Protein–RNA interactions for Protein: P47171

HIR3, Histone transcription regulator 3, yeastyeast

Predictions only

Length 1,648 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HIR3P47171 YBR178WYBR178W 375 nt-4.75□□□□□ -3.17
HIR3P47171 snR80snR80 171 nt-4.78□□□□□ -3.17
HIR3P47171 YJL150WYJL150W 303 nt-4.79□□□□□ -3.18
HIR3P47171 snR41snR41 95 nt-4.79□□□□□ -3.18
HIR3P47171 YLR406C-AYLR406C-A 150 nt-4.8□□□□□ -3.18
HIR3P47171 YFL032WYFL032W 321 nt-4.82□□□□□ -3.18
HIR3P47171 tM(CAU)Q2tM(CAU)Q2 78 nt-4.85□□□□□ -3.19
HIR3P47171 MPC1YGL080W 393 nt-4.9□□□□□ -3.19
HIR3P47171 YOR335W-AYOR335W-A 81 nt-4.9□□□□□ -3.19
HIR3P47171 YKL106C-AYKL106C-A 120 nt-4.95□□□□□ -3.2
HIR3P47171 YLR299C-AYLR299C-A 93 nt-4.99□□□□□ -3.21
HIR3P47171 RPL41BYDL133C-A 78 nt-5□□□□□ -3.21
HIR3P47171 ATP6Q0085 780 nt-5.01□□□□□ -3.21
HIR3P47171 CSN9YDR179C 489 nt-5.06□□□□□ -3.22
HIR3P47171 BIL1YOR304C-A 231 nt-5.11□□□□□ -3.23
HIR3P47171 YOR381W-AYOR381W-A 168 nt-5.11□□□□□ -3.23
HIR3P47171 YAL016C-BYAL016C-B 186 nt-5.12□□□□□ -3.23
HIR3P47171 YDR413CYDR413C 576 nt-5.14□□□□□ -3.23
HIR3P47171 snR78snR78 87 nt-5.19□□□□□ -3.24
HIR3P47171 snR87snR87 109 nt-5.19□□□□□ -3.24
HIR3P47171 Q0255Q0255 1419 nt-5.23□□□□□ -3.25
HIR3P47171 snR34snR34 203 nt-5.28□□□□□ -3.25
HIR3P47171 YOR329W-AYOR329W-A 210 nt-5.33□□□□□ -3.26
HIR3P47171 snR60snR60 104 nt-5.39□□□□□ -3.27
HIR3P47171 YNL324WYNL324W 396 nt-5.41□□□□□ -3.27
HIR3P47171 YNL028WYNL028W 318 nt-5.41□□□□□ -3.28
HIR3P47171 YGL041CYGL041C 204 nt-5.44□□□□□ -3.28
HIR3P47171 YBR109W-AYBR109W-A 225 nt-5.46□□□□□ -3.28
HIR3P47171 snR54snR54 86 nt-5.46□□□□□ -3.28
HIR3P47171 YGR035CYGR035C 351 nt-5.48□□□□□ -3.29
HIR3P47171 YEL014CYEL014C 306 nt-5.51□□□□□ -3.29
HIR3P47171 YLR222C-AYLR222C-A 231 nt-5.51□□□□□ -3.29
HIR3P47171 YLR434CYLR434C 384 nt-5.6□□□□□ -3.31
HIR3P47171 YER006C-AYER006C-A 318 nt-5.65□□□□□ -3.31
HIR3P47171 YMR001C-AYMR001C-A 231 nt-5.66□□□□□ -3.32
HIR3P47171 YOR102WYOR102W 351 nt-5.68□□□□□ -3.32
HIR3P47171 YJL136W-AYJL136W-A 84 nt-5.7□□□□□ -3.32
HIR3P47171 YLR120W-AYLR120W-A 102 nt-5.7□□□□□ -3.32
HIR3P47171 YDR406W-AYDR406W-A 246 nt-5.74□□□□□ -3.33
HIR3P47171 RPL41AYDL184C 78 nt-5.76□□□□□ -3.33
HIR3P47171 YBR296C-AYBR296C-A 120 nt-5.8□□□□□ -3.34
HIR3P47171 snR38snR38 95 nt-5.85□□□□□ -3.35
HIR3P47171 snR85snR85 171 nt-5.92□□□□□ -3.36
HIR3P47171 YNL097C-BYNL097C-B 123 nt-5.93□□□□□ -3.36
HIR3P47171 YGL188C-AYGL188C-A 141 nt-5.99□□□□□ -3.37
HIR3P47171 HTL1YCR020W-B 237 nt-6.03□□□□□ -3.38
HIR3P47171 tV(UAC)QtV(UAC)Q 76 nt-6.03□□□□□ -3.38
HIR3P47171 tW(UCA)QtW(UCA)Q 74 nt-6.05□□□□□ -3.38
HIR3P47171 YKL118WYKL118W 312 nt-6.05□□□□□ -3.38
HIR3P47171 GIM4YEL003W 336 nt-6.07□□□□□ -3.38
HIR3P47171 snR48snR48 113 nt-6.1□□□□□ -3.39
HIR3P47171 snR56snR56 88 nt-6.12□□□□□ -3.39
HIR3P47171 YBR131C-AYBR131C-A 90 nt-6.15□□□□□ -3.39
HIR3P47171 snR58snR58 96 nt-6.16□□□□□ -3.4
HIR3P47171 YCR095W-AYCR095W-A 159 nt-6.2□□□□□ -3.4
HIR3P47171 YDL114W-AYDL114W-A 114 nt-6.21□□□□□ -3.4
HIR3P47171 YBL100W-CYBL100W-C 120 nt-6.21□□□□□ -3.4
HIR3P47171 YDR157WYDR157W 402 nt-6.25□□□□□ -3.41
HIR3P47171 tL(UAA)QtL(UAA)Q 85 nt-6.25□□□□□ -3.41
HIR3P47171 YDR118W-AYDR118W-A 117 nt-6.35□□□□□ -3.43
HIR3P47171 YAL066WYAL066W 309 nt-6.35□□□□□ -3.43
HIR3P47171 RPL39YJL189W 156 nt-6.36□□□□□ -3.43
HIR3P47171 YLR412C-AYLR412C-A 207 nt-6.38□□□□□ -3.43
HIR3P47171 tF(GAA)QtF(GAA)Q 75 nt-6.4□□□□□ -3.43
HIR3P47171 YNL122CYNL122C 348 nt-6.47□□□□□ -3.44
HIR3P47171 YKL096C-BYKL096C-B 150 nt-6.5□□□□□ -3.45
HIR3P47171 YNL170WYNL170W 396 nt-6.54□□□□□ -3.46
HIR3P47171 YAL063C-AYAL063C-A 291 nt-6.54□□□□□ -3.46
HIR3P47171 YPL038W-AYPL038W-A 192 nt-6.64□□□□□ -3.47
HIR3P47171 YDR183C-AYDR183C-A 258 nt-6.71□□□□□ -3.48
HIR3P47171 YOL164W-AYOL164W-A 183 nt-6.71□□□□□ -3.48
HIR3P47171 YDL159W-AYDL159W-A 132 nt-6.74□□□□□ -3.49
HIR3P47171 YBL053WYBL053W 375 nt-6.76□□□□□ -3.49
HIR3P47171 snR47snR47 99 nt-6.76□□□□□ -3.49
HIR3P47171 YBL071C-BYBL071C-B 99 nt-6.78□□□□□ -3.49
HIR3P47171 YJL047C-AYJL047C-A 135 nt-6.79□□□□□ -3.5
HIR3P47171 YHL015W-AYHL015W-A 84 nt-6.89□□□□□ -3.51
HIR3P47171 YHR175W-AYHR175W-A 150 nt-6.9□□□□□ -3.51
HIR3P47171 SOM1YEL059C-A 225 nt-6.9□□□□□ -3.51
HIR3P47171 SPG3YDR504C 384 nt-6.91□□□□□ -3.52
HIR3P47171 YKL123WYKL123W 381 nt-6.94□□□□□ -3.52
HIR3P47171 YKL225WYKL225W 348 nt-6.98□□□□□ -3.53
HIR3P47171 YGR151CYGR151C 336 nt-7.05□□□□□ -3.54
HIR3P47171 snR52snR52 92 nt-7.09□□□□□ -3.54
HIR3P47171 YEL050W-AYEL050W-A 192 nt-7.12□□□□□ -3.55
HIR3P47171 YOR302WYOR302W 78 nt-7.23□□□□□ -3.57
HIR3P47171 tS(GCU)Q1tS(GCU)Q1 86 nt-7.31□□□□□ -3.58
HIR3P47171 YDR034C-AYDR034C-A 177 nt-7.34□□□□□ -3.59
HIR3P47171 tC(GCA)QtC(GCA)Q 76 nt-7.37□□□□□ -3.59
HIR3P47171 YGR122C-AYGR122C-A 129 nt-7.37□□□□□ -3.59
HIR3P47171 YAL037C-AYAL037C-A 93 nt-7.37□□□□□ -3.59
HIR3P47171 YLR285C-AYLR285C-A 171 nt-7.45□□□□□ -3.6
HIR3P47171 YNL277W-AYNL277W-A 189 nt-7.47□□□□□ -3.61
HIR3P47171 YNR025CYNR025C 360 nt-7.94□□□□□ -3.68
HIR3P47171 Q0143Q0143 153 nt-8.03□□□□□ -3.7
HIR3P47171 YOR225WYOR225W 330 nt-8.08□□□□□ -3.7
HIR3P47171 snR40snR40 97 nt-8.09□□□□□ -3.7
HIR3P47171 YGL007C-AYGL007C-A 87 nt-8.12□□□□□ -3.71
HIR3P47171 YDL240C-AYDL240C-A 138 nt-8.24□□□□□ -3.73
HIR3P47171 YLR294CYLR294C 330 nt-8.27□□□□□ -3.73
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms