Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.08■□□□□ 0.33
CDH20Q9HBT6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH20Q9HBT6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH20Q9HBT6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH20Q9HBT6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDH20Q9HBT6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH20Q9HBT6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH20Q9HBT6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.08■□□□□ 0.32
CDH20Q9HBT6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH20Q9HBT6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH20Q9HBT6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.08■□□□□ 0.32
CDH20Q9HBT6 C1QBPP2-201ENST00000528754 825 ntBASIC17.08■□□□□ 0.32
CDH20Q9HBT6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.08■□□□□ 0.32
CDH20Q9HBT6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH20Q9HBT6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.08■□□□□ 0.32
CDH20Q9HBT6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.08■□□□□ 0.32
CDH20Q9HBT6 AL023875.1-201ENST00000640777 796 ntBASIC17.08■□□□□ 0.32
CDH20Q9HBT6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CDH20Q9HBT6 PCDHAC2-203ENST00000615316 3011 ntBASIC17.08■□□□□ 0.32
CDH20Q9HBT6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH20Q9HBT6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDH20Q9HBT6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CDH20Q9HBT6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH20Q9HBT6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CDH20Q9HBT6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDH20Q9HBT6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 KRASP1-201ENST00000407852 552 ntBASIC17.07■□□□□ 0.32
CDH20Q9HBT6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 RN7SL471P-201ENST00000580476 299 ntBASIC17.07■□□□□ 0.32
CDH20Q9HBT6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.07■□□□□ 0.32
CDH20Q9HBT6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 FAM197Y4-202ENST00000622692 608 ntBASIC17.06■□□□□ 0.32
CDH20Q9HBT6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CDH20Q9HBT6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 NBPF21P-201ENST00000425093 1451 ntBASIC17.05■□□□□ 0.32
CDH20Q9HBT6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms