Protein–RNA interactions for Protein: Q8NEN9

PDZD8, PDZ domain-containing protein 8, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8Q8NEN9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PDZD8Q8NEN9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PDZD8Q8NEN9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.24■■□□□ 1.95
PDZD8Q8NEN9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
PDZD8Q8NEN9 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PDZD8Q8NEN9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
PDZD8Q8NEN9 MIR3648-2-201ENST00000581792 180 ntBASIC27.23■■□□□ 1.95
PDZD8Q8NEN9 MIR3648-1-201ENST00000615959 180 ntBASIC27.23■■□□□ 1.95
PDZD8Q8NEN9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.23■■□□□ 1.95
PDZD8Q8NEN9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.23■■□□□ 1.95
PDZD8Q8NEN9 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PDZD8Q8NEN9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PDZD8Q8NEN9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
PDZD8Q8NEN9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
PDZD8Q8NEN9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
PDZD8Q8NEN9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
PDZD8Q8NEN9 AC127502.1-201ENST00000399971 1502 ntBASIC27.21■■□□□ 1.95
PDZD8Q8NEN9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.21■■□□□ 1.95
PDZD8Q8NEN9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PDZD8Q8NEN9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.21■■□□□ 1.95
PDZD8Q8NEN9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.21■■□□□ 1.95
PDZD8Q8NEN9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
PDZD8Q8NEN9 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.19■■□□□ 1.94
PDZD8Q8NEN9 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PDZD8Q8NEN9 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.19■■□□□ 1.94
PDZD8Q8NEN9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PDZD8Q8NEN9 DUX4L13-201ENST00000554103 1267 ntBASIC27.19■■□□□ 1.94
PDZD8Q8NEN9 DUX4L15-201ENST00000611059 1267 ntBASIC27.19■■□□□ 1.94
PDZD8Q8NEN9 DUX4L23-201ENST00000615195 1269 ntBASIC27.19■■□□□ 1.94
PDZD8Q8NEN9 DUX4L24-201ENST00000617576 1269 ntBASIC27.19■■□□□ 1.94
PDZD8Q8NEN9 DUX4L22-201ENST00000618238 1269 ntBASIC27.19■■□□□ 1.94
PDZD8Q8NEN9 DUX4L20-201ENST00000619712 1269 ntBASIC27.19■■□□□ 1.94
PDZD8Q8NEN9 DUX4L21-201ENST00000622058 1269 ntBASIC27.19■■□□□ 1.94
PDZD8Q8NEN9 DUX4L10-201ENST00000622460 1267 ntBASIC27.19■■□□□ 1.94
PDZD8Q8NEN9 CR559946.2-201ENST00000623684 991 ntBASIC27.19■■□□□ 1.94
PDZD8Q8NEN9 DUX4L25-201ENST00000624915 1269 ntBASIC27.19■■□□□ 1.94
PDZD8Q8NEN9 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
PDZD8Q8NEN9 AC016575.1-201ENST00000607026 382 ntBASIC27.18■■□□□ 1.94
PDZD8Q8NEN9 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.17■■□□□ 1.94
PDZD8Q8NEN9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PDZD8Q8NEN9 MIR639-201ENST00000384974 98 ntBASIC27.17■■□□□ 1.94
PDZD8Q8NEN9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PDZD8Q8NEN9 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PDZD8Q8NEN9 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.16■■□□□ 1.94
PDZD8Q8NEN9 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.15■■□□□ 1.94
PDZD8Q8NEN9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
PDZD8Q8NEN9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PDZD8Q8NEN9 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
PDZD8Q8NEN9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PDZD8Q8NEN9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.14■■□□□ 1.94
PDZD8Q8NEN9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.14■■□□□ 1.94
PDZD8Q8NEN9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.14■■□□□ 1.94
PDZD8Q8NEN9 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.93
PDZD8Q8NEN9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.13■■□□□ 1.93
PDZD8Q8NEN9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PDZD8Q8NEN9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PDZD8Q8NEN9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PDZD8Q8NEN9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PDZD8Q8NEN9 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.11■■□□□ 1.93
PDZD8Q8NEN9 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.11■■□□□ 1.93
PDZD8Q8NEN9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.11■■□□□ 1.93
PDZD8Q8NEN9 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PDZD8Q8NEN9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.09■■□□□ 1.93
PDZD8Q8NEN9 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.09■■□□□ 1.93
PDZD8Q8NEN9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
PDZD8Q8NEN9 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
PDZD8Q8NEN9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
PDZD8Q8NEN9 ST7-AS1-201ENST00000456775 1889 ntBASIC27.08■■□□□ 1.93
PDZD8Q8NEN9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PDZD8Q8NEN9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
PDZD8Q8NEN9 MIR4449-201ENST00000578365 66 ntBASIC27.07■■□□□ 1.92
PDZD8Q8NEN9 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
PDZD8Q8NEN9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PDZD8Q8NEN9 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
PDZD8Q8NEN9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PDZD8Q8NEN9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
PDZD8Q8NEN9 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.06■■□□□ 1.92
PDZD8Q8NEN9 AC135983.2-203ENST00000454486 1613 ntBASIC27.05■■□□□ 1.92
PDZD8Q8NEN9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PDZD8Q8NEN9 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PDZD8Q8NEN9 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PDZD8Q8NEN9 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
PDZD8Q8NEN9 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PDZD8Q8NEN9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PDZD8Q8NEN9 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.02■■□□□ 1.92
PDZD8Q8NEN9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PDZD8Q8NEN9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
PDZD8Q8NEN9 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PDZD8Q8NEN9 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
PDZD8Q8NEN9 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PDZD8Q8NEN9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
PDZD8Q8NEN9 WHAMMP2-203ENST00000563942 1603 ntBASIC27■■□□□ 1.91
PDZD8Q8NEN9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PDZD8Q8NEN9 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
PDZD8Q8NEN9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PDZD8Q8NEN9 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PDZD8Q8NEN9 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PDZD8Q8NEN9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PDZD8Q8NEN9 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PDZD8Q8NEN9 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.97■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms