Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 PET494YNR045W 1470 nt13.38□□□□□ -0.27
UFD4P33202 COS10YNR075W 1125 nt13.38□□□□□ -0.27
UFD4P33202 SWT21YNL187W 1074 nt13.37□□□□□ -0.27
UFD4P33202 FUS3YBL016W 1062 nt13.35□□□□□ -0.27
UFD4P33202 YMR166CYMR166C 1107 nt13.35□□□□□ -0.27
UFD4P33202 YJL043WYJL043W 774 nt13.34□□□□□ -0.27
UFD4P33202 MFT1YML062C 1179 nt13.33□□□□□ -0.28
UFD4P33202 YOR325WYOR325W 474 nt13.33□□□□□ -0.28
UFD4P33202 SFL1YOR140W 2301 nt13.32□□□□□ -0.28
UFD4P33202 YDL086WYDL086W 822 nt13.29□□□□□ -0.28
UFD4P33202 YKL053WYKL053W 375 nt13.29□□□□□ -0.28
UFD4P33202 YIL100C-AYIL100C-A 339 nt13.26□□□□□ -0.29
UFD4P33202 SRP54YPR088C 1626 nt13.26□□□□□ -0.29
UFD4P33202 MET1YKR069W 1782 nt13.26□□□□□ -0.29
UFD4P33202 CMP2YML057W 1815 nt13.23□□□□□ -0.29
UFD4P33202 CCT2YIL142W 1584 nt13.22□□□□□ -0.29
UFD4P33202 RPR1RPR1 369 nt13.21□□□□□ -0.3
UFD4P33202 RPS6AYPL090C 711 nt13.21□□□□□ -0.3
UFD4P33202 RPS6BYBR181C 711 nt13.21□□□□□ -0.3
UFD4P33202 SPT20YOL148C 1815 nt13.21□□□□□ -0.3
UFD4P33202 YFR020WYFR020W 699 nt13.2□□□□□ -0.3
UFD4P33202 YER156CYER156C 1017 nt13.19□□□□□ -0.3
UFD4P33202 KGD2YDR148C 1392 nt13.19□□□□□ -0.3
UFD4P33202 KEL3YPL263C 1956 nt13.18□□□□□ -0.3
UFD4P33202 YLR046CYLR046C 813 nt13.17□□□□□ -0.3
UFD4P33202 YBL095WYBL095W 813 nt13.17□□□□□ -0.3
UFD4P33202 NUP53YMR153W 1428 nt13.16□□□□□ -0.3
UFD4P33202 OPI10YOL032W 741 nt13.16□□□□□ -0.3
UFD4P33202 ENT4YLL038C 744 nt13.15□□□□□ -0.3
UFD4P33202 RDN25-1RDN25-1 3396 nt13.15□□□□□ -0.3
UFD4P33202 RDN25-2RDN25-2 3396 nt13.15□□□□□ -0.3
UFD4P33202 TDH1YJL052W 999 nt13.14□□□□□ -0.31
UFD4P33202 BXI1YNL305C 894 nt13.12□□□□□ -0.31
UFD4P33202 SUV3YPL029W 2214 nt13.12□□□□□ -0.31
UFD4P33202 ILV3YJR016C 1758 nt13.11□□□□□ -0.31
UFD4P33202 CAK1YFL029C 1107 nt13.1□□□□□ -0.31
UFD4P33202 YLR358CYLR358C 564 nt13.1□□□□□ -0.31
UFD4P33202 ITR2YOL103W 1830 nt13.09□□□□□ -0.31
UFD4P33202 CRC1YOR100C 984 nt13.08□□□□□ -0.32
UFD4P33202 YPT11YNL304W 1254 nt13.07□□□□□ -0.32
UFD4P33202 SAN1YDR143C 1833 nt13.06□□□□□ -0.32
UFD4P33202 SPG1YGR236C 288 nt13.06□□□□□ -0.32
UFD4P33202 MUP1YGR055W 1725 nt13.05□□□□□ -0.32
UFD4P33202 YPR084WYPR084W 1371 nt13.05□□□□□ -0.32
UFD4P33202 RRT14YIL127C 621 nt13.04□□□□□ -0.32
UFD4P33202 YIL168WYIL168W 384 nt13.03□□□□□ -0.32
UFD4P33202 HAP5YOR358W 729 nt13.03□□□□□ -0.32
UFD4P33202 RRT6YGL146C 936 nt13.02□□□□□ -0.33
UFD4P33202 SRY1YKL218C 981 nt13.02□□□□□ -0.33
UFD4P33202 OCH1YGL038C 1443 nt13.02□□□□□ -0.33
UFD4P33202 RSM7YJR113C 744 nt13.01□□□□□ -0.33
UFD4P33202 snR31snR31 225 nt12.99□□□□□ -0.33
UFD4P33202 YMR265CYMR265C 1386 nt12.99□□□□□ -0.33
UFD4P33202 SBP1YHL034C 885 nt12.98□□□□□ -0.33
UFD4P33202 YML079WYML079W 606 nt12.97□□□□□ -0.33
UFD4P33202 HOL1YNR055C 1761 nt12.97□□□□□ -0.33
UFD4P33202 PTC6YCR079W 1329 nt12.97□□□□□ -0.33
UFD4P33202 URA1YKL216W 945 nt12.97□□□□□ -0.33
UFD4P33202 ARO8YGL202W 1503 nt12.97□□□□□ -0.33
UFD4P33202 PUP2YGR253C 783 nt12.95□□□□□ -0.34
UFD4P33202 KES1YPL145C 1305 nt12.94□□□□□ -0.34
UFD4P33202 DLD3YEL071W 1491 nt12.94□□□□□ -0.34
UFD4P33202 COQ8YGL119W 1506 nt12.94□□□□□ -0.34
UFD4P33202 NCA3YJL116C 1014 nt12.92□□□□□ -0.34
UFD4P33202 HAC1YFL031W 717 nt12.91□□□□□ -0.34
UFD4P33202 GAS1YMR307W 1680 nt12.9□□□□□ -0.34
UFD4P33202 GID8YMR135C 1368 nt12.89□□□□□ -0.35
UFD4P33202 MET22YOL064C 1074 nt12.89□□□□□ -0.35
UFD4P33202 YDR476CYDR476C 675 nt12.88□□□□□ -0.35
UFD4P33202 YLR460CYLR460C 1131 nt12.87□□□□□ -0.35
UFD4P33202 MRS6YOR370C 1812 nt12.86□□□□□ -0.35
UFD4P33202 LSR1LSR1 1175 nt12.86□□□□□ -0.35
UFD4P33202 DOC1YGL240W 753 nt12.85□□□□□ -0.35
UFD4P33202 CHS7YHR142W 951 nt12.85□□□□□ -0.35
UFD4P33202 MAS2YHR024C 1449 nt12.83□□□□□ -0.36
UFD4P33202 VMA11YPL234C 495 nt12.83□□□□□ -0.36
UFD4P33202 YHR219WYHR219W 1875 nt12.83□□□□□ -0.36
UFD4P33202 RPN14YGL004C 1254 nt12.82□□□□□ -0.36
UFD4P33202 ATP2YJR121W 1536 nt12.81□□□□□ -0.36
UFD4P33202 YOR111WYOR111W 699 nt12.81□□□□□ -0.36
UFD4P33202 UGP1YKL035W 1500 nt12.81□□□□□ -0.36
UFD4P33202 YHL030W-AYHL030W-A 462 nt12.79□□□□□ -0.36
UFD4P33202 SGA1YIL099W 1650 nt12.78□□□□□ -0.36
UFD4P33202 YJL144WYJL144W 315 nt12.78□□□□□ -0.36
UFD4P33202 YKL133CYKL133C 1392 nt12.77□□□□□ -0.37
UFD4P33202 PDC6YGR087C 1692 nt12.76□□□□□ -0.37
UFD4P33202 YAL019W-AYAL019W-A 570 nt12.76□□□□□ -0.37
UFD4P33202 SLM3YDL033C 1254 nt12.73□□□□□ -0.37
UFD4P33202 YPT31YER031C 672 nt12.73□□□□□ -0.37
UFD4P33202 RNA170RNA170 169 nt12.72□□□□□ -0.37
UFD4P33202 LAT1YNL071W 1449 nt12.72□□□□□ -0.37
UFD4P33202 PIH1YHR034C 1035 nt12.7□□□□□ -0.38
UFD4P33202 SNX3YOR357C 489 nt12.7□□□□□ -0.38
UFD4P33202 RHO1YPR165W 630 nt12.7□□□□□ -0.38
UFD4P33202 PSP2YML017W 1782 nt12.69□□□□□ -0.38
UFD4P33202 SHC1YER096W 1539 nt12.68□□□□□ -0.38
UFD4P33202 HSL7YBR133C 2484 nt12.68□□□□□ -0.38
UFD4P33202 YDR510C-AYDR510C-A 117 nt12.68□□□□□ -0.38
UFD4P33202 OLA1YBR025C 1185 nt12.68□□□□□ -0.38
UFD4P33202 UME1YPL139C 1383 nt12.66□□□□□ -0.38
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms