Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 TMEM179-206ENST00000616017 1645 ntBASIC17.06■□□□□ 0.32
BEST4Q8NFU0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST4Q8NFU0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 AC012414.1-201ENST00000556676 535 ntBASIC17.04■□□□□ 0.32
BEST4Q8NFU0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.04■□□□□ 0.32
BEST4Q8NFU0 AC120498.10-201ENST00000621827 505 ntBASIC17.04■□□□□ 0.32
BEST4Q8NFU0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 AC104581.1-202ENST00000635932 2618 ntBASIC17.04■□□□□ 0.32
BEST4Q8NFU0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BEST4Q8NFU0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BEST4Q8NFU0 AL138781.2-201ENST00000617896 1843 ntBASIC17.03■□□□□ 0.32
BEST4Q8NFU0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST4Q8NFU0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
BEST4Q8NFU0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BEST4Q8NFU0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
BEST4Q8NFU0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.03■□□□□ 0.32
BEST4Q8NFU0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST4Q8NFU0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST4Q8NFU0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST4Q8NFU0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
BEST4Q8NFU0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
BEST4Q8NFU0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
BEST4Q8NFU0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.03■□□□□ 0.32
BEST4Q8NFU0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.03■□□□□ 0.32
BEST4Q8NFU0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.03■□□□□ 0.32
BEST4Q8NFU0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST4Q8NFU0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST4Q8NFU0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.03■□□□□ 0.32
BEST4Q8NFU0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST4Q8NFU0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
BEST4Q8NFU0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
BEST4Q8NFU0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST4Q8NFU0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST4Q8NFU0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST4Q8NFU0 KRT87P-202ENST00000534226 1464 ntBASIC17.02■□□□□ 0.32
BEST4Q8NFU0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST4Q8NFU0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.02■□□□□ 0.32
BEST4Q8NFU0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms