Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.27■■□□□ 1.64
RDH11Q8TC12 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RDH11Q8TC12 LINC01003-201ENST00000564834 1764 ntBASIC25.26■■□□□ 1.63
RDH11Q8TC12 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RDH11Q8TC12 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RDH11Q8TC12 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RDH11Q8TC12 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RDH11Q8TC12 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RDH11Q8TC12 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RDH11Q8TC12 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RDH11Q8TC12 CAHM-201ENST00000604200 896 ntBASIC25.23■■□□□ 1.63
RDH11Q8TC12 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RDH11Q8TC12 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
RDH11Q8TC12 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
RDH11Q8TC12 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.22■■□□□ 1.63
RDH11Q8TC12 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RDH11Q8TC12 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RDH11Q8TC12 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RDH11Q8TC12 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
RDH11Q8TC12 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RDH11Q8TC12 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RDH11Q8TC12 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.19■■□□□ 1.62
RDH11Q8TC12 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RDH11Q8TC12 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RDH11Q8TC12 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
RDH11Q8TC12 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.18■■□□□ 1.62
RDH11Q8TC12 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
RDH11Q8TC12 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
RDH11Q8TC12 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
RDH11Q8TC12 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
RDH11Q8TC12 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
RDH11Q8TC12 AC100797.4-201ENST00000631653 1827 ntBASIC25.17■■□□□ 1.62
RDH11Q8TC12 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
RDH11Q8TC12 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.17■■□□□ 1.62
RDH11Q8TC12 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.16■■□□□ 1.62
RDH11Q8TC12 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RDH11Q8TC12 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.16■■□□□ 1.62
RDH11Q8TC12 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
RDH11Q8TC12 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
RDH11Q8TC12 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.15■■□□□ 1.62
RDH11Q8TC12 AC136428.2-201ENST00000563187 214 ntBASIC25.15■■□□□ 1.62
RDH11Q8TC12 AC097358.2-201ENST00000607541 1159 ntBASIC25.15■■□□□ 1.62
RDH11Q8TC12 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
RDH11Q8TC12 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RDH11Q8TC12 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
RDH11Q8TC12 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RDH11Q8TC12 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
RDH11Q8TC12 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
RDH11Q8TC12 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RDH11Q8TC12 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RDH11Q8TC12 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.13■■□□□ 1.61
RDH11Q8TC12 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.13■■□□□ 1.61
RDH11Q8TC12 AP002414.2-202ENST00000590929 1450 ntBASIC25.12■■□□□ 1.61
RDH11Q8TC12 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.12■■□□□ 1.61
RDH11Q8TC12 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.11■■□□□ 1.61
RDH11Q8TC12 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RDH11Q8TC12 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
RDH11Q8TC12 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
RDH11Q8TC12 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RDH11Q8TC12 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RDH11Q8TC12 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.1■■□□□ 1.61
RDH11Q8TC12 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.1■■□□□ 1.61
RDH11Q8TC12 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RDH11Q8TC12 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RDH11Q8TC12 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RDH11Q8TC12 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RDH11Q8TC12 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.09■■□□□ 1.61
RDH11Q8TC12 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RDH11Q8TC12 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RDH11Q8TC12 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RDH11Q8TC12 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RDH11Q8TC12 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
RDH11Q8TC12 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.08■■□□□ 1.61
RDH11Q8TC12 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
RDH11Q8TC12 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RDH11Q8TC12 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RDH11Q8TC12 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
RDH11Q8TC12 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RDH11Q8TC12 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
RDH11Q8TC12 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.06■■□□□ 1.6
RDH11Q8TC12 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RDH11Q8TC12 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RDH11Q8TC12 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.05■■□□□ 1.6
RDH11Q8TC12 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.05■■□□□ 1.6
RDH11Q8TC12 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RDH11Q8TC12 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.04■■□□□ 1.6
RDH11Q8TC12 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.04■■□□□ 1.6
RDH11Q8TC12 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
RDH11Q8TC12 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
RDH11Q8TC12 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.03■■□□□ 1.6
RDH11Q8TC12 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.03■■□□□ 1.6
RDH11Q8TC12 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
RDH11Q8TC12 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RDH11Q8TC12 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.02■■□□□ 1.6
RDH11Q8TC12 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
RDH11Q8TC12 MIR762-201ENST00000390236 83 ntBASIC25.02■■□□□ 1.6
RDH11Q8TC12 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.02■■□□□ 1.6
RDH11Q8TC12 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.02■■□□□ 1.6
RDH11Q8TC12 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.02■■□□□ 1.6
RDH11Q8TC12 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms