Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.18■■□□□ 1.62
CCNYL1Q8N7R7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCNYL1Q8N7R7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
CCNYL1Q8N7R7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCNYL1Q8N7R7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCNYL1Q8N7R7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCNYL1Q8N7R7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCNYL1Q8N7R7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCNYL1Q8N7R7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
CCNYL1Q8N7R7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CCNYL1Q8N7R7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CCNYL1Q8N7R7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCNYL1Q8N7R7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCNYL1Q8N7R7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.15■■□□□ 1.62
CCNYL1Q8N7R7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
CCNYL1Q8N7R7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.14■■□□□ 1.62
CCNYL1Q8N7R7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CCNYL1Q8N7R7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CCNYL1Q8N7R7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CCNYL1Q8N7R7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CCNYL1Q8N7R7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CCNYL1Q8N7R7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCNYL1Q8N7R7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCNYL1Q8N7R7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCNYL1Q8N7R7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCNYL1Q8N7R7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
CCNYL1Q8N7R7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCNYL1Q8N7R7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
CCNYL1Q8N7R7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.11■■□□□ 1.61
CCNYL1Q8N7R7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.11■■□□□ 1.61
CCNYL1Q8N7R7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.1■■□□□ 1.61
CCNYL1Q8N7R7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCNYL1Q8N7R7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.1■■□□□ 1.61
CCNYL1Q8N7R7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCNYL1Q8N7R7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCNYL1Q8N7R7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCNYL1Q8N7R7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCNYL1Q8N7R7 AC100797.4-201ENST00000631653 1827 ntBASIC25.09■■□□□ 1.61
CCNYL1Q8N7R7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.09■■□□□ 1.61
CCNYL1Q8N7R7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCNYL1Q8N7R7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCNYL1Q8N7R7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCNYL1Q8N7R7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.08■■□□□ 1.6
CCNYL1Q8N7R7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCNYL1Q8N7R7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.07■■□□□ 1.6
CCNYL1Q8N7R7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCNYL1Q8N7R7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.06■■□□□ 1.6
CCNYL1Q8N7R7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CCNYL1Q8N7R7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
CCNYL1Q8N7R7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCNYL1Q8N7R7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
CCNYL1Q8N7R7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCNYL1Q8N7R7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
CCNYL1Q8N7R7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCNYL1Q8N7R7 LINC01003-201ENST00000564834 1764 ntBASIC25.04■■□□□ 1.6
CCNYL1Q8N7R7 MIR762-201ENST00000390236 83 ntBASIC25.04■■□□□ 1.6
CCNYL1Q8N7R7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCNYL1Q8N7R7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.03■■□□□ 1.6
CCNYL1Q8N7R7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCNYL1Q8N7R7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCNYL1Q8N7R7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CCNYL1Q8N7R7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
CCNYL1Q8N7R7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
CCNYL1Q8N7R7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCNYL1Q8N7R7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CCNYL1Q8N7R7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CCNYL1Q8N7R7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.01■■□□□ 1.59
CCNYL1Q8N7R7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.01■■□□□ 1.59
CCNYL1Q8N7R7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
CCNYL1Q8N7R7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25■■□□□ 1.59
CCNYL1Q8N7R7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25■■□□□ 1.59
CCNYL1Q8N7R7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25■■□□□ 1.59
CCNYL1Q8N7R7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
CCNYL1Q8N7R7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CCNYL1Q8N7R7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
CCNYL1Q8N7R7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.99■■□□□ 1.59
CCNYL1Q8N7R7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.98■■□□□ 1.59
CCNYL1Q8N7R7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CCNYL1Q8N7R7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CCNYL1Q8N7R7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.98■■□□□ 1.59
CCNYL1Q8N7R7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CCNYL1Q8N7R7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.97■■□□□ 1.59
CCNYL1Q8N7R7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.97■■□□□ 1.59
CCNYL1Q8N7R7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
CCNYL1Q8N7R7 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.97■■□□□ 1.59
CCNYL1Q8N7R7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CCNYL1Q8N7R7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.97■■□□□ 1.59
CCNYL1Q8N7R7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCNYL1Q8N7R7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.96■■□□□ 1.59
CCNYL1Q8N7R7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCNYL1Q8N7R7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCNYL1Q8N7R7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
CCNYL1Q8N7R7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.95■■□□□ 1.59
CCNYL1Q8N7R7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.59
CCNYL1Q8N7R7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CCNYL1Q8N7R7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CCNYL1Q8N7R7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CCNYL1Q8N7R7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
CCNYL1Q8N7R7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CCNYL1Q8N7R7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms