Protein–RNA interactions for Protein: Q8NG66

NEK11, Serine/threonine-protein kinase Nek11, humanhuman

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11Q8NG66 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.23■■■□□ 2.11
NEK11Q8NG66 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
NEK11Q8NG66 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
NEK11Q8NG66 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
NEK11Q8NG66 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
NEK11Q8NG66 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
NEK11Q8NG66 DRD5P2-201ENST00000421395 2012 ntBASIC28.21■■■□□ 2.11
NEK11Q8NG66 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.21■■■□□ 2.11
NEK11Q8NG66 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
NEK11Q8NG66 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.21■■■□□ 2.11
NEK11Q8NG66 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.2■■■□□ 2.11
NEK11Q8NG66 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC28.2■■■□□ 2.1
NEK11Q8NG66 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
NEK11Q8NG66 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
NEK11Q8NG66 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
NEK11Q8NG66 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC28.19■■■□□ 2.1
NEK11Q8NG66 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
NEK11Q8NG66 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.19■■■□□ 2.1
NEK11Q8NG66 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
NEK11Q8NG66 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.17■■■□□ 2.1
NEK11Q8NG66 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC28.17■■■□□ 2.1
NEK11Q8NG66 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.17■■■□□ 2.1
NEK11Q8NG66 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.17■■■□□ 2.1
NEK11Q8NG66 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
NEK11Q8NG66 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
NEK11Q8NG66 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
NEK11Q8NG66 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
NEK11Q8NG66 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
NEK11Q8NG66 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
NEK11Q8NG66 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.13■■■□□ 2.09
NEK11Q8NG66 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
NEK11Q8NG66 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
NEK11Q8NG66 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.12■■■□□ 2.09
NEK11Q8NG66 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
NEK11Q8NG66 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
NEK11Q8NG66 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
NEK11Q8NG66 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
NEK11Q8NG66 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC28.1■■■□□ 2.09
NEK11Q8NG66 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
NEK11Q8NG66 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
NEK11Q8NG66 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
NEK11Q8NG66 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
NEK11Q8NG66 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
NEK11Q8NG66 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.08■■■□□ 2.09
NEK11Q8NG66 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
NEK11Q8NG66 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC28.08■■■□□ 2.09
NEK11Q8NG66 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.08■■■□□ 2.08
NEK11Q8NG66 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
NEK11Q8NG66 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
NEK11Q8NG66 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
NEK11Q8NG66 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
NEK11Q8NG66 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.04■■■□□ 2.08
NEK11Q8NG66 AC127502.1-201ENST00000399971 1502 ntBASIC28.04■■■□□ 2.08
NEK11Q8NG66 AP004833.2-201ENST00000532228 1454 ntBASIC28.04■■■□□ 2.08
NEK11Q8NG66 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
NEK11Q8NG66 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
NEK11Q8NG66 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
NEK11Q8NG66 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
NEK11Q8NG66 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
NEK11Q8NG66 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
NEK11Q8NG66 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
NEK11Q8NG66 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
NEK11Q8NG66 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC28.02■■■□□ 2.08
NEK11Q8NG66 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
NEK11Q8NG66 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
NEK11Q8NG66 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.02■■■□□ 2.08
NEK11Q8NG66 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.02■■■□□ 2.08
NEK11Q8NG66 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
NEK11Q8NG66 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.01■■■□□ 2.07
NEK11Q8NG66 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
NEK11Q8NG66 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
NEK11Q8NG66 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC28■■■□□ 2.07
NEK11Q8NG66 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC28■■■□□ 2.07
NEK11Q8NG66 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
NEK11Q8NG66 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.99■■■□□ 2.07
NEK11Q8NG66 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.99■■■□□ 2.07
NEK11Q8NG66 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
NEK11Q8NG66 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.99■■■□□ 2.07
NEK11Q8NG66 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
NEK11Q8NG66 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
NEK11Q8NG66 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.99■■■□□ 2.07
NEK11Q8NG66 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
NEK11Q8NG66 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
NEK11Q8NG66 MIR762-201ENST00000390236 83 ntBASIC27.98■■■□□ 2.07
NEK11Q8NG66 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
NEK11Q8NG66 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
NEK11Q8NG66 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
NEK11Q8NG66 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.98■■■□□ 2.07
NEK11Q8NG66 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
NEK11Q8NG66 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
NEK11Q8NG66 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
NEK11Q8NG66 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
NEK11Q8NG66 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.97■■■□□ 2.07
NEK11Q8NG66 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.96■■■□□ 2.07
NEK11Q8NG66 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
NEK11Q8NG66 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
NEK11Q8NG66 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.06
NEK11Q8NG66 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
NEK11Q8NG66 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
NEK11Q8NG66 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms