Protein–RNA interactions for Protein: Q02863

UBP16, Ubiquitin carboxyl-terminal hydrolase 16, yeastyeast

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP16Q02863 MRS6YOR370C 1812 nt10.1□□□□□ -0.79
UBP16Q02863 KES1YPL145C 1305 nt10.08□□□□□ -0.8
UBP16Q02863 COQ8YGL119W 1506 nt10.08□□□□□ -0.8
UBP16Q02863 MRP1YDR347W 966 nt10.07□□□□□ -0.8
UBP16Q02863 REX2YLR059C 810 nt10.07□□□□□ -0.8
UBP16Q02863 CMP2YML057W 1815 nt10.05□□□□□ -0.8
UBP16Q02863 tL(UAA)B1tL(UAA)B1 84 nt10.05□□□□□ -0.8
UBP16Q02863 tL(UAA)B2tL(UAA)B2 84 nt10.05□□□□□ -0.8
UBP16Q02863 tL(UAA)DtL(UAA)D 84 nt10.05□□□□□ -0.8
UBP16Q02863 SUP51tL(UAA)J 84 nt10.05□□□□□ -0.8
UBP16Q02863 tL(UAA)KtL(UAA)K 84 nt10.05□□□□□ -0.8
UBP16Q02863 tL(UAA)LtL(UAA)L 84 nt10.05□□□□□ -0.8
UBP16Q02863 tL(UAA)NtL(UAA)N 84 nt10.05□□□□□ -0.8
UBP16Q02863 CRC1YOR100C 984 nt10.05□□□□□ -0.8
UBP16Q02863 YKL133CYKL133C 1392 nt10.04□□□□□ -0.8
UBP16Q02863 EDC2YER035W 438 nt10.04□□□□□ -0.8
UBP16Q02863 YMR206WYMR206W 942 nt10.04□□□□□ -0.8
UBP16Q02863 HOG1YLR113W 1308 nt10.04□□□□□ -0.8
UBP16Q02863 SGA1YIL099W 1650 nt10.03□□□□□ -0.8
UBP16Q02863 RDN37-1RDN37-1 5354 nt10.03□□□□□ -0.8
UBP16Q02863 RDN37-2RDN37-2 5354 nt10.03□□□□□ -0.8
UBP16Q02863 ZAP1YJL056C 2643 nt10.03□□□□□ -0.8
UBP16Q02863 YMR265CYMR265C 1386 nt10.02□□□□□ -0.8
UBP16Q02863 HAP5YOR358W 729 nt10.02□□□□□ -0.81
UBP16Q02863 PET18YCR020C 648 nt10.01□□□□□ -0.81
UBP16Q02863 RIM2YBR192W 1134 nt9.99□□□□□ -0.81
UBP16Q02863 SRP54YPR088C 1626 nt9.99□□□□□ -0.81
UBP16Q02863 SAN1YDR143C 1833 nt9.98□□□□□ -0.81
UBP16Q02863 UTR5YEL035C 501 nt9.98□□□□□ -0.81
UBP16Q02863 VMA11YPL234C 495 nt9.98□□□□□ -0.81
UBP16Q02863 LSP1YPL004C 1026 nt9.97□□□□□ -0.81
UBP16Q02863 TOS1YBR162C 1368 nt9.97□□□□□ -0.81
UBP16Q02863 GDH1YOR375C 1365 nt9.96□□□□□ -0.82
UBP16Q02863 KGD2YDR148C 1392 nt9.94□□□□□ -0.82
UBP16Q02863 ADA2YDR448W 1305 nt9.94□□□□□ -0.82
UBP16Q02863 YFR020WYFR020W 699 nt9.94□□□□□ -0.82
UBP16Q02863 snR31snR31 225 nt9.94□□□□□ -0.82
UBP16Q02863 SNX3YOR357C 489 nt9.93□□□□□ -0.82
UBP16Q02863 UGP1YKL035W 1500 nt9.92□□□□□ -0.82
UBP16Q02863 BAP3YDR046C 1815 nt9.91□□□□□ -0.82
UBP16Q02863 YJR149WYJR149W 1215 nt9.91□□□□□ -0.82
UBP16Q02863 SDH8YBR269C 417 nt9.91□□□□□ -0.82
UBP16Q02863 RPD3YNL330C 1302 nt9.89□□□□□ -0.83
UBP16Q02863 YMR166CYMR166C 1107 nt9.89□□□□□ -0.83
UBP16Q02863 YPL247CYPL247C 1572 nt9.88□□□□□ -0.83
UBP16Q02863 RPN14YGL004C 1254 nt9.88□□□□□ -0.83
UBP16Q02863 PRE5YMR314W 705 nt9.88□□□□□ -0.83
UBP16Q02863 ELP4YPL101W 1371 nt9.88□□□□□ -0.83
UBP16Q02863 MFT1YML062C 1179 nt9.86□□□□□ -0.83
UBP16Q02863 TAD2YJL035C 753 nt9.85□□□□□ -0.83
UBP16Q02863 SSL2YIL143C 2532 nt9.85□□□□□ -0.83
UBP16Q02863 YPT11YNL304W 1254 nt9.84□□□□□ -0.83
UBP16Q02863 PTC6YCR079W 1329 nt9.82□□□□□ -0.84
UBP16Q02863 GAS1YMR307W 1680 nt9.81□□□□□ -0.84
UBP16Q02863 ADE1YAR015W 921 nt9.8□□□□□ -0.84
UBP16Q02863 CAK1YFL029C 1107 nt9.79□□□□□ -0.84
UBP16Q02863 DPL1YDR294C 1770 nt9.78□□□□□ -0.84
UBP16Q02863 HIS2YFR025C 1008 nt9.78□□□□□ -0.84
UBP16Q02863 SBP1YHL034C 885 nt9.78□□□□□ -0.84
UBP16Q02863 RSM7YJR113C 744 nt9.78□□□□□ -0.84
UBP16Q02863 YER156CYER156C 1017 nt9.77□□□□□ -0.85
UBP16Q02863 RRT14YIL127C 621 nt9.77□□□□□ -0.85
UBP16Q02863 YJL043WYJL043W 774 nt9.77□□□□□ -0.85
UBP16Q02863 RPC31YNL151C 756 nt9.77□□□□□ -0.85
UBP16Q02863 RPS6AYPL090C 711 nt9.77□□□□□ -0.85
UBP16Q02863 ODC1YPL134C 933 nt9.77□□□□□ -0.85
UBP16Q02863 RPS6BYBR181C 711 nt9.77□□□□□ -0.85
UBP16Q02863 PET494YNR045W 1470 nt9.77□□□□□ -0.85
UBP16Q02863 CWP2YKL096W-A 279 nt9.74□□□□□ -0.85
UBP16Q02863 HSL7YBR133C 2484 nt9.73□□□□□ -0.85
UBP16Q02863 FUS3YBL016W 1062 nt9.73□□□□□ -0.85
UBP16Q02863 BXI1YNL305C 894 nt9.72□□□□□ -0.85
UBP16Q02863 THI3YDL080C 1830 nt9.72□□□□□ -0.85
UBP16Q02863 OCH1YGL038C 1443 nt9.72□□□□□ -0.85
UBP16Q02863 YPR084WYPR084W 1371 nt9.68□□□□□ -0.86
UBP16Q02863 TDH1YJL052W 999 nt9.68□□□□□ -0.86
UBP16Q02863 YLR460CYLR460C 1131 nt9.68□□□□□ -0.86
UBP16Q02863 YMR316C-BYMR316C-B 309 nt9.68□□□□□ -0.86
UBP16Q02863 MET22YOL064C 1074 nt9.67□□□□□ -0.86
UBP16Q02863 NUP53YMR153W 1428 nt9.65□□□□□ -0.86
UBP16Q02863 RNA170RNA170 169 nt9.64□□□□□ -0.87
UBP16Q02863 GGA2YHR108W 1758 nt9.64□□□□□ -0.87
UBP16Q02863 CHS7YHR142W 951 nt9.63□□□□□ -0.87
UBP16Q02863 LEU4YNL104C 1860 nt9.63□□□□□ -0.87
UBP16Q02863 KRR1YCL059C 951 nt9.62□□□□□ -0.87
UBP16Q02863 GPM1YKL152C 744 nt9.62□□□□□ -0.87
UBP16Q02863 YIL168WYIL168W 384 nt9.61□□□□□ -0.87
UBP16Q02863 COS10YNR075W 1125 nt9.61□□□□□ -0.87
UBP16Q02863 RIM8YGL045W 1629 nt9.6□□□□□ -0.87
UBP16Q02863 MDM35YKL053C-A 261 nt9.6□□□□□ -0.87
UBP16Q02863 PDC6YGR087C 1692 nt9.59□□□□□ -0.87
UBP16Q02863 RPR1RPR1 369 nt9.59□□□□□ -0.87
UBP16Q02863 ATP2YJR121W 1536 nt9.59□□□□□ -0.87
UBP16Q02863 YDR467CYDR467C 327 nt9.57□□□□□ -0.88
UBP16Q02863 OLA1YBR025C 1185 nt9.57□□□□□ -0.88
UBP16Q02863 YMR209CYMR209C 1374 nt9.57□□□□□ -0.88
UBP16Q02863 RRT6YGL146C 936 nt9.55□□□□□ -0.88
UBP16Q02863 YGL114WYGL114W 2178 nt9.55□□□□□ -0.88
UBP16Q02863 tE(CUC)DtE(CUC)D 72 nt9.54□□□□□ -0.88
UBP16Q02863 tE(CUC)ItE(CUC)I 72 nt9.54□□□□□ -0.88
Retrieved 100 of 7,029 protein–RNA pairs in 39 ms