Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDB2O43679 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDB2O43679 POM121L13P-201ENST00000422362 380 ntBASIC19.69■□□□□ 0.74
LDB2O43679 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.69■□□□□ 0.74
LDB2O43679 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
LDB2O43679 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.69■□□□□ 0.74
LDB2O43679 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDB2O43679 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.69■□□□□ 0.74
LDB2O43679 AL121829.2-201ENST00000620908 328 ntBASIC19.69■□□□□ 0.74
LDB2O43679 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
LDB2O43679 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
LDB2O43679 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LDB2O43679 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
LDB2O43679 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LDB2O43679 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.69■□□□□ 0.74
LDB2O43679 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDB2O43679 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDB2O43679 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LDB2O43679 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.69■□□□□ 0.74
LDB2O43679 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDB2O43679 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDB2O43679 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDB2O43679 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDB2O43679 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.68■□□□□ 0.74
LDB2O43679 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDB2O43679 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDB2O43679 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LDB2O43679 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
LDB2O43679 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
LDB2O43679 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LDB2O43679 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.68■□□□□ 0.74
LDB2O43679 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDB2O43679 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.68■□□□□ 0.74
LDB2O43679 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDB2O43679 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LDB2O43679 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LDB2O43679 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDB2O43679 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDB2O43679 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDB2O43679 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.67■□□□□ 0.74
LDB2O43679 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LDB2O43679 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDB2O43679 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.67■□□□□ 0.74
LDB2O43679 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LDB2O43679 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LDB2O43679 ABHD17AP1-201ENST00000358206 933 ntBASIC19.67■□□□□ 0.74
LDB2O43679 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDB2O43679 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.67■□□□□ 0.74
LDB2O43679 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.67■□□□□ 0.74
LDB2O43679 AP003097.1-201ENST00000530657 1135 ntBASIC19.67■□□□□ 0.74
LDB2O43679 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.67■□□□□ 0.74
LDB2O43679 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.67■□□□□ 0.74
LDB2O43679 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LDB2O43679 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.67■□□□□ 0.74
LDB2O43679 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.67■□□□□ 0.74
LDB2O43679 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDB2O43679 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDB2O43679 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.67■□□□□ 0.74
LDB2O43679 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDB2O43679 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LDB2O43679 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LDB2O43679 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDB2O43679 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LDB2O43679 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LDB2O43679 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LDB2O43679 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
LDB2O43679 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.66■□□□□ 0.74
LDB2O43679 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDB2O43679 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.66■□□□□ 0.74
LDB2O43679 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.66■□□□□ 0.74
LDB2O43679 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LDB2O43679 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LDB2O43679 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDB2O43679 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
LDB2O43679 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDB2O43679 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
LDB2O43679 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
LDB2O43679 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDB2O43679 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LDB2O43679 AC116562.4-201ENST00000641316 2276 ntBASIC19.65■□□□□ 0.74
LDB2O43679 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.65■□□□□ 0.74
LDB2O43679 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDB2O43679 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.65■□□□□ 0.74
LDB2O43679 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDB2O43679 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDB2O43679 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LDB2O43679 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LDB2O43679 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
LDB2O43679 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
LDB2O43679 AC026366.1-201ENST00000488803 879 ntBASIC19.65■□□□□ 0.74
LDB2O43679 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.65■□□□□ 0.74
LDB2O43679 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LDB2O43679 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.65■□□□□ 0.74
LDB2O43679 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.65■□□□□ 0.74
LDB2O43679 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.65■□□□□ 0.74
LDB2O43679 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDB2O43679 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDB2O43679 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LDB2O43679 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.65■□□□□ 0.74
LDB2O43679 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms