Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC40.34■■■■■ 4.05
CDC42BPAQ5VT25 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC40.34■■■■■ 4.05
CDC42BPAQ5VT25 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC40.34■■■■■ 4.05
CDC42BPAQ5VT25 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC40.34■■■■■ 4.05
CDC42BPAQ5VT25 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC40.33■■■■■ 4.05
CDC42BPAQ5VT25 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC40.33■■■■■ 4.05
CDC42BPAQ5VT25 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC40.33■■■■■ 4.05
CDC42BPAQ5VT25 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC40.33■■■■■ 4.05
CDC42BPAQ5VT25 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC40.31■■■■■ 4.04
CDC42BPAQ5VT25 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC40.31■■■■■ 4.04
CDC42BPAQ5VT25 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC40.31■■■■■ 4.04
CDC42BPAQ5VT25 CHST11-202ENST00000546689 756 ntTSL 2 BASIC40.3■■■■■ 4.04
CDC42BPAQ5VT25 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC40.29■■■■■ 4.04
CDC42BPAQ5VT25 RARRES2P2-201ENST00000394842 485 ntBASIC40.29■■■■■ 4.04
CDC42BPAQ5VT25 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC40.29■■■■■ 4.04
CDC42BPAQ5VT25 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC40.29■■■■■ 4.04
CDC42BPAQ5VT25 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC40.29■■■■■ 4.04
CDC42BPAQ5VT25 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC40.28■■■■■ 4.04
CDC42BPAQ5VT25 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC40.28■■■■■ 4.04
CDC42BPAQ5VT25 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC40.28■■■■■ 4.04
CDC42BPAQ5VT25 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC40.28■■■■■ 4.04
CDC42BPAQ5VT25 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC40.28■■■■■ 4.04
CDC42BPAQ5VT25 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC40.27■■■■■ 4.04
CDC42BPAQ5VT25 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC40.27■■■■■ 4.04
CDC42BPAQ5VT25 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC40.27■■■■■ 4.04
CDC42BPAQ5VT25 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC40.26■■■■■ 4.04
CDC42BPAQ5VT25 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC40.25■■■■■ 4.03
CDC42BPAQ5VT25 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC40.25■■■■■ 4.03
CDC42BPAQ5VT25 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC40.23■■■■■ 4.03
CDC42BPAQ5VT25 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC40.22■■■■■ 4.03
CDC42BPAQ5VT25 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC40.2■■■■■ 4.03
CDC42BPAQ5VT25 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC40.2■■■■■ 4.03
CDC42BPAQ5VT25 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC40.2■■■■■ 4.03
CDC42BPAQ5VT25 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC40.19■■■■■ 4.02
CDC42BPAQ5VT25 GPX1-201ENST00000419349 1106 ntBASIC40.18■■■■■ 4.02
CDC42BPAQ5VT25 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC40.18■■■■■ 4.02
CDC42BPAQ5VT25 ABHD17AP5-201ENST00000580133 923 ntBASIC40.18■■■■■ 4.02
CDC42BPAQ5VT25 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC40.18■■■■■ 4.02
CDC42BPAQ5VT25 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC40.17■■■■■ 4.02
CDC42BPAQ5VT25 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC40.17■■■■■ 4.02
CDC42BPAQ5VT25 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC40.13■■■■■ 4.02
CDC42BPAQ5VT25 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC40.13■■■■■ 4.02
CDC42BPAQ5VT25 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC40.13■■■■■ 4.01
CDC42BPAQ5VT25 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC40.13■■■■■ 4.01
CDC42BPAQ5VT25 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC40.13■■■■■ 4.01
CDC42BPAQ5VT25 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC40.12■■■■■ 4.01
CDC42BPAQ5VT25 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC40.12■■■■■ 4.01
CDC42BPAQ5VT25 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC40.12■■■■■ 4.01
CDC42BPAQ5VT25 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC40.11■■■■■ 4.01
CDC42BPAQ5VT25 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC40.1■■■■■ 4.01
CDC42BPAQ5VT25 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC40.1■■■■■ 4.01
CDC42BPAQ5VT25 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC40.09■■■■■ 4.01
CDC42BPAQ5VT25 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC40.07■■■■■ 4
CDC42BPAQ5VT25 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC40.06■■■■■ 4
CDC42BPAQ5VT25 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC40.06■■■■■ 4
CDC42BPAQ5VT25 TPT1-202ENST00000379055 948 ntTSL 2 BASIC40.04■■■■■ 4
CDC42BPAQ5VT25 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC40.04■■■■■ 4
CDC42BPAQ5VT25 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC40.03■■■■■ 4
CDC42BPAQ5VT25 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC40.02■■■■■ 4
CDC42BPAQ5VT25 AC135983.2-203ENST00000454486 1613 ntBASIC40.01■■■■■ 4
CDC42BPAQ5VT25 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC40.01■■■■■ 4
CDC42BPAQ5VT25 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC40■■■■□ 3.99
CDC42BPAQ5VT25 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC40■■■■□ 3.99
CDC42BPAQ5VT25 WHAMMP2-203ENST00000563942 1603 ntBASIC40■■■■□ 3.99
CDC42BPAQ5VT25 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC39.99■■■■□ 3.99
CDC42BPAQ5VT25 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC39.99■■■■□ 3.99
CDC42BPAQ5VT25 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC39.99■■■■□ 3.99
CDC42BPAQ5VT25 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC39.96■■■■□ 3.99
CDC42BPAQ5VT25 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC39.96■■■■□ 3.99
CDC42BPAQ5VT25 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC39.95■■■■□ 3.99
CDC42BPAQ5VT25 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC39.95■■■■□ 3.99
CDC42BPAQ5VT25 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC39.95■■■■□ 3.99
CDC42BPAQ5VT25 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC39.94■■■■□ 3.98
CDC42BPAQ5VT25 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
CDC42BPAQ5VT25 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC39.93■■■■□ 3.98
CDC42BPAQ5VT25 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC39.93■■■■□ 3.98
CDC42BPAQ5VT25 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC39.93■■■■□ 3.98
CDC42BPAQ5VT25 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
CDC42BPAQ5VT25 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC39.91■■■■□ 3.98
CDC42BPAQ5VT25 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC39.9■■■■□ 3.98
CDC42BPAQ5VT25 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC39.9■■■■□ 3.98
CDC42BPAQ5VT25 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC39.89■■■■□ 3.98
CDC42BPAQ5VT25 RNF126P1-201ENST00000567452 1320 ntBASIC39.89■■■■□ 3.98
CDC42BPAQ5VT25 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC39.88■■■■□ 3.97
CDC42BPAQ5VT25 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC39.86■■■■□ 3.97
CDC42BPAQ5VT25 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC39.85■■■■□ 3.97
CDC42BPAQ5VT25 AC127502.1-201ENST00000399971 1502 ntBASIC39.85■■■■□ 3.97
CDC42BPAQ5VT25 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC39.85■■■■□ 3.97
CDC42BPAQ5VT25 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC39.84■■■■□ 3.97
CDC42BPAQ5VT25 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC39.84■■■■□ 3.97
CDC42BPAQ5VT25 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC39.84■■■■□ 3.97
CDC42BPAQ5VT25 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC39.83■■■■□ 3.97
CDC42BPAQ5VT25 CEP120-209ENST00000515110 606 ntTSL 3 BASIC39.83■■■■□ 3.97
CDC42BPAQ5VT25 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC39.83■■■■□ 3.97
CDC42BPAQ5VT25 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC39.83■■■■□ 3.97
CDC42BPAQ5VT25 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.96
CDC42BPAQ5VT25 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
CDC42BPAQ5VT25 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC39.8■■■■□ 3.96
CDC42BPAQ5VT25 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC39.8■■■■□ 3.96
CDC42BPAQ5VT25 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC39.8■■■■□ 3.96
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms