Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT78Q8N1N4 AL390719.1-204ENST00000412397 1219 ntBASIC19.2■□□□□ 0.66
KRT78Q8N1N4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
KRT78Q8N1N4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.2■□□□□ 0.66
KRT78Q8N1N4 AL138781.1-201ENST00000566567 1274 ntBASIC19.2■□□□□ 0.66
KRT78Q8N1N4 AC104771.1-201ENST00000603335 964 ntBASIC19.2■□□□□ 0.66
KRT78Q8N1N4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT78Q8N1N4 AC133041.1-202ENST00000642053 222 ntBASIC19.2■□□□□ 0.66
KRT78Q8N1N4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT78Q8N1N4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
KRT78Q8N1N4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT78Q8N1N4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.2■□□□□ 0.66
KRT78Q8N1N4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.2■□□□□ 0.66
KRT78Q8N1N4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.2■□□□□ 0.66
KRT78Q8N1N4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT78Q8N1N4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 AC073210.2-201ENST00000430369 194 ntBASIC19.19■□□□□ 0.66
KRT78Q8N1N4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT78Q8N1N4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT78Q8N1N4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT78Q8N1N4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT78Q8N1N4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT78Q8N1N4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT78Q8N1N4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT78Q8N1N4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT78Q8N1N4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.18■□□□□ 0.66
KRT78Q8N1N4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT78Q8N1N4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT78Q8N1N4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.18■□□□□ 0.66
KRT78Q8N1N4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT78Q8N1N4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.18■□□□□ 0.66
KRT78Q8N1N4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.18■□□□□ 0.66
KRT78Q8N1N4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.18■□□□□ 0.66
KRT78Q8N1N4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
KRT78Q8N1N4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
KRT78Q8N1N4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT78Q8N1N4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
KRT78Q8N1N4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT78Q8N1N4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT78Q8N1N4 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.18■□□□□ 0.66
KRT78Q8N1N4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT78Q8N1N4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT78Q8N1N4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT78Q8N1N4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT78Q8N1N4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT78Q8N1N4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
KRT78Q8N1N4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.17■□□□□ 0.66
KRT78Q8N1N4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.17■□□□□ 0.66
KRT78Q8N1N4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT78Q8N1N4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT78Q8N1N4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT78Q8N1N4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT78Q8N1N4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT78Q8N1N4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT78Q8N1N4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT78Q8N1N4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT78Q8N1N4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT78Q8N1N4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT78Q8N1N4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KRT78Q8N1N4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT78Q8N1N4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
KRT78Q8N1N4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.16■□□□□ 0.66
KRT78Q8N1N4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KRT78Q8N1N4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.16■□□□□ 0.66
KRT78Q8N1N4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.16■□□□□ 0.66
KRT78Q8N1N4 AC069152.1-201ENST00000438030 544 ntBASIC19.16■□□□□ 0.66
KRT78Q8N1N4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.16■□□□□ 0.66
KRT78Q8N1N4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.16■□□□□ 0.66
KRT78Q8N1N4 AC142086.2-201ENST00000569753 217 ntBASIC19.16■□□□□ 0.66
KRT78Q8N1N4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT78Q8N1N4 MYC-209ENST00000641252 345 ntBASIC19.16■□□□□ 0.66
KRT78Q8N1N4 AL691432.2-201ENST00000607222 2038 ntBASIC19.16■□□□□ 0.66
KRT78Q8N1N4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
KRT78Q8N1N4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KRT78Q8N1N4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT78Q8N1N4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
KRT78Q8N1N4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms