RNA–Protein interactions for RNA: ENST00000599907.1

SUPT5H-217, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 4

Gene SUPT5H, Length 859 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-217ENST00000599907 NISCHQ9Y2I1 1504 aa28.47■■■□□ 2.15
SUPT5H-217ENST00000599907 CCDC180Q9P1Z9 1646 aa25.01■■□□□ 1.59
SUPT5H-217ENST00000599907 ABCC9O60706 1549 aa23.94■■□□□ 1.42
SUPT5H-217ENST00000599907 ZCCHC6Q5VYS8 1495 aaKnown RBP23.88■■□□□ 1.41
SUPT5H-217ENST00000599907 DCAF1Q9Y4B6 1507 aa23.59■■□□□ 1.37
SUPT5H-217ENST00000599907 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
SUPT5H-217ENST00000599907 MYO15BQ96JP2 1530 aa23.39■■□□□ 1.34
SUPT5H-217ENST00000599907 NACADO15069 1562 aa23.3■■□□□ 1.32
SUPT5H-217ENST00000599907 RB1CC1Q8TDY2 1594 aa23.15■■□□□ 1.3
SUPT5H-217ENST00000599907 SHROOM4Q9ULL8 1493 aa22.99■■□□□ 1.27
SUPT5H-217ENST00000599907 SCRIBQ14160 1630 aa22.89■■□□□ 1.25
SUPT5H-217ENST00000599907 UNC13AQ9UPW8 1703 aa22.68■■□□□ 1.22
SUPT5H-217ENST00000599907 DNAJC5BQ9UF47 199 aa22.53■■□□□ 1.2
SUPT5H-217ENST00000599907 BICRAQ9NZM4 1560 aa22.42■■□□□ 1.18
SUPT5H-217ENST00000599907 PABPN1Q86U42 306 aaKnown RBP eCLIP22.3■■□□□ 1.163e-6■■□□□ 13.3
SUPT5H-217ENST00000599907 CECR2Q9BXF3 1484 aa22.09■■□□□ 1.13
SUPT5H-217ENST00000599907 BAZ1AQ9NRL2 1556 aaPredicted RBP22.03■■□□□ 1.12
SUPT5H-217ENST00000599907 SUPT5HO00267 1087 aaKnown RBP22.02■■□□□ 1.12
SUPT5H-217ENST00000599907 RSF1Q96T23 1441 aaPredicted RBP21.97■■□□□ 1.11
SUPT5H-217ENST00000599907 MROH2BQ7Z745 1585 aa21.97■■□□□ 1.11
SUPT5H-217ENST00000599907 SMARCA4P51532 1647 aa21.95■■□□□ 1.1
SUPT5H-217ENST00000599907 WIZO95785 1651 aa21.79■■□□□ 1.08
SUPT5H-217ENST00000599907 EIF4G1Q04637 1599 aaKnown RBP21.76■■□□□ 1.07
SUPT5H-217ENST00000599907 PEG3Q9GZU2 1588 aa21.7■■□□□ 1.06
SUPT5H-217ENST00000599907 SMARCA2P51531 1590 aa21.64■■□□□ 1.05
SUPT5H-217ENST00000599907 ATAD2BQ9ULI0 1458 aa21.61■■□□□ 1.05
SUPT5H-217ENST00000599907 TOP2AP11388 1531 aaKnown RBP21.6■■□□□ 1.05
SUPT5H-217ENST00000599907 CC2D2AQ9P2K1 1620 aa21.58■■□□□ 1.05
SUPT5H-217ENST00000599907 BAZ1BQ9UIG0 1483 aaKnown RBP21.5■■□□□ 1.03
SUPT5H-217ENST00000599907 NCAPD3P42695 1498 aa21.47■■□□□ 1.03
SUPT5H-217ENST00000599907 HMGXB3Q12766 1538 aa21.46■■□□□ 1.03
SUPT5H-217ENST00000599907 CCDC88BA6NC98 1476 aa21.32■■□□□ 1
SUPT5H-217ENST00000599907 CHIC1Q5VXU3 224 aa21■□□□□ 0.95
SUPT5H-217ENST00000599907 CFTRP13569 1480 aa20.93■□□□□ 0.94
SUPT5H-217ENST00000599907 PRDM2Q13029 1718 aa20.91■□□□□ 0.94
SUPT5H-217ENST00000599907 CADPSQ9ULU8 1353 aa20.89■□□□□ 0.93
SUPT5H-217ENST00000599907 DNAJC5Q9H3Z4 198 aa20.84■□□□□ 0.93
SUPT5H-217ENST00000599907 ABCC8Q09428 1581 aa20.8■□□□□ 0.92
SUPT5H-217ENST00000599907 LAMC3Q9Y6N6 1575 aa20.8■□□□□ 0.92
SUPT5H-217ENST00000599907 TRIM41Q8WV44 630 aa20.75■□□□□ 0.91
SUPT5H-217ENST00000599907 NESP48681 1621 aa20.75■□□□□ 0.91
SUPT5H-217ENST00000599907 ERCC6Q03468 1493 aa20.72■□□□□ 0.91
SUPT5H-217ENST00000599907 WRNQ14191 1432 aaPredicted RBP eCLIP20.71■□□□□ 0.919e-6■■■■■ 50.1
SUPT5H-217ENST00000599907 CUX2O14529 1486 aa20.7■□□□□ 0.9
SUPT5H-217ENST00000599907 FANCD2Q9BXW9 1451 aa20.67■□□□□ 0.9
SUPT5H-217ENST00000599907 SYNJ1O43426 1573 aa20.64■□□□□ 0.9
SUPT5H-217ENST00000599907 PDS5BQ9NTI5 1447 aa20.62■□□□□ 0.89
SUPT5H-217ENST00000599907 BIVM-ERCC5R4GMW8 1640 aa20.6■□□□□ 0.89
SUPT5H-217ENST00000599907 TOP2BQ02880 1626 aa20.6■□□□□ 0.89
SUPT5H-217ENST00000599907 CEP164Q9UPV0 1460 aa20.57■□□□□ 0.88
SUPT5H-217ENST00000599907 CUX1P39880 1505 aa20.57■□□□□ 0.88
SUPT5H-217ENST00000599907 KIF21AQ7Z4S6 1674 aa20.56■□□□□ 0.88
SUPT5H-217ENST00000599907 DNMBPQ6XZF7 1577 aa20.48■□□□□ 0.87
SUPT5H-217ENST00000599907 TOPBP1Q92547 1522 aa20.43■□□□□ 0.86
SUPT5H-217ENST00000599907 URB2Q14146 1524 aaKnown RBP20.42■□□□□ 0.86
SUPT5H-217ENST00000599907 MRC2Q9UBG0 1479 aa20.38■□□□□ 0.85
SUPT5H-217ENST00000599907 FGD5Q6ZNL6 1462 aa20.37■□□□□ 0.85
SUPT5H-217ENST00000599907 SOGA1O94964 1423 aa20.35■□□□□ 0.85
SUPT5H-217ENST00000599907 EEA1Q15075 1411 aa20.35■□□□□ 0.85
SUPT5H-217ENST00000599907 FAM9AQ8IZU1 332 aaPredicted RBP20.32■□□□□ 0.84
SUPT5H-217ENST00000599907 POLA1P09884 1462 aaPredicted RBP20.3■□□□□ 0.84
SUPT5H-217ENST00000599907 WDR62O43379 1518 aa20.29■□□□□ 0.84
SUPT5H-217ENST00000599907 THOC2Q8NI27 1593 aaKnown RBP20.29■□□□□ 0.84
SUPT5H-217ENST00000599907 RUSC2Q8N2Y8 1516 aa20.27■□□□□ 0.84
SUPT5H-217ENST00000599907 KIF27Q86VH2 1401 aa20.22■□□□□ 0.83
SUPT5H-217ENST00000599907 RAD54L2Q9Y4B4 1467 aa20.21■□□□□ 0.83
SUPT5H-217ENST00000599907 ABCA10Q8WWZ4 1543 aa20.21■□□□□ 0.83
SUPT5H-217ENST00000599907 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
SUPT5H-217ENST00000599907 CSRNP3Q8WYN3 585 aa20.19■□□□□ 0.82
SUPT5H-217ENST00000599907 TARBP1Q13395 1621 aaKnown RBP20.16■□□□□ 0.82
SUPT5H-217ENST00000599907 LOC105371045A0A1W2PR82 267 aa20.14■□□□□ 0.81
SUPT5H-217ENST00000599907 IFT140Q96RY7 1462 aa20.11■□□□□ 0.81
SUPT5H-217ENST00000599907 KIF21BO75037 1637 aa20.1■□□□□ 0.81
SUPT5H-217ENST00000599907 ABCA5Q8WWZ7 1642 aa20.08■□□□□ 0.8
SUPT5H-217ENST00000599907 GOLGA3Q08378 1498 aa20.04■□□□□ 0.8
SUPT5H-217ENST00000599907 IGF1RP08069 1367 aa20.02■□□□□ 0.8
SUPT5H-217ENST00000599907 TDRD9Q8NDG6 1382 aaKnown RBP20.02■□□□□ 0.8
SUPT5H-217ENST00000599907 GAPVD1Q14C86 1478 aa20.02■□□□□ 0.8
SUPT5H-217ENST00000599907 PRXQ9BXM0 1461 aa20.02■□□□□ 0.8
SUPT5H-217ENST00000599907 EHMT2Q96KQ7 1210 aa20.01■□□□□ 0.79
SUPT5H-217ENST00000599907 ERICH3Q5RHP9 1530 aa20■□□□□ 0.79
SUPT5H-217ENST00000599907 CUL7Q14999 1698 aa19.97■□□□□ 0.79
SUPT5H-217ENST00000599907 PBRM1Q86U86 1689 aa19.97■□□□□ 0.79
SUPT5H-217ENST00000599907 RAPGEF2Q9Y4G8 1499 aa19.96■□□□□ 0.79
SUPT5H-217ENST00000599907 ZNF608Q9ULD9 1512 aaPredicted RBP19.95■□□□□ 0.78
SUPT5H-217ENST00000599907 CARMIL1Q5VZK9 1371 aa19.94■□□□□ 0.78
SUPT5H-217ENST00000599907 AQRO60306 1485 aaKnown RBP eCLIP19.93■□□□□ 0.784e-7■■■■□ 19.3
SUPT5H-217ENST00000599907 EIF4G3O43432 1585 aaKnown RBP19.93■□□□□ 0.78
SUPT5H-217ENST00000599907 TNIKQ9UKE5 1360 aa19.92■□□□□ 0.78
SUPT5H-217ENST00000599907 UBTFP17480 764 aaKnown RBP19.9■□□□□ 0.78
SUPT5H-217ENST00000599907 GRIN2BQ13224 1484 aa19.9■□□□□ 0.78
SUPT5H-217ENST00000599907 ADAMTS12P58397 1594 aa19.83■□□□□ 0.77
SUPT5H-217ENST00000599907 FHAD1B1AJZ9 1412 aa19.8■□□□□ 0.76
SUPT5H-217ENST00000599907 OSCARQ8IYS5 282 aa19.8■□□□□ 0.76
SUPT5H-217ENST00000599907 CEP162Q5TB80 1403 aa19.78■□□□□ 0.76
SUPT5H-217ENST00000599907 SNAPC4Q5SXM2 1469 aa19.78■□□□□ 0.76
SUPT5H-217ENST00000599907 MAGI1Q96QZ7 1491 aaPredicted RBP19.77■□□□□ 0.76
SUPT5H-217ENST00000599907 CTTNBP2Q8WZ74 1663 aa19.73■□□□□ 0.75
SUPT5H-217ENST00000599907 CLIP1P30622 1438 aa19.68■□□□□ 0.74
SUPT5H-217ENST00000599907 SYNJ2O15056 1496 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms