Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.3■■□□□ 1.96
SNX30Q5VWJ9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.3■■□□□ 1.96
SNX30Q5VWJ9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SNX30Q5VWJ9 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SNX30Q5VWJ9 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SNX30Q5VWJ9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SNX30Q5VWJ9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.28■■□□□ 1.96
SNX30Q5VWJ9 DUX4L11-201ENST00000611504 1267 ntBASIC27.28■■□□□ 1.96
SNX30Q5VWJ9 DUX4L12-201ENST00000614593 1267 ntBASIC27.28■■□□□ 1.96
SNX30Q5VWJ9 DUX4L14-201ENST00000621227 1267 ntBASIC27.28■■□□□ 1.96
SNX30Q5VWJ9 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SNX30Q5VWJ9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SNX30Q5VWJ9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SNX30Q5VWJ9 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SNX30Q5VWJ9 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SNX30Q5VWJ9 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
SNX30Q5VWJ9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.25■■□□□ 1.95
SNX30Q5VWJ9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.25■■□□□ 1.95
SNX30Q5VWJ9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SNX30Q5VWJ9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.24■■□□□ 1.95
SNX30Q5VWJ9 LINC00273-201ENST00000539813 1452 ntBASIC27.24■■□□□ 1.95
SNX30Q5VWJ9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
SNX30Q5VWJ9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.23■■□□□ 1.95
SNX30Q5VWJ9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.23■■□□□ 1.95
SNX30Q5VWJ9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.22■■□□□ 1.95
SNX30Q5VWJ9 HLA-V-202ENST00000446817 847 ntBASIC27.22■■□□□ 1.95
SNX30Q5VWJ9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.21■■□□□ 1.95
SNX30Q5VWJ9 MIR3648-2-201ENST00000581792 180 ntBASIC27.21■■□□□ 1.95
SNX30Q5VWJ9 MIR3648-1-201ENST00000615959 180 ntBASIC27.21■■□□□ 1.95
SNX30Q5VWJ9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.2■■□□□ 1.94
SNX30Q5VWJ9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.19■■□□□ 1.94
SNX30Q5VWJ9 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
SNX30Q5VWJ9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SNX30Q5VWJ9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
SNX30Q5VWJ9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SNX30Q5VWJ9 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SNX30Q5VWJ9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
SNX30Q5VWJ9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
SNX30Q5VWJ9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.18■■□□□ 1.94
SNX30Q5VWJ9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.18■■□□□ 1.94
SNX30Q5VWJ9 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SNX30Q5VWJ9 AC127502.1-201ENST00000399971 1502 ntBASIC27.17■■□□□ 1.94
SNX30Q5VWJ9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SNX30Q5VWJ9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SNX30Q5VWJ9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.17■■□□□ 1.94
SNX30Q5VWJ9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.17■■□□□ 1.94
SNX30Q5VWJ9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.16■■□□□ 1.94
SNX30Q5VWJ9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SNX30Q5VWJ9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.16■■□□□ 1.94
SNX30Q5VWJ9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SNX30Q5VWJ9 DUX4L13-201ENST00000554103 1267 ntBASIC27.16■■□□□ 1.94
SNX30Q5VWJ9 DUX4L15-201ENST00000611059 1267 ntBASIC27.16■■□□□ 1.94
SNX30Q5VWJ9 DUX4L23-201ENST00000615195 1269 ntBASIC27.16■■□□□ 1.94
SNX30Q5VWJ9 DUX4L24-201ENST00000617576 1269 ntBASIC27.16■■□□□ 1.94
SNX30Q5VWJ9 DUX4L22-201ENST00000618238 1269 ntBASIC27.16■■□□□ 1.94
SNX30Q5VWJ9 DUX4L20-201ENST00000619712 1269 ntBASIC27.16■■□□□ 1.94
SNX30Q5VWJ9 DUX4L21-201ENST00000622058 1269 ntBASIC27.16■■□□□ 1.94
SNX30Q5VWJ9 DUX4L10-201ENST00000622460 1267 ntBASIC27.16■■□□□ 1.94
SNX30Q5VWJ9 CR559946.2-201ENST00000623684 991 ntBASIC27.16■■□□□ 1.94
SNX30Q5VWJ9 DUX4L25-201ENST00000624915 1269 ntBASIC27.16■■□□□ 1.94
SNX30Q5VWJ9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
SNX30Q5VWJ9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SNX30Q5VWJ9 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SNX30Q5VWJ9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.15■■□□□ 1.94
SNX30Q5VWJ9 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SNX30Q5VWJ9 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.94
SNX30Q5VWJ9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.14■■□□□ 1.94
SNX30Q5VWJ9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.14■■□□□ 1.94
SNX30Q5VWJ9 MIR639-201ENST00000384974 98 ntBASIC27.14■■□□□ 1.94
SNX30Q5VWJ9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.14■■□□□ 1.94
SNX30Q5VWJ9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.13■■□□□ 1.93
SNX30Q5VWJ9 AC016575.1-201ENST00000607026 382 ntBASIC27.13■■□□□ 1.93
SNX30Q5VWJ9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SNX30Q5VWJ9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SNX30Q5VWJ9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SNX30Q5VWJ9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.1■■□□□ 1.93
SNX30Q5VWJ9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.1■■□□□ 1.93
SNX30Q5VWJ9 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
SNX30Q5VWJ9 ST7-AS1-201ENST00000456775 1889 ntBASIC27.1■■□□□ 1.93
SNX30Q5VWJ9 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
SNX30Q5VWJ9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNX30Q5VWJ9 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.09■■□□□ 1.93
SNX30Q5VWJ9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNX30Q5VWJ9 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SNX30Q5VWJ9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SNX30Q5VWJ9 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SNX30Q5VWJ9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.07■■□□□ 1.92
SNX30Q5VWJ9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SNX30Q5VWJ9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
SNX30Q5VWJ9 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
SNX30Q5VWJ9 MIR4449-201ENST00000578365 66 ntBASIC27.06■■□□□ 1.92
SNX30Q5VWJ9 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SNX30Q5VWJ9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SNX30Q5VWJ9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SNX30Q5VWJ9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SNX30Q5VWJ9 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.05■■□□□ 1.92
SNX30Q5VWJ9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SNX30Q5VWJ9 AC135983.2-203ENST00000454486 1613 ntBASIC27.05■■□□□ 1.92
SNX30Q5VWJ9 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
SNX30Q5VWJ9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms