Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TNFRSF11BO00300 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TNFRSF11BO00300 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TNFRSF11BO00300 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TNFRSF11BO00300 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
TNFRSF11BO00300 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
TNFRSF11BO00300 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.89■■□□□ 1.41
TNFRSF11BO00300 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.88■■□□□ 1.41
TNFRSF11BO00300 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.88■■□□□ 1.41
TNFRSF11BO00300 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TNFRSF11BO00300 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TNFRSF11BO00300 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
TNFRSF11BO00300 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TNFRSF11BO00300 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TNFRSF11BO00300 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.86■■□□□ 1.41
TNFRSF11BO00300 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
TNFRSF11BO00300 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
TNFRSF11BO00300 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
TNFRSF11BO00300 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TNFRSF11BO00300 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TNFRSF11BO00300 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
TNFRSF11BO00300 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TNFRSF11BO00300 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TNFRSF11BO00300 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
TNFRSF11BO00300 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.83■■□□□ 1.41
TNFRSF11BO00300 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TNFRSF11BO00300 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TNFRSF11BO00300 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.83■■□□□ 1.4
TNFRSF11BO00300 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.82■■□□□ 1.4
TNFRSF11BO00300 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TNFRSF11BO00300 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TNFRSF11BO00300 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.82■■□□□ 1.4
TNFRSF11BO00300 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TNFRSF11BO00300 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TNFRSF11BO00300 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.81■■□□□ 1.4
TNFRSF11BO00300 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TNFRSF11BO00300 BX255925.1-201ENST00000566954 1854 ntBASIC23.81■■□□□ 1.4
TNFRSF11BO00300 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TNFRSF11BO00300 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.8■■□□□ 1.4
TNFRSF11BO00300 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
TNFRSF11BO00300 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
TNFRSF11BO00300 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.79■■□□□ 1.4
TNFRSF11BO00300 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.79■■□□□ 1.4
TNFRSF11BO00300 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TNFRSF11BO00300 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TNFRSF11BO00300 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.79■■□□□ 1.4
TNFRSF11BO00300 AP004833.2-201ENST00000532228 1454 ntBASIC23.78■■□□□ 1.4
TNFRSF11BO00300 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.78■■□□□ 1.4
TNFRSF11BO00300 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNFRSF11BO00300 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNFRSF11BO00300 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
TNFRSF11BO00300 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TNFRSF11BO00300 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TNFRSF11BO00300 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TNFRSF11BO00300 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TNFRSF11BO00300 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNFRSF11BO00300 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TNFRSF11BO00300 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNFRSF11BO00300 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNFRSF11BO00300 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNFRSF11BO00300 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.74■■□□□ 1.39
TNFRSF11BO00300 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNFRSF11BO00300 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNFRSF11BO00300 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TNFRSF11BO00300 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TNFRSF11BO00300 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TNFRSF11BO00300 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.73■■□□□ 1.39
TNFRSF11BO00300 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.72■■□□□ 1.39
TNFRSF11BO00300 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TNFRSF11BO00300 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TNFRSF11BO00300 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TNFRSF11BO00300 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TNFRSF11BO00300 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TNFRSF11BO00300 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
TNFRSF11BO00300 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TNFRSF11BO00300 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
TNFRSF11BO00300 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TNFRSF11BO00300 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.71■■□□□ 1.39
TNFRSF11BO00300 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TNFRSF11BO00300 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TNFRSF11BO00300 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TNFRSF11BO00300 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.71■■□□□ 1.39
TNFRSF11BO00300 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.7■■□□□ 1.39
TNFRSF11BO00300 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
TNFRSF11BO00300 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TNFRSF11BO00300 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TNFRSF11BO00300 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.69■■□□□ 1.38
TNFRSF11BO00300 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TNFRSF11BO00300 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.69■■□□□ 1.38
TNFRSF11BO00300 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TNFRSF11BO00300 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TNFRSF11BO00300 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
TNFRSF11BO00300 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.68■■□□□ 1.38
TNFRSF11BO00300 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TNFRSF11BO00300 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TNFRSF11BO00300 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.68■■□□□ 1.38
TNFRSF11BO00300 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
TNFRSF11BO00300 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
TNFRSF11BO00300 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TNFRSF11BO00300 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms