Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC189A1A4V9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.67■■□□□ 1.7
CCDC189A1A4V9 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
CCDC189A1A4V9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC189A1A4V9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
CCDC189A1A4V9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC189A1A4V9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.67■■□□□ 1.7
CCDC189A1A4V9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC189A1A4V9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC189A1A4V9 AC136428.2-201ENST00000563187 214 ntBASIC25.66■■□□□ 1.7
CCDC189A1A4V9 CAHM-201ENST00000604200 896 ntBASIC25.66■■□□□ 1.7
CCDC189A1A4V9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC189A1A4V9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC189A1A4V9 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC189A1A4V9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC189A1A4V9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC189A1A4V9 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.65■■□□□ 1.7
CCDC189A1A4V9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC189A1A4V9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
CCDC189A1A4V9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.64■■□□□ 1.7
CCDC189A1A4V9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC189A1A4V9 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC189A1A4V9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC189A1A4V9 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC189A1A4V9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
CCDC189A1A4V9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.62■■□□□ 1.69
CCDC189A1A4V9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC189A1A4V9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.62■■□□□ 1.69
CCDC189A1A4V9 AC097358.2-201ENST00000607541 1159 ntBASIC25.62■■□□□ 1.69
CCDC189A1A4V9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC189A1A4V9 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC189A1A4V9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC189A1A4V9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC189A1A4V9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCDC189A1A4V9 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
CCDC189A1A4V9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CCDC189A1A4V9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CCDC189A1A4V9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCDC189A1A4V9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.6■■□□□ 1.69
CCDC189A1A4V9 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC189A1A4V9 AP004833.2-201ENST00000532228 1454 ntBASIC25.59■■□□□ 1.69
CCDC189A1A4V9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC189A1A4V9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC189A1A4V9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.57■■□□□ 1.68
CCDC189A1A4V9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.57■■□□□ 1.68
CCDC189A1A4V9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC189A1A4V9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.57■■□□□ 1.68
CCDC189A1A4V9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC189A1A4V9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC189A1A4V9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC189A1A4V9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.56■■□□□ 1.68
CCDC189A1A4V9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.56■■□□□ 1.68
CCDC189A1A4V9 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.56■■□□□ 1.68
CCDC189A1A4V9 AC142086.6-201ENST00000621154 1765 ntBASIC25.56■■□□□ 1.68
CCDC189A1A4V9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.56■■□□□ 1.68
CCDC189A1A4V9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC189A1A4V9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC189A1A4V9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC189A1A4V9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC189A1A4V9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
CCDC189A1A4V9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC189A1A4V9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC189A1A4V9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC189A1A4V9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC189A1A4V9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC189A1A4V9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCDC189A1A4V9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
CCDC189A1A4V9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCDC189A1A4V9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CCDC189A1A4V9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC189A1A4V9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC189A1A4V9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC189A1A4V9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.51■■□□□ 1.67
CCDC189A1A4V9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.51■■□□□ 1.67
CCDC189A1A4V9 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC189A1A4V9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC25.51■■□□□ 1.67
CCDC189A1A4V9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC189A1A4V9 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
CCDC189A1A4V9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
CCDC189A1A4V9 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
CCDC189A1A4V9 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC189A1A4V9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC189A1A4V9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC189A1A4V9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC189A1A4V9 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC189A1A4V9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.47■■□□□ 1.67
CCDC189A1A4V9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC189A1A4V9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.47■■□□□ 1.67
CCDC189A1A4V9 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC189A1A4V9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.45■■□□□ 1.67
CCDC189A1A4V9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
CCDC189A1A4V9 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.66
CCDC189A1A4V9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.45■■□□□ 1.66
CCDC189A1A4V9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
CCDC189A1A4V9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.44■■□□□ 1.66
CCDC189A1A4V9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.44■■□□□ 1.66
CCDC189A1A4V9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.44■■□□□ 1.66
CCDC189A1A4V9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.44■■□□□ 1.66
CCDC189A1A4V9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC189A1A4V9 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms