Protein–RNA interactions for Protein: Q03691

ROT1, Protein ROT1, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ROT1Q03691 PDR8YLR266C 2106 nt1.69□□□□□ -2.14
ROT1Q03691 snR14snR14 160 nt1.69□□□□□ -2.14
ROT1Q03691 snR190snR190 190 nt1.69□□□□□ -2.14
ROT1Q03691 RPL26BYGR034W 384 nt1.68□□□□□ -2.14
ROT1Q03691 SAC3YDR159W 3906 nt1.68□□□□□ -2.14
ROT1Q03691 CFT1YDR301W 4074 nt1.66□□□□□ -2.14
ROT1Q03691 SMC4YLR086W 4257 nt1.66□□□□□ -2.14
ROT1Q03691 ANS1YHR126C 480 nt1.66□□□□□ -2.14
ROT1Q03691 SET3YKR029C 2256 nt1.65□□□□□ -2.14
ROT1Q03691 STO1YMR125W 2586 nt1.65□□□□□ -2.15
ROT1Q03691 YLR419WYLR419W 4308 nt1.65□□□□□ -2.15
ROT1Q03691 ASE1YOR058C 2658 nt1.64□□□□□ -2.15
ROT1Q03691 USO1YDL058W 5373 nt1.64□□□□□ -2.15
ROT1Q03691 YDL073WYDL073W 2955 nt1.64□□□□□ -2.15
ROT1Q03691 CHS1YNL192W 3396 nt1.64□□□□□ -2.15
ROT1Q03691 YHR214C-BYHR214C-B 5382 nt1.63□□□□□ -2.15
ROT1Q03691 YOL083C-AYOL083C-A 141 nt1.63□□□□□ -2.15
ROT1Q03691 SEC3YER008C 4011 nt1.63□□□□□ -2.15
ROT1Q03691 WAR1YML076C 2835 nt1.62□□□□□ -2.15
ROT1Q03691 IRC20YLR247C 4671 nt1.62□□□□□ -2.15
ROT1Q03691 BRR2YER172C 6492 nt1.61□□□□□ -2.15
ROT1Q03691 YBL071C-BYBL071C-B 99 nt1.61□□□□□ -2.15
ROT1Q03691 YOR093CYOR093C 4947 nt1.59□□□□□ -2.15
ROT1Q03691 SWI4YER111C 3282 nt1.58□□□□□ -2.16
ROT1Q03691 YBR196C-AYBR196C-A 150 nt1.57□□□□□ -2.16
ROT1Q03691 NUP192YJL039C 5052 nt1.56□□□□□ -2.16
ROT1Q03691 APL3YBL037W 3078 nt1.55□□□□□ -2.16
ROT1Q03691 SEC8YPR055W 3198 nt1.55□□□□□ -2.16
ROT1Q03691 RPS26AYGL189C 360 nt1.55□□□□□ -2.16
ROT1Q03691 TMA7YLR262C-A 195 nt1.54□□□□□ -2.16
ROT1Q03691 YBL100W-CYBL100W-C 120 nt1.54□□□□□ -2.16
ROT1Q03691 NUP145YGL092W 3954 nt1.54□□□□□ -2.16
ROT1Q03691 YDR034C-AYDR034C-A 177 nt1.53□□□□□ -2.16
ROT1Q03691 YBR200W-AYBR200W-A 165 nt1.53□□□□□ -2.16
ROT1Q03691 CLU1YMR012W 3834 nt1.52□□□□□ -2.17
ROT1Q03691 GEA2YEL022W 4380 nt1.52□□□□□ -2.17
ROT1Q03691 CAT8YMR280C 4302 nt1.51□□□□□ -2.17
ROT1Q03691 TRM732YMR259C 4263 nt1.51□□□□□ -2.17
ROT1Q03691 DNF3YMR162C 4971 nt1.5□□□□□ -2.17
ROT1Q03691 SEC10YLR166C 2616 nt1.5□□□□□ -2.17
ROT1Q03691 YLR399W-AYLR399W-A 105 nt1.5□□□□□ -2.17
ROT1Q03691 YOL164W-AYOL164W-A 183 nt1.5□□□□□ -2.17
ROT1Q03691 AZF1YOR113W 2745 nt1.5□□□□□ -2.17
ROT1Q03691 MON2YNL297C 4911 nt1.5□□□□□ -2.17
ROT1Q03691 NNF2YGR089W 2811 nt1.49□□□□□ -2.17
ROT1Q03691 BEM3YPL115C 3387 nt1.49□□□□□ -2.17
ROT1Q03691 PRP16YKR086W 3216 nt1.49□□□□□ -2.17
ROT1Q03691 YGR240C-AYGR240C-A 201 nt1.48□□□□□ -2.17
ROT1Q03691 BPH1YCR032W 6504 nt1.48□□□□□ -2.17
ROT1Q03691 YSP1YHR155W 3687 nt1.47□□□□□ -2.17
ROT1Q03691 tT(UGU)HtT(UGU)H 72 nt1.47□□□□□ -2.17
ROT1Q03691 YMR247W-AYMR247W-A 144 nt1.47□□□□□ -2.17
ROT1Q03691 BST1YFL025C 3090 nt1.46□□□□□ -2.18
ROT1Q03691 YPR160W-AYPR160W-A 81 nt1.46□□□□□ -2.18
ROT1Q03691 MSN5YDR335W 3675 nt1.46□□□□□ -2.18
ROT1Q03691 UBP3YER151C 2739 nt1.46□□□□□ -2.18
ROT1Q03691 tN(GUU)QtN(GUU)Q 71 nt1.45□□□□□ -2.18
ROT1Q03691 PKH3YDR466W 2697 nt1.45□□□□□ -2.18
ROT1Q03691 ULP2YIL031W 3105 nt1.45□□□□□ -2.18
ROT1Q03691 GLG1YKR058W 1851 nt1.43□□□□□ -2.18
ROT1Q03691 YLR286W-AYLR286W-A 135 nt1.43□□□□□ -2.18
ROT1Q03691 MEC1YBR136W 7107 nt1.43□□□□□ -2.18
ROT1Q03691 NUP188YML103C 4968 nt1.42□□□□□ -2.18
ROT1Q03691 YMR045CYMR045C 5268 nt1.42□□□□□ -2.18
ROT1Q03691 PIK1YNL267W 3201 nt1.42□□□□□ -2.18
ROT1Q03691 PMD1YER132C 5262 nt1.4□□□□□ -2.19
ROT1Q03691 EST2YLR318W 2655 nt1.4□□□□□ -2.19
ROT1Q03691 CDC39YCR093W 6327 nt1.39□□□□□ -2.19
ROT1Q03691 MSH3YCR092C 3057 nt1.38□□□□□ -2.19
ROT1Q03691 YPL060C-AYPL060C-A 3315 nt1.38□□□□□ -2.19
ROT1Q03691 tD(GUC)QtD(GUC)Q 75 nt1.36□□□□□ -2.19
ROT1Q03691 snR47snR47 99 nt1.36□□□□□ -2.19
ROT1Q03691 IRA1YBR140C 9279 nt1.35□□□□□ -2.19
ROT1Q03691 snR53snR53 91 nt1.35□□□□□ -2.19
ROT1Q03691 ORC3YLL004W 1851 nt1.34□□□□□ -2.19
ROT1Q03691 NST1YNL091W 3723 nt1.3□□□□□ -2.2
ROT1Q03691 tH(GUG)E1tH(GUG)E1 72 nt1.3□□□□□ -2.2
ROT1Q03691 tH(GUG)E2tH(GUG)E2 72 nt1.3□□□□□ -2.2
ROT1Q03691 tH(GUG)G1tH(GUG)G1 72 nt1.3□□□□□ -2.2
ROT1Q03691 tH(GUG)G2tH(GUG)G2 72 nt1.3□□□□□ -2.2
ROT1Q03691 tH(GUG)HtH(GUG)H 72 nt1.3□□□□□ -2.2
ROT1Q03691 tH(GUG)KtH(GUG)K 72 nt1.3□□□□□ -2.2
ROT1Q03691 tH(GUG)MtH(GUG)M 72 nt1.3□□□□□ -2.2
ROT1Q03691 tQ(UUG)E2tQ(UUG)E2 72 nt1.3□□□□□ -2.2
ROT1Q03691 LAA1YJL207C 6045 nt1.3□□□□□ -2.2
ROT1Q03691 EST1YLR233C 2100 nt1.3□□□□□ -2.2
ROT1Q03691 SPC110YDR356W 2835 nt1.3□□□□□ -2.2
ROT1Q03691 CCH1YGR217W 6120 nt1.29□□□□□ -2.2
ROT1Q03691 snR69snR69 101 nt1.29□□□□□ -2.2
ROT1Q03691 YLR299C-AYLR299C-A 93 nt1.29□□□□□ -2.2
ROT1Q03691 VPS15YBR097W 4365 nt1.29□□□□□ -2.2
ROT1Q03691 SXM1YDR395W 2835 nt1.28□□□□□ -2.2
ROT1Q03691 snR64snR64 101 nt1.28□□□□□ -2.2
ROT1Q03691 CSE1YGL238W 2883 nt1.28□□□□□ -2.2
ROT1Q03691 YGR130CYGR130C 2451 nt1.27□□□□□ -2.21
ROT1Q03691 YDL159C-BYDL159C-B 177 nt1.25□□□□□ -2.21
ROT1Q03691 SSK2YNR031C 4740 nt1.25□□□□□ -2.21
ROT1Q03691 PET127YOR017W 2403 nt1.24□□□□□ -2.21
ROT1Q03691 RDS3YPR094W 324 nt1.24□□□□□ -2.21
ROT1Q03691 HUG1YML058W-A 207 nt1.23□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 22.5 ms