H270 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
VPS11Q9H270 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
VPS11Q9H270 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
VPS11Q9H270 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
VPS11Q9H270 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.55■■□□□ 1.68
VPS11Q9H270 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.54■■□□□ 1.68
VPS11Q9H270 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
VPS11Q9H270 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.54■■□□□ 1.68
VPS11Q9H270 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.53■■□□□ 1.68
VPS11Q9H270 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
VPS11Q9H270 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.53■■□□□ 1.68
VPS11Q9H270 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
VPS11Q9H270 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
VPS11Q9H270 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
VPS11Q9H270 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
VPS11Q9H270 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
VPS11Q9H270 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
VPS11Q9H270 LINC01003-201ENST00000564834 1764 ntBASIC25.51■■□□□ 1.67
VPS11Q9H270 AC135731.1-201ENST00000569415 2548 ntBASIC25.51■■□□□ 1.67
VPS11Q9H270 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
VPS11Q9H270 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
VPS11Q9H270 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
VPS11Q9H270 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
VPS11Q9H270 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.5■■□□□ 1.67
VPS11Q9H270 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
VPS11Q9H270 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
VPS11Q9H270 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.5■■□□□ 1.67
VPS11Q9H270 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
VPS11Q9H270 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
VPS11Q9H270 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
VPS11Q9H270 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
VPS11Q9H270 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
VPS11Q9H270 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
VPS11Q9H270 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.49■■□□□ 1.67
VPS11Q9H270 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.48■■□□□ 1.67
VPS11Q9H270 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
VPS11Q9H270 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
VPS11Q9H270 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
VPS11Q9H270 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
VPS11Q9H270 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
VPS11Q9H270 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.47■■□□□ 1.67
VPS11Q9H270 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.47■■□□□ 1.67
VPS11Q9H270 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
VPS11Q9H270 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
VPS11Q9H270 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
VPS11Q9H270 AC100797.4-201ENST00000631653 1827 ntBASIC25.45■■□□□ 1.66
VPS11Q9H270 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.45■■□□□ 1.66
VPS11Q9H270 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.45■■□□□ 1.66
VPS11Q9H270 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
VPS11Q9H270 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.44■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms