Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 KRT8P17-201ENST00000453110 1448 ntBASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM56-RWDD3S4R434 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.21■□□□□ 0.18
TMEM56-RWDD3S4R434 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM56-RWDD3S4R434 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM56-RWDD3S4R434 AC019069.1-201ENST00000610008 1333 ntBASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 KRT16P6-202ENST00000425692 1426 ntBASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 AC138932.1-201ENST00000534164 6830 ntBASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 AC027612.3-201ENST00000413684 1047 ntBASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 LINC02228-203ENST00000641970 1355 ntBASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM56-RWDD3S4R434 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 SUDS3P1-201ENST00000505831 966 ntBASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 NEFHP1-201ENST00000412845 2629 ntBASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM56-RWDD3S4R434 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms