Protein–RNA interactions for Protein: P53617

NRD1, Protein NRD1, yeastyeast

Known RBP RIP-Chip data

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NRD1P53617 SEY1YOR165W 2331 nt2.07□□□□□ -2.08
NRD1P53617 FAR11YNL127W 2862 nt2.07□□□□□ -2.08
NRD1P53617 UBR1YGR184C 5853 nt2.06□□□□□ -2.08
NRD1P53617 ALY2YJL084C 3141 nt2.06□□□□□ -2.08
NRD1P53617 PKH3YDR466W 2697 nt2.06□□□□□ -2.08 RIP-Chip
NRD1P53617 SIR4YDR227W 4077 nt2.06□□□□□ -2.08
NRD1P53617 STH1YIL126W 4080 nt2.06□□□□□ -2.08
NRD1P53617 KOG1YHR186C 4674 nt2.05□□□□□ -2.08
NRD1P53617 CHS1YNL192W 3396 nt2.05□□□□□ -2.08
NRD1P53617 GYP5YPL249C 2685 nt2.04□□□□□ -2.08
NRD1P53617 SPP41YDR464W 4308 nt2.03□□□□□ -2.08
NRD1P53617 FKS1YLR342W 5631 nt2.03□□□□□ -2.08
NRD1P53617 RDS3YPR094W 324 nt2.03□□□□□ -2.08 RIP-Chip
NRD1P53617 BUL2YML111W 2763 nt2.03□□□□□ -2.09
NRD1P53617 TRL1YJL087C 2484 nt2.02□□□□□ -2.09
NRD1P53617 SAC3YDR159W 3906 nt2.02□□□□□ -2.09
NRD1P53617 RAV1YJR033C 4074 nt2.01□□□□□ -2.09
NRD1P53617 NUP100YKL068W 2880 nt2□□□□□ -2.09
NRD1P53617 YHR180W-AYHR180W-A 183 nt2□□□□□ -2.09
NRD1P53617 snR14snR14 160 nt2□□□□□ -2.09
NRD1P53617 KRE33YNL132W 3171 nt2□□□□□ -2.09
NRD1P53617 SEC31YDL195W 3822 nt1.99□□□□□ -2.09
NRD1P53617 GIP3YPL137C 3831 nt1.99□□□□□ -2.09
NRD1P53617 CSF1YLR087C 8877 nt1.99□□□□□ -2.09
NRD1P53617 UBP2YOR124C 3819 nt1.96□□□□□ -2.1
NRD1P53617 YLR419WYLR419W 4308 nt1.96□□□□□ -2.1 RIP-Chip
NRD1P53617 snR69snR69 101 nt1.96□□□□□ -2.1
NRD1P53617 BUD2YKL092C 3315 nt1.96□□□□□ -2.1
NRD1P53617 YHR214C-BYHR214C-B 5382 nt1.96□□□□□ -2.1
NRD1P53617 MET18YIL128W 3099 nt1.95□□□□□ -2.1
NRD1P53617 STO1YMR125W 2586 nt1.95□□□□□ -2.1
NRD1P53617 YPR160W-AYPR160W-A 81 nt1.95□□□□□ -2.1
NRD1P53617 snR190snR190 190 nt1.94□□□□□ -2.1
NRD1P53617 YOR343W-BYOR343W-B 5313 nt1.92□□□□□ -2.1
NRD1P53617 NEO1YIL048W 3456 nt1.92□□□□□ -2.1
NRD1P53617 YDL114W-AYDL114W-A 114 nt1.92□□□□□ -2.1 RIP-Chip
NRD1P53617 CHC1YGL206C 4962 nt1.92□□□□□ -2.1
NRD1P53617 RTT101YJL047C 2529 nt1.91□□□□□ -2.1
NRD1P53617 MYO2YOR326W 4725 nt1.91□□□□□ -2.1
NRD1P53617 VPS8YAL002W 3825 nt1.9□□□□□ -2.1
NRD1P53617 TRM3YDL112W 4311 nt1.9□□□□□ -2.11
NRD1P53617 SEC8YPR055W 3198 nt1.9□□□□□ -2.11
NRD1P53617 tV(UAC)QtV(UAC)Q 76 nt1.89□□□□□ -2.11
NRD1P53617 YMR272W-BYMR272W-B 108 nt1.89□□□□□ -2.11
NRD1P53617 BPH1YCR032W 6504 nt1.89□□□□□ -2.11
NRD1P53617 YMR045CYMR045C 5268 nt1.88□□□□□ -2.11
NRD1P53617 FAB1YFR019W 6837 nt1.87□□□□□ -2.11
NRD1P53617 CSE1YGL238W 2883 nt1.86□□□□□ -2.11
NRD1P53617 USO1YDL058W 5373 nt1.86□□□□□ -2.11
NRD1P53617 UBR2YLR024C 5619 nt1.86□□□□□ -2.11
NRD1P53617 NST1YNL091W 3723 nt1.86□□□□□ -2.11
NRD1P53617 GCN2YDR283C 4980 nt1.85□□□□□ -2.11
NRD1P53617 YAR009CYAR009C 3591 nt1.84□□□□□ -2.11
NRD1P53617 PAN2YGL094C 3348 nt1.84□□□□□ -2.12
NRD1P53617 PEP1YBL017C 4740 nt1.83□□□□□ -2.12
NRD1P53617 YPL060C-AYPL060C-A 3315 nt1.83□□□□□ -2.12
NRD1P53617 SYH1YPL105C 2550 nt1.82□□□□□ -2.12
NRD1P53617 ULP2YIL031W 3105 nt1.81□□□□□ -2.12
NRD1P53617 SXM1YDR395W 2835 nt1.81□□□□□ -2.12 RIP-Chip
NRD1P53617 CTR9YOL145C 3234 nt1.8□□□□□ -2.12
NRD1P53617 IRC20YLR247C 4671 nt1.78□□□□□ -2.13
NRD1P53617 NUT1YGL151W 3399 nt1.77□□□□□ -2.13
NRD1P53617 HIR3YJR140C 4947 nt1.77□□□□□ -2.13
NRD1P53617 PAU12YGR294W 363 nt1.77□□□□□ -2.13
NRD1P53617 tN(GUU)QtN(GUU)Q 71 nt1.76□□□□□ -2.13
NRD1P53617 YMR160WYMR160W 2451 nt1.76□□□□□ -2.13
NRD1P53617 KIP1YBL063W 3336 nt1.75□□□□□ -2.13
NRD1P53617 PET309YLR067C 2898 nt1.75□□□□□ -2.13
NRD1P53617 TUS1YLR425W 3924 nt1.74□□□□□ -2.13
NRD1P53617 IRE1YHR079C 3348 nt1.73□□□□□ -2.13
NRD1P53617 CFT1YDR301W 4074 nt1.72□□□□□ -2.13
NRD1P53617 YOR093CYOR093C 4947 nt1.72□□□□□ -2.13
NRD1P53617 DNF3YMR162C 4971 nt1.71□□□□□ -2.13
NRD1P53617 MYO1YHR023W 5787 nt1.71□□□□□ -2.14
NRD1P53617 ROM2YLR371W 4071 nt1.71□□□□□ -2.14
NRD1P53617 GEA2YEL022W 4380 nt1.71□□□□□ -2.14
NRD1P53617 MYO4YAL029C 4416 nt1.71□□□□□ -2.14
NRD1P53617 SEC3YER008C 4011 nt1.71□□□□□ -2.14
NRD1P53617 PRP16YKR086W 3216 nt1.7□□□□□ -2.14
NRD1P53617 MSH3YCR092C 3057 nt1.7□□□□□ -2.14
NRD1P53617 YMR247W-AYMR247W-A 144 nt1.7□□□□□ -2.14
NRD1P53617 RAD50YNL250W 3939 nt1.7□□□□□ -2.14
NRD1P53617 YNL054W-BYNL054W-B 5250 nt1.69□□□□□ -2.14
NRD1P53617 HUG1YML058W-A 207 nt1.69□□□□□ -2.14
NRD1P53617 REV3YPL167C 4515 nt1.68□□□□□ -2.14
NRD1P53617 HER1YOR227W 3741 nt1.68□□□□□ -2.14
NRD1P53617 MSH6YDR097C 3729 nt1.68□□□□□ -2.14
NRD1P53617 tQ(UUG)QtQ(UUG)Q 76 nt1.67□□□□□ -2.14
NRD1P53617 YJL077W-AYJL077W-A 87 nt1.66□□□□□ -2.14
NRD1P53617 ATG9YDL149W 2994 nt1.66□□□□□ -2.14
NRD1P53617 UTP21YLR409C 2820 nt1.64□□□□□ -2.15
NRD1P53617 YSP1YHR155W 3687 nt1.64□□□□□ -2.15
NRD1P53617 YKL106C-AYKL106C-A 120 nt1.64□□□□□ -2.15
NRD1P53617 tT(UGU)HtT(UGU)H 72 nt1.63□□□□□ -2.15
NRD1P53617 MEC1YBR136W 7107 nt1.62□□□□□ -2.15
NRD1P53617 TDA9YML081W 3756 nt1.61□□□□□ -2.15
NRD1P53617 YER090C-AYER090C-A 90 nt1.61□□□□□ -2.15
NRD1P53617 KAP122YGL016W 3246 nt1.61□□□□□ -2.15
NRD1P53617 FYV8YGR196C 2454 nt1.59□□□□□ -2.16
NRD1P53617 SMC4YLR086W 4257 nt1.57□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 33.7 ms