Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
SFTPBP07988 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SFTPBP07988 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SFTPBP07988 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.06■□□□□ 0.32
SFTPBP07988 AC093787.1-201ENST00000450396 207 ntBASIC17.06■□□□□ 0.32
SFTPBP07988 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.06■□□□□ 0.32
SFTPBP07988 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SFTPBP07988 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.06■□□□□ 0.32
SFTPBP07988 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.06■□□□□ 0.32
SFTPBP07988 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.06■□□□□ 0.32
SFTPBP07988 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.06■□□□□ 0.32
SFTPBP07988 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.06■□□□□ 0.32
SFTPBP07988 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.06■□□□□ 0.32
SFTPBP07988 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SFTPBP07988 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SFTPBP07988 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.06■□□□□ 0.32
SFTPBP07988 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SFTPBP07988 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SFTPBP07988 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SFTPBP07988 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SFTPBP07988 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SFTPBP07988 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SFTPBP07988 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SFTPBP07988 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SFTPBP07988 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SFTPBP07988 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SFTPBP07988 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SFTPBP07988 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SFTPBP07988 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SFTPBP07988 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SFTPBP07988 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SFTPBP07988 RARRES2P4-201ENST00000514074 484 ntBASIC17.05■□□□□ 0.32
SFTPBP07988 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.05■□□□□ 0.32
SFTPBP07988 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.05■□□□□ 0.32
SFTPBP07988 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.05■□□□□ 0.32
SFTPBP07988 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
SFTPBP07988 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SFTPBP07988 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SFTPBP07988 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
SFTPBP07988 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SFTPBP07988 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SFTPBP07988 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SFTPBP07988 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFTPBP07988 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFTPBP07988 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFTPBP07988 AC018445.3-201ENST00000624177 1945 ntBASIC17.04■□□□□ 0.32
SFTPBP07988 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFTPBP07988 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFTPBP07988 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SFTPBP07988 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFTPBP07988 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.04■□□□□ 0.32
SFTPBP07988 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SFTPBP07988 AC142086.2-201ENST00000569753 217 ntBASIC17.04■□□□□ 0.32
SFTPBP07988 OR10C1-204ENST00000622521 1039 ntBASIC17.04■□□□□ 0.32
SFTPBP07988 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SFTPBP07988 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SFTPBP07988 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFTPBP07988 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SFTPBP07988 AL158211.5-201ENST00000623583 2518 ntBASIC17.04■□□□□ 0.32
SFTPBP07988 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFTPBP07988 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFTPBP07988 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SFTPBP07988 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SFTPBP07988 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SFTPBP07988 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SFTPBP07988 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SFTPBP07988 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SFTPBP07988 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.03■□□□□ 0.32
SFTPBP07988 MKRN4P-201ENST00000444706 1521 ntBASIC17.03■□□□□ 0.32
SFTPBP07988 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SFTPBP07988 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SFTPBP07988 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.03■□□□□ 0.32
SFTPBP07988 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SFTPBP07988 MCRIP2P1-201ENST00000394346 511 ntBASIC17.03■□□□□ 0.32
SFTPBP07988 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SFTPBP07988 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.03■□□□□ 0.32
SFTPBP07988 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
SFTPBP07988 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.03■□□□□ 0.32
SFTPBP07988 AC098934.4-201ENST00000564127 592 ntBASIC17.03■□□□□ 0.32
SFTPBP07988 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.03■□□□□ 0.32
SFTPBP07988 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SFTPBP07988 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
SFTPBP07988 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SFTPBP07988 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.03■□□□□ 0.32
SFTPBP07988 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.03■□□□□ 0.32
SFTPBP07988 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.02■□□□□ 0.32
SFTPBP07988 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SFTPBP07988 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SFTPBP07988 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SFTPBP07988 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SFTPBP07988 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SFTPBP07988 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.02■□□□□ 0.32
SFTPBP07988 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.02■□□□□ 0.32
SFTPBP07988 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SFTPBP07988 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.02■□□□□ 0.32
SFTPBP07988 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SFTPBP07988 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SFTPBP07988 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SFTPBP07988 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.02■□□□□ 0.32
SFTPBP07988 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms