Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNAI2O43623 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.1■□□□□ 0.65
SNAI2O43623 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNAI2O43623 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNAI2O43623 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SNAI2O43623 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
SNAI2O43623 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.09■□□□□ 0.65
SNAI2O43623 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.09■□□□□ 0.65
SNAI2O43623 AP002365.1-201ENST00000603448 772 ntBASIC19.09■□□□□ 0.65
SNAI2O43623 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNAI2O43623 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNAI2O43623 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNAI2O43623 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNAI2O43623 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SNAI2O43623 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNAI2O43623 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNAI2O43623 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SNAI2O43623 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.08■□□□□ 0.64
SNAI2O43623 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNAI2O43623 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNAI2O43623 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNAI2O43623 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNAI2O43623 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNAI2O43623 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNAI2O43623 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.07■□□□□ 0.64
SNAI2O43623 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNAI2O43623 AL121749.1-202ENST00000609313 2153 ntBASIC19.07■□□□□ 0.64
SNAI2O43623 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNAI2O43623 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNAI2O43623 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SNAI2O43623 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SNAI2O43623 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNAI2O43623 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.06■□□□□ 0.64
SNAI2O43623 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNAI2O43623 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.06■□□□□ 0.64
SNAI2O43623 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNAI2O43623 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNAI2O43623 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.05■□□□□ 0.64
SNAI2O43623 AC010864.1-201ENST00000609407 1511 ntBASIC19.05■□□□□ 0.64
SNAI2O43623 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNAI2O43623 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
SNAI2O43623 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNAI2O43623 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SNAI2O43623 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNAI2O43623 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.04■□□□□ 0.64
SNAI2O43623 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.04■□□□□ 0.64
SNAI2O43623 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNAI2O43623 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNAI2O43623 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.02■□□□□ 0.64
SNAI2O43623 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNAI2O43623 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNAI2O43623 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SNAI2O43623 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNAI2O43623 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNAI2O43623 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19■□□□□ 0.63
SNAI2O43623 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNAI2O43623 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNAI2O43623 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SNAI2O43623 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SNAI2O43623 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SNAI2O43623 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNAI2O43623 AL133380.1-201ENST00000506013 324 ntBASIC18.98■□□□□ 0.63
SNAI2O43623 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.98■□□□□ 0.63
SNAI2O43623 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.98■□□□□ 0.63
SNAI2O43623 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.98■□□□□ 0.63
SNAI2O43623 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SNAI2O43623 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAI2O43623 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAI2O43623 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SNAI2O43623 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.97■□□□□ 0.63
SNAI2O43623 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNAI2O43623 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SNAI2O43623 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SNAI2O43623 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SNAI2O43623 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNAI2O43623 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.97■□□□□ 0.63
SNAI2O43623 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SNAI2O43623 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNAI2O43623 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNAI2O43623 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNAI2O43623 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SNAI2O43623 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SNAI2O43623 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNAI2O43623 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNAI2O43623 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SNAI2O43623 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNAI2O43623 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SNAI2O43623 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNAI2O43623 BX255925.1-201ENST00000566954 1854 ntBASIC18.94■□□□□ 0.62
SNAI2O43623 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNAI2O43623 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SNAI2O43623 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SNAI2O43623 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNAI2O43623 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNAI2O43623 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNAI2O43623 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNAI2O43623 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNAI2O43623 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNAI2O43623 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNAI2O43623 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms