RNA–Protein interactions for RNA: ENST00000586942.5

SNHG16-204, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 4 BASIC

Gene SNHG16, Length 568 nt, Biotype lincRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-204ENST00000586942 NISCHQ9Y2I1 1504 aa24.26■■□□□ 1.47
SNHG16-204ENST00000586942 CCDC180Q9P1Z9 1646 aa21.4■■□□□ 1.02
SNHG16-204ENST00000586942 ZCCHC6Q5VYS8 1495 aaKnown RBP20.32■□□□□ 0.84
SNHG16-204ENST00000586942 ABCC9O60706 1549 aa20.31■□□□□ 0.84
SNHG16-204ENST00000586942 DCAF1Q9Y4B6 1507 aa20.23■□□□□ 0.83
SNHG16-204ENST00000586942 MYO15BQ96JP2 1530 aa20.18■□□□□ 0.82
SNHG16-204ENST00000586942 NACADO15069 1562 aa20■□□□□ 0.79
SNHG16-204ENST00000586942 RB1CC1Q8TDY2 1594 aa19.86■□□□□ 0.77
SNHG16-204ENST00000586942 DCAF8L2P0C7V8 631 aa19.77■□□□□ 0.76
SNHG16-204ENST00000586942 SCRIBQ14160 1630 aa19.38■□□□□ 0.69
SNHG16-204ENST00000586942 UNC13AQ9UPW8 1703 aa19.38■□□□□ 0.69
SNHG16-204ENST00000586942 BICRAQ9NZM4 1560 aa19.28■□□□□ 0.68
SNHG16-204ENST00000586942 SHROOM4Q9ULL8 1493 aa19.24■□□□□ 0.67
SNHG16-204ENST00000586942 PABPN1Q86U42 306 aaKnown RBP eCLIP19.02■□□□□ 0.64
SNHG16-204ENST00000586942 CECR2Q9BXF3 1484 aa18.79■□□□□ 0.6
SNHG16-204ENST00000586942 AEBP2Q6ZN18 517 aaPredicted RBP18.79■□□□□ 0.6
SNHG16-204ENST00000586942 BAZ1AQ9NRL2 1556 aaPredicted RBP18.76■□□□□ 0.59
SNHG16-204ENST00000586942 EIF4G1Q04637 1599 aaKnown RBP18.69■□□□□ 0.58
SNHG16-204ENST00000586942 SMARCA4P51532 1647 aa18.69■□□□□ 0.58
SNHG16-204ENST00000586942 MROH2BQ7Z745 1585 aa18.66■□□□□ 0.58
SNHG16-204ENST00000586942 RSF1Q96T23 1441 aaPredicted RBP18.65■□□□□ 0.58
SNHG16-204ENST00000586942 PEG3Q9GZU2 1588 aa18.64■□□□□ 0.57
SNHG16-204ENST00000586942 ATAD2BQ9ULI0 1458 aa18.51■□□□□ 0.55
SNHG16-204ENST00000586942 SMARCA2P51531 1590 aa18.5■□□□□ 0.55
SNHG16-204ENST00000586942 NCAPD3P42695 1498 aa18.49■□□□□ 0.55
SNHG16-204ENST00000586942 CC2D2AQ9P2K1 1620 aa18.46■□□□□ 0.55
SNHG16-204ENST00000586942 WIZO95785 1651 aa18.43■□□□□ 0.54
SNHG16-204ENST00000586942 HMGXB3Q12766 1538 aa18.42■□□□□ 0.54
SNHG16-204ENST00000586942 TOP2AP11388 1531 aaKnown RBP18.33■□□□□ 0.53
SNHG16-204ENST00000586942 BAZ1BQ9UIG0 1483 aaKnown RBP18.3■□□□□ 0.52
SNHG16-204ENST00000586942 DNAJC5BQ9UF47 199 aa18.29■□□□□ 0.52
SNHG16-204ENST00000586942 SUPT5HO00267 1087 aaKnown RBP18.27■□□□□ 0.52
SNHG16-204ENST00000586942 CHIC1Q5VXU3 224 aa18.16■□□□□ 0.5
SNHG16-204ENST00000586942 CCDC88BA6NC98 1476 aa18.1■□□□□ 0.49
SNHG16-204ENST00000586942 CFTRP13569 1480 aa17.94■□□□□ 0.46
SNHG16-204ENST00000586942 CADPSQ9ULU8 1353 aa17.91■□□□□ 0.46
SNHG16-204ENST00000586942 LAMC3Q9Y6N6 1575 aa17.87■□□□□ 0.45
SNHG16-204ENST00000586942 PRDM2Q13029 1718 aa17.78■□□□□ 0.44
SNHG16-204ENST00000586942 NESP48681 1621 aa17.73■□□□□ 0.43
SNHG16-204ENST00000586942 PDS5BQ9NTI5 1447 aa17.71■□□□□ 0.43
SNHG16-204ENST00000586942 FANCD2Q9BXW9 1451 aa17.65■□□□□ 0.42
SNHG16-204ENST00000586942 CEP164Q9UPV0 1460 aa17.56■□□□□ 0.4
SNHG16-204ENST00000586942 KIF21AQ7Z4S6 1674 aa17.54■□□□□ 0.4
SNHG16-204ENST00000586942 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
SNHG16-204ENST00000586942 WRNQ14191 1432 aaPredicted RBP eCLIP17.52■□□□□ 0.46e-8■■□□□ 11.5
SNHG16-204ENST00000586942 TOP2BQ02880 1626 aa17.48■□□□□ 0.39
SNHG16-204ENST00000586942 BIVM-ERCC5R4GMW8 1640 aa17.48■□□□□ 0.39
SNHG16-204ENST00000586942 MRC2Q9UBG0 1479 aa17.48■□□□□ 0.39
SNHG16-204ENST00000586942 CUX1P39880 1505 aa17.47■□□□□ 0.39
SNHG16-204ENST00000586942 DNMBPQ6XZF7 1577 aa17.47■□□□□ 0.39
SNHG16-204ENST00000586942 URB2Q14146 1524 aaKnown RBP17.47■□□□□ 0.39
SNHG16-204ENST00000586942 WDR62O43379 1518 aa17.46■□□□□ 0.39
SNHG16-204ENST00000586942 THOC2Q8NI27 1593 aaKnown RBP17.45■□□□□ 0.38
SNHG16-204ENST00000586942 SYNJ1O43426 1573 aa17.45■□□□□ 0.38
SNHG16-204ENST00000586942 ERCC6Q03468 1493 aa17.44■□□□□ 0.38
SNHG16-204ENST00000586942 TOPBP1Q92547 1522 aa17.44■□□□□ 0.38
SNHG16-204ENST00000586942 POLA1P09884 1462 aaPredicted RBP17.32■□□□□ 0.36
SNHG16-204ENST00000586942 TRIM41Q8WV44 630 aa17.32■□□□□ 0.36
SNHG16-204ENST00000586942 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
SNHG16-204ENST00000586942 CUX2O14529 1486 aa17.3■□□□□ 0.36
SNHG16-204ENST00000586942 ABCA10Q8WWZ4 1543 aa17.26■□□□□ 0.35
SNHG16-204ENST00000586942 TARBP1Q13395 1621 aaKnown RBP17.25■□□□□ 0.35
SNHG16-204ENST00000586942 IFT140Q96RY7 1462 aa17.24■□□□□ 0.35
SNHG16-204ENST00000586942 SOGA1O94964 1423 aa17.23■□□□□ 0.35
SNHG16-204ENST00000586942 WDR97A6NE52 1622 aa17.22■□□□□ 0.35
SNHG16-204ENST00000586942 EEA1Q15075 1411 aa17.18■□□□□ 0.34
SNHG16-204ENST00000586942 RAD54L2Q9Y4B4 1467 aa17.18■□□□□ 0.34
SNHG16-204ENST00000586942 ABCA5Q8WWZ7 1642 aa17.13■□□□□ 0.33
SNHG16-204ENST00000586942 KIF27Q86VH2 1401 aa17.12■□□□□ 0.33
SNHG16-204ENST00000586942 RUSC2Q8N2Y8 1516 aa17.06■□□□□ 0.32
SNHG16-204ENST00000586942 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
SNHG16-204ENST00000586942 ZNF608Q9ULD9 1512 aaPredicted RBP17.06■□□□□ 0.32
SNHG16-204ENST00000586942 GAPVD1Q14C86 1478 aa17.05■□□□□ 0.32
SNHG16-204ENST00000586942 IGF1RP08069 1367 aa17.04■□□□□ 0.32
SNHG16-204ENST00000586942 TDRD9Q8NDG6 1382 aaKnown RBP17.03■□□□□ 0.32
SNHG16-204ENST00000586942 EIF4G3O43432 1585 aaKnown RBP17.02■□□□□ 0.31
SNHG16-204ENST00000586942 AQRO60306 1485 aaKnown RBP eCLIP17.01■□□□□ 0.315e-10■■■■□ 19.4
SNHG16-204ENST00000586942 GRIN2BQ13224 1484 aa17.01■□□□□ 0.31
SNHG16-204ENST00000586942 CSRNP3Q8WYN3 585 aa17■□□□□ 0.31
SNHG16-204ENST00000586942 PRXQ9BXM0 1461 aa16.99■□□□□ 0.31
SNHG16-204ENST00000586942 CUL7Q14999 1698 aa16.95■□□□□ 0.3
SNHG16-204ENST00000586942 PBRM1Q86U86 1689 aa16.94■□□□□ 0.3
SNHG16-204ENST00000586942 MAGI1Q96QZ7 1491 aaPredicted RBP16.94■□□□□ 0.3
SNHG16-204ENST00000586942 KIF21BO75037 1637 aa16.92■□□□□ 0.3
SNHG16-204ENST00000586942 FHAD1B1AJZ9 1412 aa16.9■□□□□ 0.3
SNHG16-204ENST00000586942 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.3
SNHG16-204ENST00000586942 ADAMTS12P58397 1594 aa16.89■□□□□ 0.29
SNHG16-204ENST00000586942 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
SNHG16-204ENST00000586942 RAPGEF2Q9Y4G8 1499 aa16.86■□□□□ 0.29
SNHG16-204ENST00000586942 SYNJ2O15056 1496 aa16.85■□□□□ 0.29
SNHG16-204ENST00000586942 FAM9AQ8IZU1 332 aaPredicted RBP16.82■□□□□ 0.28
SNHG16-204ENST00000586942 GOLGA3Q08378 1498 aa16.81■□□□□ 0.28
SNHG16-204ENST00000586942 GRIN2AQ12879 1464 aa16.79■□□□□ 0.28
SNHG16-204ENST00000586942 NUP160Q12769 1436 aa16.75■□□□□ 0.27
SNHG16-204ENST00000586942 TNIKQ9UKE5 1360 aa16.74■□□□□ 0.27
SNHG16-204ENST00000586942 CHMP7Q8WUX9 453 aaPredicted RBP16.7■□□□□ 0.26
SNHG16-204ENST00000586942 KIAA0586Q9BVV6 1533 aa16.68■□□□□ 0.26
SNHG16-204ENST00000586942 CHD1O14646 1710 aa16.67■□□□□ 0.26
SNHG16-204ENST00000586942 CEP170Q5SW79 1584 aa16.67■□□□□ 0.26
SNHG16-204ENST00000586942 LOC105371045A0A1W2PR82 267 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms