Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 SWT21YNL187W 1074 nt8.37□□□□□ -1.07
RPH1P39956 HAP5YOR358W 729 nt8.37□□□□□ -1.07
RPH1P39956 MRS6YOR370C 1812 nt8.37□□□□□ -1.07
RPH1P39956 YMR265CYMR265C 1386 nt8.35□□□□□ -1.07
RPH1P39956 MET1YKR069W 1782 nt8.35□□□□□ -1.07
RPH1P39956 RPD3YNL330C 1302 nt8.35□□□□□ -1.07
RPH1P39956 SAM50YNL026W 1455 nt8.35□□□□□ -1.07
RPH1P39956 YCP4YCR004C 744 nt8.35□□□□□ -1.07
RPH1P39956 SSL2YIL143C 2532 nt8.35□□□□□ -1.07
RPH1P39956 CYC3YAL039C 810 nt8.34□□□□□ -1.07
RPH1P39956 YKL053WYKL053W 375 nt8.34□□□□□ -1.07
RPH1P39956 SNX3YOR357C 489 nt8.34□□□□□ -1.07
RPH1P39956 SUV3YPL029W 2214 nt8.34□□□□□ -1.07
RPH1P39956 SFL1YOR140W 2301 nt8.34□□□□□ -1.08
RPH1P39956 UFD1YGR048W 1086 nt8.32□□□□□ -1.08
RPH1P39956 CRC1YOR100C 984 nt8.32□□□□□ -1.08
RPH1P39956 ENO1YGR254W 1314 nt8.31□□□□□ -1.08
RPH1P39956 LYS20YDL182W 1287 nt8.31□□□□□ -1.08
RPH1P39956 REX2YLR059C 810 nt8.31□□□□□ -1.08
RPH1P39956 SDS24YBR214W 1584 nt8.31□□□□□ -1.08
RPH1P39956 SRP54YPR088C 1626 nt8.3□□□□□ -1.08
RPH1P39956 YIA6YIL006W 1122 nt8.3□□□□□ -1.08
RPH1P39956 TPN1YGL186C 1740 nt8.29□□□□□ -1.08
RPH1P39956 RIB1YBL033C 1038 nt8.29□□□□□ -1.08
RPH1P39956 SER2YGR208W 930 nt8.28□□□□□ -1.08
RPH1P39956 SOD2YHR008C 702 nt8.28□□□□□ -1.08
RPH1P39956 MDM35YKL053C-A 261 nt8.28□□□□□ -1.08
RPH1P39956 NBA1YOL070C 1506 nt8.27□□□□□ -1.09
RPH1P39956 VBA3YCL069W 1377 nt8.26□□□□□ -1.09
RPH1P39956 HEM14YER014W 1620 nt8.26□□□□□ -1.09
RPH1P39956 YLR280CYLR280C 351 nt8.26□□□□□ -1.09
RPH1P39956 LPD1YFL018C 1500 nt8.25□□□□□ -1.09
RPH1P39956 FIT1YDR534C 1587 nt8.24□□□□□ -1.09
RPH1P39956 HTS1YPR033C 1641 nt8.24□□□□□ -1.09
RPH1P39956 KGD2YDR148C 1392 nt8.23□□□□□ -1.09
RPH1P39956 KRR1YCL059C 951 nt8.23□□□□□ -1.09
RPH1P39956 ERG6YML008C 1152 nt8.23□□□□□ -1.09
RPH1P39956 YPT11YNL304W 1254 nt8.23□□□□□ -1.09
RPH1P39956 ALR1YOL130W 2580 nt8.23□□□□□ -1.09
RPH1P39956 SAN1YDR143C 1833 nt8.22□□□□□ -1.09
RPH1P39956 SRP102YKL154W 735 nt8.22□□□□□ -1.09
RPH1P39956 YMR007WYMR007W 381 nt8.22□□□□□ -1.09
RPH1P39956 RIM2YBR192W 1134 nt8.22□□□□□ -1.09
RPH1P39956 YGR210CYGR210C 1236 nt8.21□□□□□ -1.1
RPH1P39956 CWP2YKL096W-A 279 nt8.21□□□□□ -1.1
RPH1P39956 RCR1YBR005W 642 nt8.21□□□□□ -1.1
RPH1P39956 AGP3YFL055W 1677 nt8.21□□□□□ -1.1
RPH1P39956 ERO1YML130C 1692 nt8.21□□□□□ -1.1
RPH1P39956 TGA1tA(UGC)A 73 nt8.2□□□□□ -1.1
RPH1P39956 tA(UGC)EtA(UGC)E 73 nt8.2□□□□□ -1.1
RPH1P39956 tA(UGC)GtA(UGC)G 73 nt8.2□□□□□ -1.1
RPH1P39956 tA(UGC)LtA(UGC)L 73 nt8.2□□□□□ -1.1
RPH1P39956 tA(UGC)OtA(UGC)O 73 nt8.2□□□□□ -1.1
RPH1P39956 SWM1YDR260C 513 nt8.2□□□□□ -1.1
RPH1P39956 RPC31YNL151C 756 nt8.2□□□□□ -1.1
RPH1P39956 FCY1YPR062W 477 nt8.2□□□□□ -1.1
RPH1P39956 SBP1YHL034C 885 nt8.19□□□□□ -1.1
RPH1P39956 MIM1YOL026C 342 nt8.19□□□□□ -1.1
RPH1P39956 GAS1YMR307W 1680 nt8.18□□□□□ -1.1
RPH1P39956 tD(GUC)BtD(GUC)B 72 nt8.18□□□□□ -1.1
RPH1P39956 tD(GUC)DtD(GUC)D 72 nt8.18□□□□□ -1.1
RPH1P39956 tD(GUC)G1tD(GUC)G1 72 nt8.18□□□□□ -1.1
RPH1P39956 tD(GUC)G2tD(GUC)G2 72 nt8.18□□□□□ -1.1
RPH1P39956 tD(GUC)I1tD(GUC)I1 72 nt8.18□□□□□ -1.1
RPH1P39956 tD(GUC)I2tD(GUC)I2 72 nt8.18□□□□□ -1.1
RPH1P39956 tD(GUC)J1tD(GUC)J1 72 nt8.18□□□□□ -1.1
RPH1P39956 tD(GUC)J2tD(GUC)J2 72 nt8.18□□□□□ -1.1
RPH1P39956 tD(GUC)J3tD(GUC)J3 72 nt8.18□□□□□ -1.1
RPH1P39956 tD(GUC)J4tD(GUC)J4 72 nt8.18□□□□□ -1.1
RPH1P39956 tD(GUC)KtD(GUC)K 72 nt8.18□□□□□ -1.1
RPH1P39956 tD(GUC)L1tD(GUC)L1 72 nt8.18□□□□□ -1.1
RPH1P39956 tD(GUC)L2tD(GUC)L2 72 nt8.18□□□□□ -1.1
RPH1P39956 tD(GUC)MtD(GUC)M 72 nt8.18□□□□□ -1.1
RPH1P39956 tD(GUC)OtD(GUC)O 72 nt8.18□□□□□ -1.1
RPH1P39956 PTC6YCR079W 1329 nt8.18□□□□□ -1.1
RPH1P39956 TOM71YHR117W 1920 nt8.17□□□□□ -1.1
RPH1P39956 RSM7YJR113C 744 nt8.17□□□□□ -1.1
RPH1P39956 YFR020WYFR020W 699 nt8.16□□□□□ -1.1
RPH1P39956 DUS3YLR401C 2007 nt8.12□□□□□ -1.11
RPH1P39956 DPL1YDR294C 1770 nt8.1□□□□□ -1.11
RPH1P39956 DUR3YHL016C 2208 nt8.1□□□□□ -1.11
RPH1P39956 HBS1YKR084C 1836 nt8.09□□□□□ -1.11
RPH1P39956 YLR460CYLR460C 1131 nt8.09□□□□□ -1.11
RPH1P39956 YPL108WYPL108W 507 nt8.09□□□□□ -1.11
RPH1P39956 GGA2YHR108W 1758 nt8.08□□□□□ -1.12
RPH1P39956 RSC4YKR008W 1878 nt8.08□□□□□ -1.12
RPH1P39956 FET5YFL041W 1869 nt8.07□□□□□ -1.12
RPH1P39956 YDR467CYDR467C 327 nt8.07□□□□□ -1.12
RPH1P39956 LSP1YPL004C 1026 nt8.07□□□□□ -1.12
RPH1P39956 POP2YNR052C 1302 nt8.06□□□□□ -1.12
RPH1P39956 GPM1YKL152C 744 nt8.06□□□□□ -1.12
RPH1P39956 FRA1YLL029W 2250 nt8.06□□□□□ -1.12
RPH1P39956 YER152W-AYER152W-A 567 nt8.05□□□□□ -1.12
RPH1P39956 LEU4YNL104C 1860 nt8.04□□□□□ -1.12
RPH1P39956 MET30YIL046W 1923 nt8.04□□□□□ -1.12
RPH1P39956 YMR166CYMR166C 1107 nt8.04□□□□□ -1.12
RPH1P39956 THI3YDL080C 1830 nt8.03□□□□□ -1.12
RPH1P39956 INH1YDL181W 258 nt8.03□□□□□ -1.12
RPH1P39956 CHS7YHR142W 951 nt8.03□□□□□ -1.12
RPH1P39956 YMR316C-BYMR316C-B 309 nt8.02□□□□□ -1.13
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms