Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
PCDHAC2Q9Y5I4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC23.76■■□□□ 1.39
PCDHAC2Q9Y5I4 AC011506.1-201ENST00000474329 610 ntBASIC23.76■■□□□ 1.39
PCDHAC2Q9Y5I4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHAC2Q9Y5I4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHAC2Q9Y5I4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHAC2Q9Y5I4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
PCDHAC2Q9Y5I4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
PCDHAC2Q9Y5I4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHAC2Q9Y5I4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.76■■□□□ 1.39
PCDHAC2Q9Y5I4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHAC2Q9Y5I4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHAC2Q9Y5I4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
PCDHAC2Q9Y5I4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHAC2Q9Y5I4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.75■■□□□ 1.39
PCDHAC2Q9Y5I4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDHAC2Q9Y5I4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PCDHAC2Q9Y5I4 INGX-201ENST00000359239 846 ntBASIC23.75■■□□□ 1.39
PCDHAC2Q9Y5I4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC23.75■■□□□ 1.39
PCDHAC2Q9Y5I4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC23.75■■□□□ 1.39
PCDHAC2Q9Y5I4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.75■■□□□ 1.39
PCDHAC2Q9Y5I4 AL590326.2-201ENST00000625139 305 ntBASIC23.75■■□□□ 1.39
PCDHAC2Q9Y5I4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHAC2Q9Y5I4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHAC2Q9Y5I4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHAC2Q9Y5I4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDHAC2Q9Y5I4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.75■■□□□ 1.39
PCDHAC2Q9Y5I4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.75■■□□□ 1.39
PCDHAC2Q9Y5I4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHAC2Q9Y5I4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHAC2Q9Y5I4 AC012676.1-201ENST00000574705 1949 ntBASIC23.74■■□□□ 1.39
PCDHAC2Q9Y5I4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHAC2Q9Y5I4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PCDHAC2Q9Y5I4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHAC2Q9Y5I4 AP006587.1-201ENST00000534129 1502 ntBASIC23.74■■□□□ 1.39
PCDHAC2Q9Y5I4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHAC2Q9Y5I4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHAC2Q9Y5I4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHAC2Q9Y5I4 AL137013.1-201ENST00000432946 1228 ntBASIC23.74■■□□□ 1.39
PCDHAC2Q9Y5I4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC23.74■■□□□ 1.39
PCDHAC2Q9Y5I4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.74■■□□□ 1.39
PCDHAC2Q9Y5I4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHAC2Q9Y5I4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
PCDHAC2Q9Y5I4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHAC2Q9Y5I4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHAC2Q9Y5I4 KRT18P22-201ENST00000402024 1347 ntBASIC23.74■■□□□ 1.39
PCDHAC2Q9Y5I4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHAC2Q9Y5I4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHAC2Q9Y5I4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
PCDHAC2Q9Y5I4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHAC2Q9Y5I4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHAC2Q9Y5I4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.73■■□□□ 1.39
PCDHAC2Q9Y5I4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHAC2Q9Y5I4 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.73■■□□□ 1.39
PCDHAC2Q9Y5I4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHAC2Q9Y5I4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHAC2Q9Y5I4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHAC2Q9Y5I4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHAC2Q9Y5I4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHAC2Q9Y5I4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHAC2Q9Y5I4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHAC2Q9Y5I4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHAC2Q9Y5I4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHAC2Q9Y5I4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHAC2Q9Y5I4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHAC2Q9Y5I4 AC026310.3-201ENST00000625186 2373 ntBASIC23.72■■□□□ 1.39
PCDHAC2Q9Y5I4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHAC2Q9Y5I4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.72■■□□□ 1.39
PCDHAC2Q9Y5I4 B3GAT3P1-201ENST00000471720 806 ntBASIC23.72■■□□□ 1.39
PCDHAC2Q9Y5I4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHAC2Q9Y5I4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.72■■□□□ 1.39
PCDHAC2Q9Y5I4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDHAC2Q9Y5I4 TFP1-202ENST00000475455 1573 ntBASIC23.72■■□□□ 1.39
PCDHAC2Q9Y5I4 AC116351.2-201ENST00000606540 1585 ntBASIC23.72■■□□□ 1.39
PCDHAC2Q9Y5I4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHAC2Q9Y5I4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHAC2Q9Y5I4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC23.72■■□□□ 1.39
PCDHAC2Q9Y5I4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
PCDHAC2Q9Y5I4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHAC2Q9Y5I4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHAC2Q9Y5I4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
PCDHAC2Q9Y5I4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
PCDHAC2Q9Y5I4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHAC2Q9Y5I4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHAC2Q9Y5I4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
PCDHAC2Q9Y5I4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHAC2Q9Y5I4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
PCDHAC2Q9Y5I4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHAC2Q9Y5I4 NME3-204ENST00000563498 920 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDHAC2Q9Y5I4 NTF6B-201ENST00000591913 560 ntBASIC23.71■■□□□ 1.39
PCDHAC2Q9Y5I4 AL031985.4-201ENST00000642138 673 ntBASIC23.71■■□□□ 1.39
PCDHAC2Q9Y5I4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
PCDHAC2Q9Y5I4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.71■■□□□ 1.39
PCDHAC2Q9Y5I4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHAC2Q9Y5I4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHAC2Q9Y5I4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
PCDHAC2Q9Y5I4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.7■■□□□ 1.39
PCDHAC2Q9Y5I4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.7■■□□□ 1.39
PCDHAC2Q9Y5I4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHAC2Q9Y5I4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms