Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AC026366.1-201ENST00000488803 879 ntBASIC17.26■□□□□ 0.35
CDH20Q9HBT6 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 FAM201B-201ENST00000458407 597 ntBASIC17.25■□□□□ 0.35
CDH20Q9HBT6 RPS2P52-201ENST00000469610 820 ntBASIC17.25■□□□□ 0.35
CDH20Q9HBT6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 AC120498.8-201ENST00000614275 531 ntBASIC17.25■□□□□ 0.35
CDH20Q9HBT6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH20Q9HBT6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH20Q9HBT6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDH20Q9HBT6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH20Q9HBT6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH20Q9HBT6 KRT17P3-201ENST00000420566 1262 ntBASIC17.24■□□□□ 0.35
CDH20Q9HBT6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH20Q9HBT6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.24■□□□□ 0.35
CDH20Q9HBT6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.24■□□□□ 0.35
CDH20Q9HBT6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDH20Q9HBT6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH20Q9HBT6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH20Q9HBT6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDH20Q9HBT6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH20Q9HBT6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH20Q9HBT6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH20Q9HBT6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH20Q9HBT6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 MIR4651-201ENST00000582622 73 ntBASIC17.23■□□□□ 0.35
CDH20Q9HBT6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 AL391422.3-201ENST00000603791 2761 ntBASIC17.23■□□□□ 0.35
CDH20Q9HBT6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 AC099778.1-201ENST00000568593 1911 ntBASIC17.23■□□□□ 0.35
CDH20Q9HBT6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CDH20Q9HBT6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH20Q9HBT6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH20Q9HBT6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH20Q9HBT6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH20Q9HBT6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms