Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.79■■□□□ 1.4
P04436 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.78■■□□□ 1.4
P04436 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
P04436 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.78■■□□□ 1.4
P04436 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.77■■□□□ 1.4
P04436 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.77■■□□□ 1.4
P04436 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.77■■□□□ 1.4
P04436 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.77■■□□□ 1.4
P04436 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.77■■□□□ 1.4
P04436 AC127502.1-201ENST00000399971 1502 ntBASIC23.77■■□□□ 1.4
P04436 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.76■■□□□ 1.39
P04436 LINC00273-201ENST00000539813 1452 ntBASIC23.76■■□□□ 1.39
P04436 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.76■■□□□ 1.39
P04436 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.76■■□□□ 1.39
P04436 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.76■■□□□ 1.39
P04436 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
P04436 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
P04436 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
P04436 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.75■■□□□ 1.39
P04436 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
P04436 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
P04436 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.74■■□□□ 1.39
P04436 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
P04436 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.73■■□□□ 1.39
P04436 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
P04436 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.72■■□□□ 1.39
P04436 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.72■■□□□ 1.39
P04436 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
P04436 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
P04436 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
P04436 MIR3648-2-201ENST00000581792 180 ntBASIC23.71■■□□□ 1.39
P04436 MIR3648-1-201ENST00000615959 180 ntBASIC23.71■■□□□ 1.39
P04436 ST7-AS1-201ENST00000456775 1889 ntBASIC23.7■■□□□ 1.39
P04436 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
P04436 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
P04436 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
P04436 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
P04436 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
P04436 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
P04436 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.69■■□□□ 1.38
P04436 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
P04436 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.68■■□□□ 1.38
P04436 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
P04436 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
P04436 DUX4L13-201ENST00000554103 1267 ntBASIC23.68■■□□□ 1.38
P04436 AC016575.1-201ENST00000607026 382 ntBASIC23.68■■□□□ 1.38
P04436 DUX4L15-201ENST00000611059 1267 ntBASIC23.68■■□□□ 1.38
P04436 DUX4L23-201ENST00000615195 1269 ntBASIC23.68■■□□□ 1.38
P04436 DUX4L24-201ENST00000617576 1269 ntBASIC23.68■■□□□ 1.38
P04436 DUX4L22-201ENST00000618238 1269 ntBASIC23.68■■□□□ 1.38
P04436 DUX4L20-201ENST00000619712 1269 ntBASIC23.68■■□□□ 1.38
P04436 DUX4L21-201ENST00000622058 1269 ntBASIC23.68■■□□□ 1.38
P04436 DUX4L10-201ENST00000622460 1267 ntBASIC23.68■■□□□ 1.38
P04436 DUX4L25-201ENST00000624915 1269 ntBASIC23.68■■□□□ 1.38
P04436 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
P04436 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.67■■□□□ 1.38
P04436 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.67■■□□□ 1.38
P04436 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
P04436 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
P04436 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
P04436 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
P04436 CR559946.2-201ENST00000623684 991 ntBASIC23.66■■□□□ 1.38
P04436 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
P04436 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
P04436 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
P04436 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
P04436 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
P04436 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
P04436 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
P04436 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
P04436 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.63■■□□□ 1.37
P04436 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
P04436 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
P04436 MIR639-201ENST00000384974 98 ntBASIC23.63■■□□□ 1.37
P04436 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
P04436 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
P04436 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.62■■□□□ 1.37
P04436 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.62■■□□□ 1.37
P04436 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
P04436 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
P04436 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
P04436 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
P04436 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
P04436 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.61■■□□□ 1.37
P04436 AC135983.2-203ENST00000454486 1613 ntBASIC23.6■■□□□ 1.37
P04436 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.6■■□□□ 1.37
P04436 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
P04436 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
P04436 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.59■■□□□ 1.37
P04436 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.59■■□□□ 1.37
P04436 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
P04436 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
P04436 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.59■■□□□ 1.37
P04436 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.59■■□□□ 1.37
P04436 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
P04436 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
P04436 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.58■■□□□ 1.37
P04436 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
P04436 WHAMMP2-203ENST00000563942 1603 ntBASIC23.57■■□□□ 1.36
P04436 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms