RNA–Protein interactions for RNA: ENST00000587838.1

SNHG16-206, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 3

Gene SNHG16, Length 884 nt, Biotype lincRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-206ENST00000587838 AEBP2Q6ZN18 517 aaPredicted RBP16.33■□□□□ 0.2
SNHG16-206ENST00000587838 DNAJC5BQ9UF47 199 aa15.71■□□□□ 0.11
SNHG16-206ENST00000587838 CHIC1Q5VXU3 224 aa15.51■□□□□ 0.07
SNHG16-206ENST00000587838 DNAJC5Q9H3Z4 198 aa15.5■□□□□ 0.07
SNHG16-206ENST00000587838 ABCC9O60706 1549 aa15.32■□□□□ 0.04
SNHG16-206ENST00000587838 NISCHQ9Y2I1 1504 aa14.68□□□□□ -0.06
SNHG16-206ENST00000587838 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
SNHG16-206ENST00000587838 PABPN1Q86U42 306 aaKnown RBP eCLIP13.96□□□□□ -0.17
SNHG16-206ENST00000587838 CECR2Q9BXF3 1484 aa13.95□□□□□ -0.18
SNHG16-206ENST00000587838 RB1CC1Q8TDY2 1594 aa13.92□□□□□ -0.18
SNHG16-206ENST00000587838 CCDC180Q9P1Z9 1646 aa13.91□□□□□ -0.18
SNHG16-206ENST00000587838 SENP3Q9H4L4 574 aaPredicted RBP13.85□□□□□ -0.19
SNHG16-206ENST00000587838 CUX2O14529 1486 aa13.81□□□□□ -0.2
SNHG16-206ENST00000587838 CC2D2AQ9P2K1 1620 aa13.81□□□□□ -0.2
SNHG16-206ENST00000587838 UNC13AQ9UPW8 1703 aa13.77□□□□□ -0.21
SNHG16-206ENST00000587838 PHF23Q9BUL5 403 aaPredicted RBP13.7□□□□□ -0.22
SNHG16-206ENST00000587838 BICRAQ9NZM4 1560 aa13.63□□□□□ -0.23
SNHG16-206ENST00000587838 ILDR1Q86SU0 546 aaPredicted RBP13.58□□□□□ -0.24
SNHG16-206ENST00000587838 NACADO15069 1562 aa13.45□□□□□ -0.26
SNHG16-206ENST00000587838 EIF4G1Q04637 1599 aaKnown RBP13.4□□□□□ -0.26
SNHG16-206ENST00000587838 ERCC6Q03468 1493 aa13.3□□□□□ -0.28
SNHG16-206ENST00000587838 SHROOM4Q9ULL8 1493 aa13.22□□□□□ -0.29
SNHG16-206ENST00000587838 TRHP20396 242 aaPredicted RBP13.01□□□□□ -0.33
SNHG16-206ENST00000587838 RIMBP3CA6NJZ7 1639 aa13□□□□□ -0.33
SNHG16-206ENST00000587838 RIMBP3BA6NNM3 1639 aa13□□□□□ -0.33
SNHG16-206ENST00000587838 RIMBP3Q9UFD9 1639 aa13□□□□□ -0.33
SNHG16-206ENST00000587838 THOC2Q8NI27 1593 aaKnown RBP12.98□□□□□ -0.33
SNHG16-206ENST00000587838 FOXD1Q16676 465 aa12.95□□□□□ -0.34
SNHG16-206ENST00000587838 DCAF8L2P0C7V8 631 aa12.94□□□□□ -0.34
SNHG16-206ENST00000587838 BAZ1AQ9NRL2 1556 aaPredicted RBP12.92□□□□□ -0.34
SNHG16-206ENST00000587838 OSCARQ8IYS5 282 aa12.86□□□□□ -0.35
SNHG16-206ENST00000587838 ARHGEF11O15085 1522 aa12.77□□□□□ -0.37
SNHG16-206ENST00000587838 LMTK3Q96Q04 1460 aa12.76□□□□□ -0.37
SNHG16-206ENST00000587838 NESP48681 1621 aa12.75□□□□□ -0.37
SNHG16-206ENST00000587838 MYO15BQ96JP2 1530 aa12.74□□□□□ -0.37
SNHG16-206ENST00000587838 SOCS7O14512 581 aa12.73□□□□□ -0.37
SNHG16-206ENST00000587838 SMARCA2P51531 1590 aa12.69□□□□□ -0.38
SNHG16-206ENST00000587838 CYB5RLQ6IPT4 315 aa12.68□□□□□ -0.38
SNHG16-206ENST00000587838 KIF21AQ7Z4S6 1674 aa12.62□□□□□ -0.39
SNHG16-206ENST00000587838 SCRIBQ14160 1630 aa12.62□□□□□ -0.39
SNHG16-206ENST00000587838 ILDR2Q71H61 639 aa12.58□□□□□ -0.4
SNHG16-206ENST00000587838 FBXO41Q8TF61 875 aa12.56□□□□□ -0.4
SNHG16-206ENST00000587838 ARAP1Q96P48 1450 aa12.53□□□□□ -0.4
SNHG16-206ENST00000587838 ERCC6L2Q5T890 1561 aa12.52□□□□□ -0.41
SNHG16-206ENST00000587838 KDM4FA0A1W2PPD8 638 aa12.42□□□□□ -0.42
SNHG16-206ENST00000587838 NCAPD3P42695 1498 aa12.41□□□□□ -0.42
SNHG16-206ENST00000587838 LAMC3Q9Y6N6 1575 aa12.41□□□□□ -0.42
SNHG16-206ENST00000587838 WDR62O43379 1518 aa12.41□□□□□ -0.42
SNHG16-206ENST00000587838 PLPPR3Q6T4P5 718 aa12.39□□□□□ -0.43
SNHG16-206ENST00000587838 HECW2Q9P2P5 1572 aa12.35□□□□□ -0.43
SNHG16-206ENST00000587838 MRC2Q9UBG0 1479 aa12.34□□□□□ -0.43
SNHG16-206ENST00000587838 DISP3Q9P2K9 1392 aa12.33□□□□□ -0.44
SNHG16-206ENST00000587838 PDS5BQ9NTI5 1447 aa12.32□□□□□ -0.44
SNHG16-206ENST00000587838 HMGXB3Q12766 1538 aa12.22□□□□□ -0.45
SNHG16-206ENST00000587838 RSF1Q96T23 1441 aaPredicted RBP12.19□□□□□ -0.46
SNHG16-206ENST00000587838 PPP6R1Q9UPN7 881 aa12.17□□□□□ -0.46
SNHG16-206ENST00000587838 ATAD2BQ9ULI0 1458 aa12.16□□□□□ -0.46
SNHG16-206ENST00000587838 SYNJ2O15056 1496 aa12.13□□□□□ -0.47
SNHG16-206ENST00000587838 SPATA31D1Q6ZQQ2 1576 aa12.13□□□□□ -0.47
SNHG16-206ENST00000587838 CHD1O14646 1710 aa12.11□□□□□ -0.47
SNHG16-206ENST00000587838 ADRA2BP18089 450 aa12.11□□□□□ -0.47
SNHG16-206ENST00000587838 KIF13AQ9H1H9 1805 aa12.1□□□□□ -0.47
SNHG16-206ENST00000587838 PIAS4Q8N2W9 510 aaPredicted RBP12.08□□□□□ -0.48
SNHG16-206ENST00000587838 MSH5O43196 834 aa12.04□□□□□ -0.48
SNHG16-206ENST00000587838 DCAF1Q9Y4B6 1507 aa12.03□□□□□ -0.48
SNHG16-206ENST00000587838 SMARCA4P51532 1647 aa12□□□□□ -0.49
SNHG16-206ENST00000587838 ADGRL1O94910 1474 aa11.99□□□□□ -0.49
SNHG16-206ENST00000587838 CEP164Q9UPV0 1460 aa11.99□□□□□ -0.49
SNHG16-206ENST00000587838 ZNF608Q9ULD9 1512 aaPredicted RBP11.96□□□□□ -0.49
SNHG16-206ENST00000587838 BAZ1BQ9UIG0 1483 aaKnown RBP11.96□□□□□ -0.49
SNHG16-206ENST00000587838 KDM6BO15054 1643 aa11.93□□□□□ -0.5
SNHG16-206ENST00000587838 CADPSQ9ULU8 1353 aa11.92□□□□□ -0.5
SNHG16-206ENST00000587838 CLASP1Q7Z460 1538 aa11.87□□□□□ -0.51
SNHG16-206ENST00000587838 EIF4G3O43432 1585 aaKnown RBP11.87□□□□□ -0.51
SNHG16-206ENST00000587838 URB2Q14146 1524 aaKnown RBP11.86□□□□□ -0.51
SNHG16-206ENST00000587838 ZCCHC6Q5VYS8 1495 aaKnown RBP11.85□□□□□ -0.51
SNHG16-206ENST00000587838 GAPVD1Q14C86 1478 aa11.83□□□□□ -0.52
SNHG16-206ENST00000587838 FANCD2Q9BXW9 1451 aa11.83□□□□□ -0.52
SNHG16-206ENST00000587838 FBLN2P98095 1184 aa11.8□□□□□ -0.52
SNHG16-206ENST00000587838 IFT140Q96RY7 1462 aa11.79□□□□□ -0.52
SNHG16-206ENST00000587838 PEG3Q9GZU2 1588 aa11.71□□□□□ -0.53
SNHG16-206ENST00000587838 POTEDQ86YR6 584 aa11.71□□□□□ -0.53
SNHG16-206ENST00000587838 TSPOAP1O95153 1857 aa11.71□□□□□ -0.53
SNHG16-206ENST00000587838 CERKQ8TCT0 537 aa11.7□□□□□ -0.54
SNHG16-206ENST00000587838 SYNJ1O43426 1573 aa11.69□□□□□ -0.54
SNHG16-206ENST00000587838 ABCC10Q5T3U5 1492 aa11.66□□□□□ -0.54
SNHG16-206ENST00000587838 FAM69CQ0P6D2 419 aa11.66□□□□□ -0.54
SNHG16-206ENST00000587838 DIP2BQ9P265 1576 aa11.65□□□□□ -0.54
SNHG16-206ENST00000587838 AQRO60306 1485 aaKnown RBP eCLIP11.63□□□□□ -0.551e-9■■■■□ 20.5
SNHG16-206ENST00000587838 TOP2BQ02880 1626 aa11.6□□□□□ -0.55
SNHG16-206ENST00000587838 TARBP1Q13395 1621 aaKnown RBP11.53□□□□□ -0.56
SNHG16-206ENST00000587838 CFTRP13569 1480 aa11.51□□□□□ -0.57
SNHG16-206ENST00000587838 MAPKBP1O60336 1514 aa11.5□□□□□ -0.57
SNHG16-206ENST00000587838 PCF11O94913 1555 aaKnown RBP11.5□□□□□ -0.57
SNHG16-206ENST00000587838 SRCAPQ6ZRS2 3230 aa11.48□□□□□ -0.57
SNHG16-206ENST00000587838 SNAPC4Q5SXM2 1469 aa11.48□□□□□ -0.57
SNHG16-206ENST00000587838 TOPBP1Q92547 1522 aa11.45□□□□□ -0.58
SNHG16-206ENST00000587838 CHMP7Q8WUX9 453 aaPredicted RBP11.45□□□□□ -0.58
SNHG16-206ENST00000587838 PPRC1Q5VV67 1664 aaKnown RBP11.43□□□□□ -0.58
SNHG16-206ENST00000587838 PRDM2Q13029 1718 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms