Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 YCP4YCR004C 744 nt8.26□□□□□ -1.09
LSM5P40089 snR31snR31 225 nt8.26□□□□□ -1.09
LSM5P40089 YCR025CYCR025C 411 nt8.25□□□□□ -1.09
LSM5P40089 RPN14YGL004C 1254 nt8.25□□□□□ -1.09
LSM5P40089 CWP2YKL096W-A 279 nt8.25□□□□□ -1.09
LSM5P40089 LSR1LSR1 1175 nt8.25□□□□□ -1.09
LSM5P40089 NAM8YHR086W 1572 nt8.25□□□□□ -1.09
LSM5P40089 MET1YKR069W 1782 nt8.25□□□□□ -1.09
LSM5P40089 RPD3YNL330C 1302 nt8.23□□□□□ -1.09
LSM5P40089 SWM1YDR260C 513 nt8.22□□□□□ -1.09
LSM5P40089 ODC1YPL134C 933 nt8.22□□□□□ -1.09
LSM5P40089 SDS24YBR214W 1584 nt8.22□□□□□ -1.09
LSM5P40089 SSL2YIL143C 2532 nt8.22□□□□□ -1.09
LSM5P40089 REX2YLR059C 810 nt8.21□□□□□ -1.1
LSM5P40089 CRC1YOR100C 984 nt8.21□□□□□ -1.1
LSM5P40089 SNX3YOR357C 489 nt8.21□□□□□ -1.1
LSM5P40089 KRR1YCL059C 951 nt8.2□□□□□ -1.1
LSM5P40089 YKR012CYKR012C 378 nt8.2□□□□□ -1.1
LSM5P40089 CYC3YAL039C 810 nt8.19□□□□□ -1.1
LSM5P40089 SAM50YNL026W 1455 nt8.19□□□□□ -1.1
LSM5P40089 HMG2YLR450W 3138 nt8.18□□□□□ -1.1
LSM5P40089 SAN1YDR143C 1833 nt8.18□□□□□ -1.1
LSM5P40089 YHR218WYHR218W 1812 nt8.18□□□□□ -1.1
LSM5P40089 MOB1YIL106W 945 nt8.18□□□□□ -1.1
LSM5P40089 YKL053WYKL053W 375 nt8.18□□□□□ -1.1
LSM5P40089 SRP102YKL154W 735 nt8.18□□□□□ -1.1
LSM5P40089 VBA3YCL069W 1377 nt8.18□□□□□ -1.1
LSM5P40089 LYS20YDL182W 1287 nt8.17□□□□□ -1.1
LSM5P40089 SER2YGR208W 930 nt8.17□□□□□ -1.1
LSM5P40089 YIA6YIL006W 1122 nt8.17□□□□□ -1.1
LSM5P40089 SRP54YPR088C 1626 nt8.16□□□□□ -1.1
LSM5P40089 ENO1YGR254W 1314 nt8.15□□□□□ -1.1
LSM5P40089 YHR131CYHR131C 2553 nt8.15□□□□□ -1.1
LSM5P40089 RIB1YBL033C 1038 nt8.15□□□□□ -1.1
LSM5P40089 MDM35YKL053C-A 261 nt8.14□□□□□ -1.11
LSM5P40089 PAB1YER165W 1734 nt8.14□□□□□ -1.11
LSM5P40089 HTS1YPR033C 1641 nt8.14□□□□□ -1.11
LSM5P40089 YPT11YNL304W 1254 nt8.13□□□□□ -1.11
LSM5P40089 RIM2YBR192W 1134 nt8.13□□□□□ -1.11
LSM5P40089 TPO4YOR273C 1980 nt8.13□□□□□ -1.11
LSM5P40089 CBK1YNL161W 2271 nt8.13□□□□□ -1.11
LSM5P40089 KGD2YDR148C 1392 nt8.12□□□□□ -1.11
LSM5P40089 NAS6YGR232W 687 nt8.12□□□□□ -1.11
LSM5P40089 RPC31YNL151C 756 nt8.12□□□□□ -1.11
LSM5P40089 MET8YBR213W 825 nt8.12□□□□□ -1.11
LSM5P40089 HXK1YFR053C 1458 nt8.12□□□□□ -1.11
LSM5P40089 ERO1YML130C 1692 nt8.1□□□□□ -1.11
LSM5P40089 ALD5YER073W 1563 nt8.09□□□□□ -1.11
LSM5P40089 DPL1YDR294C 1770 nt8.08□□□□□ -1.12
LSM5P40089 YFR020WYFR020W 699 nt8.08□□□□□ -1.12
LSM5P40089 YMR007WYMR007W 381 nt8.08□□□□□ -1.12
LSM5P40089 SBP1YHL034C 885 nt8.07□□□□□ -1.12
LSM5P40089 YLR280CYLR280C 351 nt8.07□□□□□ -1.12
LSM5P40089 YLR173WYLR173W 1827 nt8.07□□□□□ -1.12
LSM5P40089 HXT10YFL011W 1641 nt8.07□□□□□ -1.12
LSM5P40089 SOD2YHR008C 702 nt8.06□□□□□ -1.12
LSM5P40089 ERG6YML008C 1152 nt8.06□□□□□ -1.12
LSM5P40089 YGR210CYGR210C 1236 nt8.05□□□□□ -1.12
LSM5P40089 URA8YJR103W 1737 nt8.05□□□□□ -1.12
LSM5P40089 GAS1YMR307W 1680 nt8.05□□□□□ -1.12
LSM5P40089 ECM27YJR106W 2178 nt8.04□□□□□ -1.12
LSM5P40089 YOR072WYOR072W 315 nt8.04□□□□□ -1.12
LSM5P40089 PTC6YCR079W 1329 nt8.03□□□□□ -1.12
LSM5P40089 YRF1-3YGR296W 5580 nt8.03□□□□□ -1.12
LSM5P40089 YRF1-6YNL339C 5580 nt8.03□□□□□ -1.12
LSM5P40089 YRF1-7YPL283C 5580 nt8.03□□□□□ -1.12
LSM5P40089 YMR316C-BYMR316C-B 309 nt8.02□□□□□ -1.13
LSM5P40089 TGA1tA(UGC)A 73 nt8.01□□□□□ -1.13
LSM5P40089 tA(UGC)EtA(UGC)E 73 nt8.01□□□□□ -1.13
LSM5P40089 tA(UGC)GtA(UGC)G 73 nt8.01□□□□□ -1.13
LSM5P40089 tA(UGC)LtA(UGC)L 73 nt8.01□□□□□ -1.13
LSM5P40089 tA(UGC)OtA(UGC)O 73 nt8.01□□□□□ -1.13
LSM5P40089 RSM7YJR113C 744 nt8.01□□□□□ -1.13
LSM5P40089 RCR1YBR005W 642 nt8.01□□□□□ -1.13
LSM5P40089 YPL108WYPL108W 507 nt8.01□□□□□ -1.13
LSM5P40089 AAC3YBR085W 924 nt8.01□□□□□ -1.13
LSM5P40089 POP2YNR052C 1302 nt8.01□□□□□ -1.13
LSM5P40089 GGA2YHR108W 1758 nt7.99□□□□□ -1.13
LSM5P40089 THI3YDL080C 1830 nt7.99□□□□□ -1.13
LSM5P40089 MLS1YNL117W 1665 nt7.98□□□□□ -1.13
LSM5P40089 NBA1YOL070C 1506 nt7.98□□□□□ -1.13
LSM5P40089 YER152W-AYER152W-A 567 nt7.97□□□□□ -1.13
LSM5P40089 MGM101YJR144W 810 nt7.97□□□□□ -1.13
LSM5P40089 NSG2YNL156C 900 nt7.97□□□□□ -1.13
LSM5P40089 AGP3YFL055W 1677 nt7.97□□□□□ -1.13
LSM5P40089 SNU66YOR308C 1764 nt7.97□□□□□ -1.13
LSM5P40089 YMR166CYMR166C 1107 nt7.96□□□□□ -1.14
LSM5P40089 YJL160CYJL160C 864 nt7.95□□□□□ -1.14
LSM5P40089 GPM1YKL152C 744 nt7.95□□□□□ -1.14
LSM5P40089 LEU4YNL104C 1860 nt7.95□□□□□ -1.14
LSM5P40089 FCY1YPR062W 477 nt7.94□□□□□ -1.14
LSM5P40089 INH1YDL181W 258 nt7.93□□□□□ -1.14
LSM5P40089 tE(CUC)DtE(CUC)D 72 nt7.93□□□□□ -1.14
LSM5P40089 tE(CUC)ItE(CUC)I 72 nt7.93□□□□□ -1.14
LSM5P40089 YDR467CYDR467C 327 nt7.92□□□□□ -1.14
LSM5P40089 YLR460CYLR460C 1131 nt7.91□□□□□ -1.14
LSM5P40089 TMS1YDR105C 1422 nt7.89□□□□□ -1.15
LSM5P40089 MET22YOL064C 1074 nt7.89□□□□□ -1.15
LSM5P40089 CHS7YHR142W 951 nt7.88□□□□□ -1.15
LSM5P40089 RRT14YIL127C 621 nt7.88□□□□□ -1.15
Retrieved 100 of 7,029 protein–RNA pairs in 47.5 ms