Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 AL512408.1-201ENST00000569378 2000 ntBASIC20.1■□□□□ 0.81
PABPC1P11940 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.1■□□□□ 0.81
PABPC1P11940 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PABPC1P11940 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
PABPC1P11940 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.1■□□□□ 0.81
PABPC1P11940 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.1■□□□□ 0.81
PABPC1P11940 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PABPC1P11940 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PABPC1P11940 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PABPC1P11940 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PABPC1P11940 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PABPC1P11940 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.09■□□□□ 0.81
PABPC1P11940 TUBB8P6-201ENST00000436895 1288 ntBASIC20.09■□□□□ 0.81
PABPC1P11940 KSR1P1-201ENST00000446298 240 ntBASIC20.09■□□□□ 0.81
PABPC1P11940 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
PABPC1P11940 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PABPC1P11940 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PABPC1P11940 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PABPC1P11940 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.09■□□□□ 0.81
PABPC1P11940 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.09■□□□□ 0.81
PABPC1P11940 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.09■□□□□ 0.81
PABPC1P11940 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PABPC1P11940 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.09■□□□□ 0.81
PABPC1P11940 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PABPC1P11940 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.09■□□□□ 0.81
PABPC1P11940 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PABPC1P11940 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.09■□□□□ 0.81
PABPC1P11940 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PABPC1P11940 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PABPC1P11940 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PABPC1P11940 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.08■□□□□ 0.81
PABPC1P11940 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PABPC1P11940 GABARAPL3-202ENST00000624044 1851 ntBASIC20.08■□□□□ 0.81
PABPC1P11940 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PABPC1P11940 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.08■□□□□ 0.81
PABPC1P11940 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
PABPC1P11940 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.08■□□□□ 0.81
PABPC1P11940 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.08■□□□□ 0.81
PABPC1P11940 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.08■□□□□ 0.81
PABPC1P11940 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.08■□□□□ 0.81
PABPC1P11940 REXO1L12P-201ENST00000622156 912 ntBASIC20.08■□□□□ 0.81
PABPC1P11940 CR392000.1-201ENST00000624770 1228 ntBASIC20.08■□□□□ 0.81
PABPC1P11940 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
PABPC1P11940 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PABPC1P11940 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.08■□□□□ 0.8
PABPC1P11940 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.08■□□□□ 0.8
PABPC1P11940 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PABPC1P11940 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
PABPC1P11940 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.08■□□□□ 0.8
PABPC1P11940 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PABPC1P11940 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.07■□□□□ 0.8
PABPC1P11940 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.07■□□□□ 0.8
PABPC1P11940 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PABPC1P11940 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PABPC1P11940 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
PABPC1P11940 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PABPC1P11940 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PABPC1P11940 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.07■□□□□ 0.8
PABPC1P11940 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PABPC1P11940 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PABPC1P11940 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PABPC1P11940 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PABPC1P11940 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.07■□□□□ 0.8
PABPC1P11940 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PABPC1P11940 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.07■□□□□ 0.8
PABPC1P11940 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.07■□□□□ 0.8
PABPC1P11940 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PABPC1P11940 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PABPC1P11940 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PABPC1P11940 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.07■□□□□ 0.8
PABPC1P11940 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PABPC1P11940 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PABPC1P11940 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PABPC1P11940 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PABPC1P11940 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PABPC1P11940 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.06■□□□□ 0.8
PABPC1P11940 KRT16P1-201ENST00000399124 1418 ntBASIC20.06■□□□□ 0.8
PABPC1P11940 NUDT16P1-203ENST00000513809 620 ntBASIC20.06■□□□□ 0.8
PABPC1P11940 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.06■□□□□ 0.8
PABPC1P11940 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PABPC1P11940 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.06■□□□□ 0.8
PABPC1P11940 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PABPC1P11940 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PABPC1P11940 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
PABPC1P11940 AL162377.1-201ENST00000618844 1793 ntBASIC20.06■□□□□ 0.8
PABPC1P11940 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.05■□□□□ 0.8
PABPC1P11940 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PABPC1P11940 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PABPC1P11940 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PABPC1P11940 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PABPC1P11940 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PABPC1P11940 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PABPC1P11940 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PABPC1P11940 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.05■□□□□ 0.8
PABPC1P11940 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
PABPC1P11940 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.05■□□□□ 0.8
PABPC1P11940 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.05■□□□□ 0.8
PABPC1P11940 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.05■□□□□ 0.8
PABPC1P11940 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.05■□□□□ 0.8
PABPC1P11940 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms