Protein–RNA interactions for Protein: P49588

AARS, Alanine--tRNA ligase, cytoplasmic, humanhuman

Known RBP eCLIP

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AARSP49588 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.136e-7■□□□□ 9.5
AARSP49588 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.196e-7■□□□□ 9.5
AARSP49588 SNHG16-208ENST00000591956 556 ntTSL 212.34□□□□□ -0.436e-7■□□□□ 9.5
AARSP49588 SMC1A-206ENST00000470241 838 ntTSL 311.39□□□□□ -0.596e-7■□□□□ 9.5
AARSP49588 SNHG16-201ENST00000448136 3607 ntTSL 1 (best) BASIC11.33□□□□□ -0.66e-7■□□□□ 9.5
AARSP49588 SNHG16-204ENST00000586942 568 ntTSL 4 BASIC11.05□□□□□ -0.646e-7■□□□□ 9.5
AARSP49588 SNHG16-207ENST00000590435 1947 ntTSL 5 BASIC10.34□□□□□ -0.756e-7■□□□□ 9.5
AARSP49588 SNHG16-202ENST00000493536 2424 ntTSL 1 (best)9.26□□□□□ -0.936e-7■□□□□ 9.5
AARSP49588 NAA15-204ENST00000480277 852 ntTSL 37.18□□□□□ -1.266e-7■□□□□ 9.5
AARSP49588 SNHG16-206ENST00000587838 884 ntTSL 35.37□□□□□ -1.556e-7■□□□□ 9.5
AARSP49588 SNORD1B-201ENST00000363091 84 ntBASIC-0.73□□□□□ -2.536e-7■□□□□ 9.5
AARSP49588 NCL-202ENST00000356936 890 ntTSL 318.61■□□□□ 0.574e-7■□□□□ 9.5
AARSP49588 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.074e-7■□□□□ 9.5
AARSP49588 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.614e-7■□□□□ 9.5
AARSP49588 COPA-205ENST00000541366 616 ntTSL 212.83□□□□□ -0.364e-7■□□□□ 9.5
AARSP49588 COPA-202ENST00000368069 4664 ntTSL 1 (best) BASIC12.36□□□□□ -0.434e-7■□□□□ 9.5
AARSP49588 COPA-201ENST00000241704 4789 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.54e-7■□□□□ 9.5
AARSP49588 HNRNPA3-202ENST00000411529 5688 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.694e-7■□□□□ 9.5
AARSP49588 HNRNPA3-203ENST00000432457 643 ntTSL 310.53□□□□□ -0.724e-7■□□□□ 9.5
AARSP49588 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.523e-6■□□□□ 9.5
AARSP49588 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.5■□□□□ 0.393e-6■□□□□ 9.5
AARSP49588 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.78■□□□□ 0.283e-6■□□□□ 9.5
AARSP49588 SMARCA4-219ENST00000592604 2940 ntTSL 1 (best)16.7■□□□□ 0.263e-6■□□□□ 9.5
AARSP49588 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.133e-6■□□□□ 9.5
AARSP49588 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.073e-6■□□□□ 9.5
AARSP49588 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.39□□□□□ -0.113e-6■□□□□ 9.5
AARSP49588 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.133e-6■□□□□ 9.5
AARSP49588 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC13.89□□□□□ -0.193e-6■□□□□ 9.5
AARSP49588 SMARCA4-217ENST00000591595 3377 ntTSL 213.72□□□□□ -0.213e-6■□□□□ 9.5
AARSP49588 SMARCA4-208ENST00000585799 3842 ntTSL 213.09□□□□□ -0.313e-6■□□□□ 9.5
AARSP49588 SMARCA4-218ENST00000592158 409 ntTSL 29.37□□□□□ -0.913e-6■□□□□ 9.5
AARSP49588 PPAN-204ENST00000444703 757 ntTSL 328.48■■■□□ 2.152e-7■□□□□ 9.5
AARSP49588 PPAN-208ENST00000486482 1017 ntTSL 227.44■■□□□ 1.982e-7■□□□□ 9.5
AARSP49588 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.5■■□□□ 1.832e-7■□□□□ 9.5
AARSP49588 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.692e-7■□□□□ 9.5
AARSP49588 EPB41L4A-AS1-202ENST00000427306 1367 ntTSL 225.47■■□□□ 1.672e-21■□□□□ 9.5
AARSP49588 AL355987.4-202ENST00000459985 1900 ntTSL 224.89■■□□□ 1.582e-7■□□□□ 9.5
AARSP49588 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.442e-7■□□□□ 9.5
AARSP49588 STX16-210ENST00000458280 553 ntTSL 423.87■■□□□ 1.412e-7■□□□□ 9.5
AARSP49588 LGALS1-202ENST00000425542 637 ntTSL 319.96■□□□□ 0.792e-7■□□□□ 9.5
AARSP49588 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.762e-7■□□□□ 9.5
AARSP49588 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.632e-7■□□□□ 9.5
AARSP49588 EPB41L4A-AS1-203ENST00000442823 578 ntTSL 218.89■□□□□ 0.612e-21■□□□□ 9.5
AARSP49588 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.56■□□□□ 0.562e-7■□□□□ 9.5
AARSP49588 STX16-208ENST00000412911 560 ntTSL 418.1■□□□□ 0.492e-7■□□□□ 9.5
AARSP49588 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.96■□□□□ 0.472e-21■□□□□ 9.5
AARSP49588 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.93■□□□□ 0.462e-7■□□□□ 9.5
AARSP49588 EPB41L4A-AS1-204ENST00000508590 292 ntTSL 317.62■□□□□ 0.412e-21■□□□□ 9.5
AARSP49588 STX16-217ENST00000490700 661 ntTSL 317.53■□□□□ 0.42e-7■□□□□ 9.5
AARSP49588 STX16-201ENST00000312283 785 ntTSL 316.97■□□□□ 0.312e-7■□□□□ 9.5
AARSP49588 STX16-215ENST00000476384 936 ntTSL 516.46■□□□□ 0.232e-7■□□□□ 9.5
AARSP49588 LGALS1-203ENST00000454173 331 ntTSL 515.75■□□□□ 0.112e-7■□□□□ 9.5
AARSP49588 STX16-216ENST00000483434 874 ntTSL 315.48■□□□□ 0.072e-7■□□□□ 9.5
AARSP49588 STX16-211ENST00000460655 572 ntTSL 414.39□□□□□ -0.112e-7■□□□□ 9.5
AARSP49588 LGALS1-204ENST00000464120 303 ntTSL 214.38□□□□□ -0.112e-7■□□□□ 9.5
AARSP49588 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.112e-7■□□□□ 9.5
AARSP49588 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.162e-7■□□□□ 9.5
AARSP49588 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC13.67□□□□□ -0.222e-7■□□□□ 9.5
AARSP49588 STX16-202ENST00000355957 4897 ntTSL 2 BASIC13.17□□□□□ -0.32e-7■□□□□ 9.5
AARSP49588 SUPT5H-217ENST00000599907 859 ntTSL 413.13□□□□□ -0.312e-7■□□□□ 9.5
AARSP49588 STX16-205ENST00000361830 4318 ntTSL 5 BASIC13.1□□□□□ -0.312e-7■□□□□ 9.5
AARSP49588 SUPT5H-201ENST00000359191 3770 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.332e-7■□□□□ 9.5
AARSP49588 SUPT5H-203ENST00000402194 3698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.372e-7■□□□□ 9.5
AARSP49588 STX16-220ENST00000496117 528 ntTSL 512.53□□□□□ -0.42e-7■□□□□ 9.5
AARSP49588 SUPT5H-213ENST00000598725 3742 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.472e-7■□□□□ 9.5
AARSP49588 SUPT5H-215ENST00000599117 3902 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.522e-7■□□□□ 9.5
AARSP49588 SUPT5H-204ENST00000432763 3710 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.582e-7■□□□□ 9.5
AARSP49588 STX16-204ENST00000359617 4273 ntTSL 5 BASIC11□□□□□ -0.652e-7■□□□□ 9.5
AARSP49588 KIAA0100-202ENST00000528896 7407 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.82e-7■□□□□ 9.5
AARSP49588 KIAA0100-216ENST00000583860 432 ntTSL 29.21□□□□□ -0.942e-7■□□□□ 9.5
AARSP49588 LGALS1-206ENST00000480207 185 ntTSL 58.96□□□□□ -0.982e-7■□□□□ 9.5
AARSP49588 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.032e-7■□□□□ 9.5
AARSP49588 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.072e-7■□□□□ 9.5
AARSP49588 SUPT5H-205ENST00000593727 493 ntTSL 37.43□□□□□ -1.222e-7■□□□□ 9.5
AARSP49588 TPR-208ENST00000492973 453 ntTSL 27.3□□□□□ -1.242e-7■□□□□ 9.5
AARSP49588 SNORA13-201ENST00000458790 133 ntBASIC-0.59□□□□□ -2.52e-21■□□□□ 9.5
AARSP49588 SNORD99-201ENST00000408612 74 ntBASIC0.91□□□□□ -2.263e-7■□□□□ 9.5
AARSP49588 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.451e-6■□□□□ 9.4
AARSP49588 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.361e-6■□□□□ 9.4
AARSP49588 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.321e-6■□□□□ 9.4
AARSP49588 ADD2-206ENST00000415348 930 ntTSL 516.6■□□□□ 0.251e-6■□□□□ 9.4
AARSP49588 ADD2-210ENST00000456320 997 ntTSL 516.6■□□□□ 0.251e-6■□□□□ 9.4
AARSP49588 TRIM24-206ENST00000497516 1515 ntTSL 515.53■□□□□ 0.081e-6■□□□□ 9.4
AARSP49588 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.021e-6■□□□□ 9.4
AARSP49588 ADD2-205ENST00000413157 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.521e-6■□□□□ 9.4
AARSP49588 ADD2-201ENST00000264436 9267 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.71e-6■□□□□ 9.4
AARSP49588 ADD2-203ENST00000403045 3745 ntTSL 210.54□□□□□ -0.721e-6■□□□□ 9.4
AARSP49588 ADD2-204ENST00000407644 3741 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.831e-6■□□□□ 9.4
AARSP49588 ADD2-214ENST00000522886 874 ntTSL 59.83□□□□□ -0.841e-6■□□□□ 9.4
AARSP49588 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.091e-323■□□□□ 9.4
AARSP49588 SET-204ENST00000372692 2850 ntTSL 1 (best) BASIC12.09□□□□□ -0.471e-323■□□□□ 9.4
AARSP49588 SET-202ENST00000372686 1029 ntTSL 24.66□□□□□ -1.661e-323■□□□□ 9.4
AARSP49588 EIF4A2-201ENST00000323963 1919 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.711e-10■□□□□ 9.4
AARSP49588 EIF4A2-203ENST00000426808 1751 ntTSL 1 (best)8.05□□□□□ -1.121e-10■□□□□ 9.4
AARSP49588 EIF4A2-207ENST00000443963 1729 ntTSL 1 (best)7.27□□□□□ -1.251e-10■□□□□ 9.4
AARSP49588 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.291e-10■□□□□ 9.4
AARSP49588 EIF4A2-202ENST00000425053 1977 ntTSL 56.83□□□□□ -1.321e-10■□□□□ 9.4
AARSP49588 EIF4A2-218ENST00000475653 909 ntTSL 26.67□□□□□ -1.341e-10■□□□□ 9.4
AARSP49588 EIF4A2-204ENST00000429589 1005 ntTSL 56.56□□□□□ -1.361e-10■□□□□ 9.4
AARSP49588 EIF4A2-219ENST00000485101 5327 ntTSL 54.78□□□□□ -1.641e-10■□□□□ 9.4
Retrieved 100 of 8,200 protein–RNA pairs in 400.4 ms