Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV3A0A0B4J244 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV3A0A0B4J244 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
TRAV3A0A0B4J244 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV3A0A0B4J244 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV3A0A0B4J244 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV3A0A0B4J244 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.85■□□□□ 0.93
TRAV3A0A0B4J244 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAV3A0A0B4J244 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.83■□□□□ 0.93
TRAV3A0A0B4J244 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
TRAV3A0A0B4J244 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.82■□□□□ 0.92
TRAV3A0A0B4J244 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV3A0A0B4J244 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV3A0A0B4J244 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV3A0A0B4J244 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV3A0A0B4J244 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV3A0A0B4J244 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TRAV3A0A0B4J244 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV3A0A0B4J244 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.81■□□□□ 0.92
TRAV3A0A0B4J244 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV3A0A0B4J244 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TRAV3A0A0B4J244 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV3A0A0B4J244 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV3A0A0B4J244 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV3A0A0B4J244 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV3A0A0B4J244 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.8■□□□□ 0.92
TRAV3A0A0B4J244 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV3A0A0B4J244 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV3A0A0B4J244 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV3A0A0B4J244 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TRAV3A0A0B4J244 AC127502.1-201ENST00000399971 1502 ntBASIC20.78■□□□□ 0.92
TRAV3A0A0B4J244 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV3A0A0B4J244 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRAV3A0A0B4J244 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV3A0A0B4J244 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV3A0A0B4J244 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
TRAV3A0A0B4J244 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TRAV3A0A0B4J244 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.76■□□□□ 0.91
TRAV3A0A0B4J244 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV3A0A0B4J244 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV3A0A0B4J244 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV3A0A0B4J244 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
TRAV3A0A0B4J244 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.75■□□□□ 0.91
TRAV3A0A0B4J244 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV3A0A0B4J244 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV3A0A0B4J244 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.74■□□□□ 0.91
TRAV3A0A0B4J244 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV3A0A0B4J244 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV3A0A0B4J244 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.73■□□□□ 0.91
TRAV3A0A0B4J244 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TRAV3A0A0B4J244 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV3A0A0B4J244 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV3A0A0B4J244 AP004833.2-201ENST00000532228 1454 ntBASIC20.71■□□□□ 0.91
TRAV3A0A0B4J244 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.71■□□□□ 0.91
TRAV3A0A0B4J244 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TRAV3A0A0B4J244 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV3A0A0B4J244 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV3A0A0B4J244 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.91
TRAV3A0A0B4J244 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.7■□□□□ 0.9
TRAV3A0A0B4J244 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TRAV3A0A0B4J244 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV3A0A0B4J244 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV3A0A0B4J244 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAV3A0A0B4J244 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV3A0A0B4J244 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TRAV3A0A0B4J244 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.69■□□□□ 0.9
TRAV3A0A0B4J244 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV3A0A0B4J244 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAV3A0A0B4J244 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV3A0A0B4J244 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV3A0A0B4J244 MIR762-201ENST00000390236 83 ntBASIC20.68■□□□□ 0.9
TRAV3A0A0B4J244 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TRAV3A0A0B4J244 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
TRAV3A0A0B4J244 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV3A0A0B4J244 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV3A0A0B4J244 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.67■□□□□ 0.9
TRAV3A0A0B4J244 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV3A0A0B4J244 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV3A0A0B4J244 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV3A0A0B4J244 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV3A0A0B4J244 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRAV3A0A0B4J244 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV3A0A0B4J244 AL121749.1-202ENST00000609313 2153 ntBASIC20.66■□□□□ 0.9
TRAV3A0A0B4J244 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV3A0A0B4J244 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.65■□□□□ 0.9
TRAV3A0A0B4J244 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.65■□□□□ 0.9
TRAV3A0A0B4J244 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV3A0A0B4J244 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRAV3A0A0B4J244 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV3A0A0B4J244 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV3A0A0B4J244 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV3A0A0B4J244 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
TRAV3A0A0B4J244 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV3A0A0B4J244 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.63■□□□□ 0.89
TRAV3A0A0B4J244 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.63■□□□□ 0.89
TRAV3A0A0B4J244 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRAV3A0A0B4J244 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV3A0A0B4J244 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.62■□□□□ 0.89
TRAV3A0A0B4J244 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.62■□□□□ 0.89
TRAV3A0A0B4J244 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms