Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.14■□□□□ 0.81
PABPC1P11940 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PABPC1P11940 AC026471.5-201ENST00000615068 467 ntBASIC20.14■□□□□ 0.81
PABPC1P11940 AC073912.3-201ENST00000624414 853 ntBASIC20.14■□□□□ 0.81
PABPC1P11940 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PABPC1P11940 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PABPC1P11940 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PABPC1P11940 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.14■□□□□ 0.81
PABPC1P11940 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PABPC1P11940 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.13■□□□□ 0.81
PABPC1P11940 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PABPC1P11940 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.13■□□□□ 0.81
PABPC1P11940 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.13■□□□□ 0.81
PABPC1P11940 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PABPC1P11940 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.13■□□□□ 0.81
PABPC1P11940 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.13■□□□□ 0.81
PABPC1P11940 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.13■□□□□ 0.81
PABPC1P11940 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PABPC1P11940 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.13■□□□□ 0.81
PABPC1P11940 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
PABPC1P11940 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.13■□□□□ 0.81
PABPC1P11940 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.13■□□□□ 0.81
PABPC1P11940 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PABPC1P11940 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PABPC1P11940 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PABPC1P11940 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PABPC1P11940 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PABPC1P11940 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PABPC1P11940 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.12■□□□□ 0.81
PABPC1P11940 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.12■□□□□ 0.81
PABPC1P11940 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PABPC1P11940 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PABPC1P11940 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.12■□□□□ 0.81
PABPC1P11940 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PABPC1P11940 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PABPC1P11940 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PABPC1P11940 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PABPC1P11940 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PABPC1P11940 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PABPC1P11940 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PABPC1P11940 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.12■□□□□ 0.81
PABPC1P11940 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PABPC1P11940 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PABPC1P11940 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.12■□□□□ 0.81
PABPC1P11940 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PABPC1P11940 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PABPC1P11940 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PABPC1P11940 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PABPC1P11940 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
PABPC1P11940 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PABPC1P11940 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PABPC1P11940 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PABPC1P11940 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.11■□□□□ 0.81
PABPC1P11940 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.11■□□□□ 0.81
PABPC1P11940 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PABPC1P11940 AL355355.2-201ENST00000442321 338 ntBASIC20.11■□□□□ 0.81
PABPC1P11940 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PABPC1P11940 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.11■□□□□ 0.81
PABPC1P11940 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.11■□□□□ 0.81
PABPC1P11940 BX088651.1-201ENST00000540551 451 ntBASIC20.11■□□□□ 0.81
PABPC1P11940 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.11■□□□□ 0.81
PABPC1P11940 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.11■□□□□ 0.81
PABPC1P11940 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.11■□□□□ 0.81
PABPC1P11940 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.11■□□□□ 0.81
PABPC1P11940 C1QL1P1-201ENST00000568105 661 ntBASIC20.11■□□□□ 0.81
PABPC1P11940 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PABPC1P11940 FEM1AP1-201ENST00000431297 1995 ntBASIC20.11■□□□□ 0.81
PABPC1P11940 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PABPC1P11940 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PABPC1P11940 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PABPC1P11940 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PABPC1P11940 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.1■□□□□ 0.81
PABPC1P11940 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PABPC1P11940 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.1■□□□□ 0.81
PABPC1P11940 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PABPC1P11940 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PABPC1P11940 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PABPC1P11940 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.1■□□□□ 0.81
PABPC1P11940 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.1■□□□□ 0.81
PABPC1P11940 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PABPC1P11940 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PABPC1P11940 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PABPC1P11940 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.1■□□□□ 0.81
PABPC1P11940 NIFKP9-201ENST00000419265 221 ntBASIC20.1■□□□□ 0.81
PABPC1P11940 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.1■□□□□ 0.81
PABPC1P11940 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.1■□□□□ 0.81
PABPC1P11940 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.1■□□□□ 0.81
PABPC1P11940 TSPY15P-201ENST00000457163 923 ntBASIC20.1■□□□□ 0.81
PABPC1P11940 KRT18P16-201ENST00000510337 1294 ntBASIC20.1■□□□□ 0.81
PABPC1P11940 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.1■□□□□ 0.81
PABPC1P11940 AL355075.4-201ENST00000554988 638 ntBASIC20.1■□□□□ 0.81
PABPC1P11940 AP003071.4-201ENST00000562276 1284 ntBASIC20.1■□□□□ 0.81
PABPC1P11940 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.1■□□□□ 0.81
PABPC1P11940 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PABPC1P11940 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PABPC1P11940 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PABPC1P11940 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PABPC1P11940 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PABPC1P11940 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.1■□□□□ 0.81
PABPC1P11940 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms