RNA–Protein interactions for RNA: ENST00000496623.5

PHF11-218, Transcript of PHD finger protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PHF11, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-218ENST00000496623 NISCHQ9Y2I1 1504 aa48.03■■■■■ 5.28
PHF11-218ENST00000496623 CCDC180Q9P1Z9 1646 aa43.04■■■■■ 4.48
PHF11-218ENST00000496623 ABCC9O60706 1549 aa42.54■■■■■ 4.4
PHF11-218ENST00000496623 RB1CC1Q8TDY2 1594 aa40.74■■■■■ 4.11
PHF11-218ENST00000496623 NACADO15069 1562 aa40.56■■■■■ 4.08
PHF11-218ENST00000496623 DCAF8L2P0C7V8 631 aa40.21■■■■■ 4.03
PHF11-218ENST00000496623 MYO15BQ96JP2 1530 aa40.16■■■■■ 4.02
PHF11-218ENST00000496623 ZCCHC6Q5VYS8 1495 aaKnown RBP39.92■■■■□ 3.98
PHF11-218ENST00000496623 UNC13AQ9UPW8 1703 aa39.82■■■■□ 3.97
PHF11-218ENST00000496623 DCAF1Q9Y4B6 1507 aa39.76■■■■□ 3.96
PHF11-218ENST00000496623 PABPN1Q86U42 306 aaKnown RBP eCLIP39.59■■■■□ 3.93
PHF11-218ENST00000496623 BICRAQ9NZM4 1560 aa39.52■■■■□ 3.92
PHF11-218ENST00000496623 DNAJC5BQ9UF47 199 aa39.5■■■■□ 3.91
PHF11-218ENST00000496623 SCRIBQ14160 1630 aa39.14■■■■□ 3.86
PHF11-218ENST00000496623 SHROOM4Q9ULL8 1493 aa39.13■■■■□ 3.85
PHF11-218ENST00000496623 EIF4G1Q04637 1599 aaKnown RBP38.53■■■■□ 3.76
PHF11-218ENST00000496623 CC2D2AQ9P2K1 1620 aa38.5■■■■□ 3.75
PHF11-218ENST00000496623 CECR2Q9BXF3 1484 aa38.31■■■■□ 3.72
PHF11-218ENST00000496623 SMARCA4P51532 1647 aa37.42■■■■□ 3.58
PHF11-218ENST00000496623 NCAPD3P42695 1498 aa37.4■■■■□ 3.58
PHF11-218ENST00000496623 ATAD2BQ9ULI0 1458 aa37.33■■■■□ 3.57
PHF11-218ENST00000496623 SMARCA2P51531 1590 aa37.29■■■■□ 3.56
PHF11-218ENST00000496623 BAZ1AQ9NRL2 1556 aaPredicted RBP37.29■■■■□ 3.56
PHF11-218ENST00000496623 HMGXB3Q12766 1538 aa37.22■■■■□ 3.55
PHF11-218ENST00000496623 PEG3Q9GZU2 1588 aa37.09■■■■□ 3.53
PHF11-218ENST00000496623 BAZ1BQ9UIG0 1483 aaKnown RBP37■■■■□ 3.51
PHF11-218ENST00000496623 MROH2BQ7Z745 1585 aa36.99■■■■□ 3.51
PHF11-218ENST00000496623 ERCC6Q03468 1493 aa36.74■■■■□ 3.47
PHF11-218ENST00000496623 NESP48681 1621 aa36.65■■■■□ 3.46
PHF11-218ENST00000496623 CUX2O14529 1486 aa36.6■■■■□ 3.45
PHF11-218ENST00000496623 WIZO95785 1651 aa36.57■■■■□ 3.44
PHF11-218ENST00000496623 LAMC3Q9Y6N6 1575 aa36.55■■■■□ 3.44
PHF11-218ENST00000496623 RSF1Q96T23 1441 aaPredicted RBP36.35■■■■□ 3.41
PHF11-218ENST00000496623 THOC2Q8NI27 1593 aaKnown RBP36.3■■■■□ 3.4
PHF11-218ENST00000496623 PDS5BQ9NTI5 1447 aa36.27■■■■□ 3.4
PHF11-218ENST00000496623 CADPSQ9ULU8 1353 aa36.26■■■■□ 3.39
PHF11-218ENST00000496623 KIF21AQ7Z4S6 1674 aa36.26■■■■□ 3.39
PHF11-218ENST00000496623 TOP2AP11388 1531 aaKnown RBP36.18■■■■□ 3.38
PHF11-218ENST00000496623 DNAJC5Q9H3Z4 198 aa36.06■■■■□ 3.36
PHF11-218ENST00000496623 MRC2Q9UBG0 1479 aa35.96■■■■□ 3.35
PHF11-218ENST00000496623 CFTRP13569 1480 aa35.95■■■■□ 3.35
PHF11-218ENST00000496623 CEP164Q9UPV0 1460 aa35.89■■■■□ 3.34
PHF11-218ENST00000496623 WDR62O43379 1518 aa35.88■■■■□ 3.33
PHF11-218ENST00000496623 FANCD2Q9BXW9 1451 aa35.86■■■■□ 3.33
PHF11-218ENST00000496623 PRDM2Q13029 1718 aa35.71■■■■□ 3.31
PHF11-218ENST00000496623 CCDC88BA6NC98 1476 aa35.7■■■■□ 3.31
PHF11-218ENST00000496623 URB2Q14146 1524 aaKnown RBP35.54■■■■□ 3.28
PHF11-218ENST00000496623 TOPBP1Q92547 1522 aa35.22■■■■□ 3.23
PHF11-218ENST00000496623 ABCC8Q09428 1581 aa35.21■■■■□ 3.23
PHF11-218ENST00000496623 DNMBPQ6XZF7 1577 aa35.17■■■■□ 3.22
PHF11-218ENST00000496623 IFT140Q96RY7 1462 aa35.16■■■■□ 3.22
PHF11-218ENST00000496623 ZNF608Q9ULD9 1512 aaPredicted RBP35.01■■■■□ 3.19
PHF11-218ENST00000496623 TARBP1Q13395 1621 aaKnown RBP34.92■■■■□ 3.18
PHF11-218ENST00000496623 EIF4G3O43432 1585 aaKnown RBP34.91■■■■□ 3.18
PHF11-218ENST00000496623 POLA1P09884 1462 aaPredicted RBP34.9■■■■□ 3.18
PHF11-218ENST00000496623 SUPT5HO00267 1087 aaKnown RBP34.89■■■■□ 3.18
PHF11-218ENST00000496623 OSCARQ8IYS5 282 aa34.88■■■■□ 3.17
PHF11-218ENST00000496623 CUX1P39880 1505 aa34.75■■■■□ 3.15
PHF11-218ENST00000496623 AQRO60306 1485 aaKnown RBP eCLIP34.72■■■■□ 3.15
PHF11-218ENST00000496623 FGD5Q6ZNL6 1462 aa34.72■■■■□ 3.15
PHF11-218ENST00000496623 RAD54L2Q9Y4B4 1467 aa34.71■■■■□ 3.15
PHF11-218ENST00000496623 SOGA1O94964 1423 aa34.7■■■■□ 3.15
PHF11-218ENST00000496623 WDR97A6NE52 1622 aa34.66■■■■□ 3.14
PHF11-218ENST00000496623 TRIM41Q8WV44 630 aa34.58■■■■□ 3.13
PHF11-218ENST00000496623 CHD1O14646 1710 aa34.58■■■■□ 3.13
PHF11-218ENST00000496623 TDRD9Q8NDG6 1382 aaKnown RBP34.55■■■■□ 3.12
PHF11-218ENST00000496623 RIMBP3CA6NJZ7 1639 aa34.47■■■■□ 3.11
PHF11-218ENST00000496623 RIMBP3BA6NNM3 1639 aa34.47■■■■□ 3.11
PHF11-218ENST00000496623 RIMBP3Q9UFD9 1639 aa34.47■■■■□ 3.11
PHF11-218ENST00000496623 SNAPC4Q5SXM2 1469 aa34.43■■■■□ 3.1
PHF11-218ENST00000496623 GRIN2BQ13224 1484 aa34.4■■■■□ 3.1
PHF11-218ENST00000496623 ARHGEF11O15085 1522 aa34.4■■■■□ 3.1
PHF11-218ENST00000496623 MAGI1Q96QZ7 1491 aaPredicted RBP34.39■■■■□ 3.1
PHF11-218ENST00000496623 ABCA10Q8WWZ4 1543 aa34.37■■■■□ 3.09
PHF11-218ENST00000496623 FBLN2P98095 1184 aa34.37■■■■□ 3.09
PHF11-218ENST00000496623 BIVM-ERCC5R4GMW8 1640 aa34.34■■■■□ 3.09
PHF11-218ENST00000496623 PBRM1Q86U86 1689 aa34.33■■■■□ 3.09
PHF11-218ENST00000496623 TOP2BQ02880 1626 aa34.33■■■■□ 3.09
PHF11-218ENST00000496623 GAPVD1Q14C86 1478 aa34.32■■■■□ 3.08
PHF11-218ENST00000496623 ABCA5Q8WWZ7 1642 aa34.31■■■■□ 3.08
PHF11-218ENST00000496623 WRNQ14191 1432 aaPredicted RBP eCLIP34.3■■■■□ 3.08
PHF11-218ENST00000496623 SYNJ1O43426 1573 aa34.26■■■■□ 3.07
PHF11-218ENST00000496623 SYNJ2O15056 1496 aa34.26■■■■□ 3.07
PHF11-218ENST00000496623 CHMP7Q8WUX9 453 aaPredicted RBP34.21■■■■□ 3.07
PHF11-218ENST00000496623 CLASP1Q7Z460 1538 aa34.2■■■■□ 3.06
PHF11-218ENST00000496623 ARAP1Q96P48 1450 aa34.07■■■■□ 3.05
PHF11-218ENST00000496623 ADAMTS12P58397 1594 aa34.02■■■■□ 3.04
PHF11-218ENST00000496623 CYB5RLQ6IPT4 315 aa34.01■■■■□ 3.03
PHF11-218ENST00000496623 GRIN2AQ12879 1464 aa33.97■■■■□ 3.03
PHF11-218ENST00000496623 ERICH3Q5RHP9 1530 aa33.96■■■■□ 3.03
PHF11-218ENST00000496623 FHAD1B1AJZ9 1412 aa33.9■■■■□ 3.02
PHF11-218ENST00000496623 NUP160Q12769 1436 aa33.84■■■■□ 3.01
PHF11-218ENST00000496623 CEP170Q5SW79 1584 aa33.83■■■■□ 3.01
PHF11-218ENST00000496623 SHROOM2Q13796 1616 aa33.68■■■□□ 2.98
PHF11-218ENST00000496623 KIF27Q86VH2 1401 aa33.63■■■□□ 2.97
PHF11-218ENST00000496623 ERCC6L2Q5T890 1561 aa33.63■■■□□ 2.97
PHF11-218ENST00000496623 CUL7Q14999 1698 aa33.56■■■□□ 2.96
PHF11-218ENST00000496623 RUSC2Q8N2Y8 1516 aa33.54■■■□□ 2.96
PHF11-218ENST00000496623 IGF1RP08069 1367 aa33.52■■■□□ 2.96
PHF11-218ENST00000496623 TRHP20396 242 aaPredicted RBP33.51■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms