Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SFTPBP07988 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SFTPBP07988 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SFTPBP07988 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SFTPBP07988 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SFTPBP07988 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPBP07988 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPBP07988 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPBP07988 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPBP07988 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
SFTPBP07988 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SFTPBP07988 CNN2P6-201ENST00000439038 900 ntBASIC17.23■□□□□ 0.35
SFTPBP07988 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SFTPBP07988 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.23■□□□□ 0.35
SFTPBP07988 CDV3P1-201ENST00000471403 739 ntBASIC17.23■□□□□ 0.35
SFTPBP07988 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPBP07988 AC005181.1-201ENST00000604782 1256 ntBASIC17.23■□□□□ 0.35
SFTPBP07988 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.23■□□□□ 0.35
SFTPBP07988 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SFTPBP07988 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPBP07988 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SFTPBP07988 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPBP07988 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPBP07988 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPBP07988 TCF3P1-201ENST00000423021 1937 ntBASIC17.23■□□□□ 0.35
SFTPBP07988 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
SFTPBP07988 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SFTPBP07988 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPBP07988 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPBP07988 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPBP07988 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPBP07988 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SFTPBP07988 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPBP07988 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPBP07988 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SFTPBP07988 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPBP07988 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPBP07988 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.22■□□□□ 0.35
SFTPBP07988 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPBP07988 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.22■□□□□ 0.35
SFTPBP07988 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPBP07988 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPBP07988 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPBP07988 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
SFTPBP07988 AL050303.2-201ENST00000619798 666 ntBASIC17.22■□□□□ 0.35
SFTPBP07988 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SFTPBP07988 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.22■□□□□ 0.35
SFTPBP07988 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SFTPBP07988 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPBP07988 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SFTPBP07988 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPBP07988 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPBP07988 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPBP07988 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPBP07988 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.22■□□□□ 0.35
SFTPBP07988 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPBP07988 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPBP07988 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SFTPBP07988 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPBP07988 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
SFTPBP07988 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.21■□□□□ 0.35
SFTPBP07988 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.21■□□□□ 0.35
SFTPBP07988 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPBP07988 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPBP07988 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPBP07988 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPBP07988 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPBP07988 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPBP07988 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
SFTPBP07988 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPBP07988 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPBP07988 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPBP07988 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPBP07988 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPBP07988 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.21■□□□□ 0.35
SFTPBP07988 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.21■□□□□ 0.35
SFTPBP07988 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.21■□□□□ 0.35
SFTPBP07988 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.21■□□□□ 0.35
SFTPBP07988 FAM21FP-204ENST00000608637 956 ntBASIC17.21■□□□□ 0.35
SFTPBP07988 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.21■□□□□ 0.35
SFTPBP07988 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPBP07988 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPBP07988 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.21■□□□□ 0.35
SFTPBP07988 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPBP07988 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPBP07988 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.21■□□□□ 0.34
SFTPBP07988 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SFTPBP07988 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.2■□□□□ 0.34
SFTPBP07988 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.2■□□□□ 0.34
SFTPBP07988 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SFTPBP07988 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SFTPBP07988 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SFTPBP07988 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SFTPBP07988 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SFTPBP07988 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SFTPBP07988 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.2■□□□□ 0.34
SFTPBP07988 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SFTPBP07988 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.2■□□□□ 0.34
SFTPBP07988 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SFTPBP07988 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms