RNA–Protein interactions for RNA: ENST00000359191.10

SUPT5H-201, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SUPT5H, Length 3,770 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-201ENST00000359191 NISCHQ9Y2I1 1504 aa22.51■■□□□ 1.19
SUPT5H-201ENST00000359191 SHROOM4Q9ULL8 1493 aa19.87■□□□□ 0.77
SUPT5H-201ENST00000359191 SUPT5HO00267 1087 aaKnown RBP19.78■□□□□ 0.76
SUPT5H-201ENST00000359191 DCAF8L2P0C7V8 631 aa19.57■□□□□ 0.72
SUPT5H-201ENST00000359191 HRCP23327 699 aa19.29■□□□□ 0.68
SUPT5H-201ENST00000359191 PCGF6Q9BYE7 350 aa19.22■□□□□ 0.67
SUPT5H-201ENST00000359191 CHIC1Q5VXU3 224 aa19.12■□□□□ 0.65
SUPT5H-201ENST00000359191 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
SUPT5H-201ENST00000359191 PPARGC1BQ86YN6 1023 aaKnown RBP18.97■□□□□ 0.63
SUPT5H-201ENST00000359191 MYO15BQ96JP2 1530 aa18.96■□□□□ 0.63
SUPT5H-201ENST00000359191 ZCCHC6Q5VYS8 1495 aaKnown RBP18.88■□□□□ 0.61
SUPT5H-201ENST00000359191 LOC105371045A0A1W2PR82 267 aa18.75■□□□□ 0.59
SUPT5H-201ENST00000359191 TRIM26Q12899 539 aaPredicted RBP18.59■□□□□ 0.57
SUPT5H-201ENST00000359191 ABCC9O60706 1549 aa18.54■□□□□ 0.56
SUPT5H-201ENST00000359191 DCAF1Q9Y4B6 1507 aa18.54■□□□□ 0.56
SUPT5H-201ENST00000359191 ZEB1P37275 1124 aaPredicted RBP18.4■□□□□ 0.54
SUPT5H-201ENST00000359191 EHMT2Q96KQ7 1210 aa18.36■□□□□ 0.53
SUPT5H-201ENST00000359191 FAM9AQ8IZU1 332 aaPredicted RBP18.35■□□□□ 0.53
SUPT5H-201ENST00000359191 PELP1Q8IZL8 1130 aaKnown RBP18.29■□□□□ 0.52
SUPT5H-201ENST00000359191 TRIM41Q8WV44 630 aa18.29■□□□□ 0.52
SUPT5H-201ENST00000359191 SCRIBQ14160 1630 aa18.16■□□□□ 0.5
SUPT5H-201ENST00000359191 SCAF1Q9H7N4 1312 aaKnown RBP18.07■□□□□ 0.48
SUPT5H-201ENST00000359191 CCER1Q8TC90 406 aaPredicted RBP17.97■□□□□ 0.47
SUPT5H-201ENST00000359191 NACADO15069 1562 aa17.94■□□□□ 0.46
SUPT5H-201ENST00000359191 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.9■□□□□ 0.46
SUPT5H-201ENST00000359191 RSF1Q96T23 1441 aaPredicted RBP17.88■□□□□ 0.45
SUPT5H-201ENST00000359191 TTBK1Q5TCY1 1321 aaPredicted RBP17.85■□□□□ 0.45
SUPT5H-201ENST00000359191 PABPN1Q86U42 306 aaKnown RBP eCLIP17.81■□□□□ 0.448e-7■■■□□ 17.8
SUPT5H-201ENST00000359191 CENPBP07199 599 aaPredicted RBP17.81■□□□□ 0.44
SUPT5H-201ENST00000359191 RB1CC1Q8TDY2 1594 aa17.8■□□□□ 0.44
SUPT5H-201ENST00000359191 ACIN1Q9UKV3 1341 aaKnown RBP17.79■□□□□ 0.44
SUPT5H-201ENST00000359191 NEUROD1Q13562 356 aa17.74■□□□□ 0.43
SUPT5H-201ENST00000359191 DIEXFQ68CQ4 756 aaKnown RBP17.74■□□□□ 0.43
SUPT5H-201ENST00000359191 GTF3C3Q9Y5Q9 886 aa17.71■□□□□ 0.43
SUPT5H-201ENST00000359191 CECR2Q9BXF3 1484 aa17.68■□□□□ 0.42
SUPT5H-201ENST00000359191 YTHDC1Q96MU7 727 aaKnown RBP17.58■□□□□ 0.4
SUPT5H-201ENST00000359191 MYT1Q01538 1121 aa17.52■□□□□ 0.39
SUPT5H-201ENST00000359191 MROH2BQ7Z745 1585 aa17.51■□□□□ 0.39
SUPT5H-201ENST00000359191 UBTFP17480 764 aaKnown RBP17.48■□□□□ 0.39
SUPT5H-201ENST00000359191 ZNF316A6NFI3 1004 aaPredicted RBP17.43■□□□□ 0.38
SUPT5H-201ENST00000359191 WIZO95785 1651 aa17.36■□□□□ 0.37
SUPT5H-201ENST00000359191 BAZ1AQ9NRL2 1556 aaPredicted RBP17.35■□□□□ 0.37
SUPT5H-201ENST00000359191 HNRNPUL2Q1KMD3 747 aaKnown RBP17.35■□□□□ 0.37
SUPT5H-201ENST00000359191 CEP162Q5TB80 1403 aa17.3■□□□□ 0.36
SUPT5H-201ENST00000359191 APLP2Q06481 763 aa17.26■□□□□ 0.35
SUPT5H-201ENST00000359191 CSRNP3Q8WYN3 585 aa17.25■□□□□ 0.35
SUPT5H-201ENST00000359191 MIER1Q8N108 512 aa17.25■□□□□ 0.35
SUPT5H-201ENST00000359191 RANGAP1P46060 587 aaPredicted RBP17.22■□□□□ 0.35
SUPT5H-201ENST00000359191 UNC13AQ9UPW8 1703 aa17.21■□□□□ 0.35
SUPT5H-201ENST00000359191 WRNQ14191 1432 aaPredicted RBP eCLIP17.19■□□□□ 0.349e-6■■■■■ 50.1
SUPT5H-201ENST00000359191 CCDC88BA6NC98 1476 aa17.19■□□□□ 0.34
SUPT5H-201ENST00000359191 TNIKQ9UKE5 1360 aa17.18■□□□□ 0.34
SUPT5H-201ENST00000359191 ABCC8Q09428 1581 aa17.18■□□□□ 0.34
SUPT5H-201ENST00000359191 SMARCA4P51532 1647 aa17.17■□□□□ 0.34
SUPT5H-201ENST00000359191 SOGA1O94964 1423 aa17.17■□□□□ 0.34
SUPT5H-201ENST00000359191 BICRAQ9NZM4 1560 aa17.14■□□□□ 0.33
SUPT5H-201ENST00000359191 TOP2AP11388 1531 aaKnown RBP17.06■□□□□ 0.32
SUPT5H-201ENST00000359191 EEA1Q15075 1411 aa17.04■□□□□ 0.32
SUPT5H-201ENST00000359191 GOLGA3Q08378 1498 aa17.02■□□□□ 0.32
SUPT5H-201ENST00000359191 RUSC2Q8N2Y8 1516 aa17.01■□□□□ 0.31
SUPT5H-201ENST00000359191 BAZ1BQ9UIG0 1483 aaKnown RBP16.99■□□□□ 0.31
SUPT5H-201ENST00000359191 CLIP1P30622 1438 aa16.95■□□□□ 0.3
SUPT5H-201ENST00000359191 ATAD2BQ9ULI0 1458 aa16.94■□□□□ 0.3
SUPT5H-201ENST00000359191 SMARCA2P51531 1590 aa16.93■□□□□ 0.3
SUPT5H-201ENST00000359191 EIF4G1Q04637 1599 aaKnown RBP16.93■□□□□ 0.3
SUPT5H-201ENST00000359191 CEP164Q9UPV0 1460 aa16.87■□□□□ 0.29
SUPT5H-201ENST00000359191 SUPT16HQ9Y5B9 1047 aaKnown RBP16.84■□□□□ 0.29
SUPT5H-201ENST00000359191 ITGAEP38570 1179 aa16.83■□□□□ 0.29
SUPT5H-201ENST00000359191 CLSPNQ9HAW4 1339 aa16.83■□□□□ 0.29
SUPT5H-201ENST00000359191 VPS8Q8N3P4 1428 aa16.82■□□□□ 0.28
SUPT5H-201ENST00000359191 BCANQ96GW7 911 aa16.75■□□□□ 0.27
SUPT5H-201ENST00000359191 PEG3Q9GZU2 1588 aa16.69■□□□□ 0.26
SUPT5H-201ENST00000359191 RAPGEF2Q9Y4G8 1499 aa16.69■□□□□ 0.26
SUPT5H-201ENST00000359191 DHX57Q6P158 1386 aaKnown RBP16.69■□□□□ 0.26
SUPT5H-201ENST00000359191 TSHZ2Q9NRE2 1034 aa16.66■□□□□ 0.26
SUPT5H-201ENST00000359191 NEFLP07196 543 aa16.65■□□□□ 0.26
SUPT5H-201ENST00000359191 KANK4Q5T7N3 995 aaPredicted RBP16.64■□□□□ 0.26
SUPT5H-201ENST00000359191 NCAPD3P42695 1498 aa16.64■□□□□ 0.25
SUPT5H-201ENST00000359191 KIF21BO75037 1637 aa16.62■□□□□ 0.25
SUPT5H-201ENST00000359191 ANP32EQ9BTT0 268 aa16.61■□□□□ 0.25
SUPT5H-201ENST00000359191 FKBP8Q14318 412 aa16.61■□□□□ 0.25
SUPT5H-201ENST00000359191 SYNJ1O43426 1573 aa16.6■□□□□ 0.25
SUPT5H-201ENST00000359191 KCNH8Q96L42 1107 aa16.59■□□□□ 0.25
SUPT5H-201ENST00000359191 DDX10Q13206 875 aaKnown RBP16.58■□□□□ 0.24
SUPT5H-201ENST00000359191 ATP1B4Q9UN42 357 aaPredicted RBP16.54■□□□□ 0.24
SUPT5H-201ENST00000359191 CCNB3Q8WWL7 1395 aa16.51■□□□□ 0.23
SUPT5H-201ENST00000359191 FAM50AQ14320 339 aaKnown RBP16.51■□□□□ 0.23
SUPT5H-201ENST00000359191 HMGXB3Q12766 1538 aa16.51■□□□□ 0.23
SUPT5H-201ENST00000359191 TRIM52Q96A61 297 aa16.47■□□□□ 0.23
SUPT5H-201ENST00000359191 HIRIP3Q9BW71 556 aaPredicted RBP16.46■□□□□ 0.23
SUPT5H-201ENST00000359191 CC2D2AQ9P2K1 1620 aa16.45■□□□□ 0.22
SUPT5H-201ENST00000359191 ANP32CO43423 234 aa16.45■□□□□ 0.22
SUPT5H-201ENST00000359191 CADPSQ9ULU8 1353 aa16.44■□□□□ 0.22
SUPT5H-201ENST00000359191 SIN3AQ96ST3 1273 aa16.43■□□□□ 0.22
SUPT5H-201ENST00000359191 RAB3GAP2Q9H2M9 1393 aa16.42■□□□□ 0.22
SUPT5H-201ENST00000359191 ARAP1Q96P48 1450 aa16.41■□□□□ 0.22
SUPT5H-201ENST00000359191 CFTRP13569 1480 aa16.4■□□□□ 0.22
SUPT5H-201ENST00000359191 RRBP1Q9P2E9 1410 aaKnown RBP16.39■□□□□ 0.21
SUPT5H-201ENST00000359191 ERICH6Q7L0X2 663 aa16.38■□□□□ 0.21
SUPT5H-201ENST00000359191 KIF27Q86VH2 1401 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms