Protein–RNA interactions for Protein: P38249

RPG1, Eukaryotic translation initiation factor 3 subunit A, yeastyeast

Known RBP Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPG1P38249 PRP8YHR165C 7242 nt3.31□□□□□ -1.88
RPG1P38249 DRS2YAL026C 4068 nt3.31□□□□□ -1.88
RPG1P38249 UBR1YGR184C 5853 nt3.3□□□□□ -1.88
RPG1P38249 STH1YIL126W 4080 nt3.3□□□□□ -1.88
RPG1P38249 YOR343W-BYOR343W-B 5313 nt3.29□□□□□ -1.88
RPG1P38249 tN(GUU)QtN(GUU)Q 71 nt3.29□□□□□ -1.88
RPG1P38249 IRC20YLR247C 4671 nt3.29□□□□□ -1.88
RPG1P38249 MSN5YDR335W 3675 nt3.27□□□□□ -1.89
RPG1P38249 SRB8YCR081W 4284 nt3.27□□□□□ -1.89
RPG1P38249 TAO3YIL129C 7131 nt3.26□□□□□ -1.89
RPG1P38249 YLR399W-AYLR399W-A 105 nt3.26□□□□□ -1.89
RPG1P38249 UTP22YGR090W 3714 nt3.24□□□□□ -1.89
RPG1P38249 MOT1YPL082C 5604 nt3.24□□□□□ -1.89
RPG1P38249 CHC1YGL206C 4962 nt3.24□□□□□ -1.89
RPG1P38249 SLH1YGR271W 5904 nt3.24□□□□□ -1.89
RPG1P38249 GIP3YPL137C 3831 nt3.24□□□□□ -1.89
RPG1P38249 MSH3YCR092C 3057 nt3.23□□□□□ -1.89
RPG1P38249 HSL1YKL101W 4557 nt3.22□□□□□ -1.89
RPG1P38249 RIF1YBR275C 5751 nt3.2□□□□□ -1.9
RPG1P38249 tQ(UUG)QtQ(UUG)Q 76 nt3.19□□□□□ -1.9
RPG1P38249 TOM1YDR457W 9807 nt3.19□□□□□ -1.9
RPG1P38249 GEA2YEL022W 4380 nt3.19□□□□□ -1.9
RPG1P38249 FAR11YNL127W 2862 nt3.17□□□□□ -1.9
RPG1P38249 DYN1YKR054C 12279 nt3.16□□□□□ -1.9
RPG1P38249 KAP122YGL016W 3246 nt3.15□□□□□ -1.91
RPG1P38249 SPF1YEL031W 3648 nt3.15□□□□□ -1.91
RPG1P38249 YHR086W-AYHR086W-A 162 nt3.14□□□□□ -1.91
RPG1P38249 FYV8YGR196C 2454 nt3.14□□□□□ -1.91
RPG1P38249 MLP2YIL149C 5040 nt3.13□□□□□ -1.91
RPG1P38249 SEC7YDR170C 6030 nt3.12□□□□□ -1.91
RPG1P38249 GEA1YJR031C 4227 nt3.11□□□□□ -1.91
RPG1P38249 UBP2YOR124C 3819 nt3.1□□□□□ -1.91
RPG1P38249 SAP1YER047C 2694 nt3.09□□□□□ -1.91
RPG1P38249 YER090C-AYER090C-A 90 nt3.09□□□□□ -1.91
RPG1P38249 BCK1YJL095W 4437 nt3.06□□□□□ -1.92
RPG1P38249 YKL106C-AYKL106C-A 120 nt3.06□□□□□ -1.92
RPG1P38249 YMR160WYMR160W 2451 nt3.05□□□□□ -1.92
RPG1P38249 FLO11YIR019C 4104 nt3.05□□□□□ -1.92
RPG1P38249 HER1YOR227W 3741 nt3.05□□□□□ -1.92
RPG1P38249 ECM29YHL030W 5607 nt3.05□□□□□ -1.92
RPG1P38249 ESL2YKR096W 3588 nt3.04□□□□□ -1.92
RPG1P38249 NUP170YBL079W 4509 nt3.03□□□□□ -1.92
RPG1P38249 AXL1YPR122W 3627 nt3.02□□□□□ -1.93
RPG1P38249 YDR098C-BYDR098C-B 5268 nt3.01□□□□□ -1.93
RPG1P38249 YDR210C-DYDR210C-D 5268 nt3.01□□□□□ -1.93
RPG1P38249 YDR316W-BYDR316W-B 5268 nt3.01□□□□□ -1.93
RPG1P38249 YDR365W-BYDR365W-B 5268 nt3.01□□□□□ -1.93
RPG1P38249 YER138CYER138C 5268 nt3.01□□□□□ -1.93
RPG1P38249 YER160CYER160C 5268 nt3.01□□□□□ -1.93
RPG1P38249 YGR038C-BYGR038C-B 5268 nt3.01□□□□□ -1.93
RPG1P38249 YGR161C-DYGR161C-D 5268 nt3.01□□□□□ -1.93
RPG1P38249 YJR027WYJR027W 5268 nt3.01□□□□□ -1.93
RPG1P38249 YLR157C-BYLR157C-B 5268 nt3.01□□□□□ -1.93
RPG1P38249 YML039WYML039W 5268 nt3.01□□□□□ -1.93
RPG1P38249 YML045WYML045W 5268 nt3.01□□□□□ -1.93
RPG1P38249 YMR050CYMR050C 5268 nt3.01□□□□□ -1.93
RPG1P38249 YOL103W-BYOL103W-B 5268 nt3.01□□□□□ -1.93
RPG1P38249 YBR012W-BYBR012W-B 5271 nt3.01□□□□□ -1.93
RPG1P38249 YOR142W-BYOR142W-B 5268 nt3.01□□□□□ -1.93
RPG1P38249 YPL257W-BYPL257W-B 5268 nt3.01□□□□□ -1.93
RPG1P38249 YPR158W-BYPR158W-B 5271 nt3.01□□□□□ -1.93
RPG1P38249 APL3YBL037W 3078 nt3.01□□□□□ -1.93
RPG1P38249 YBL005W-BYBL005W-B 5268 nt3□□□□□ -1.93
RPG1P38249 RAV1YJR033C 4074 nt2.99□□□□□ -1.93
RPG1P38249 SMC4YLR086W 4257 nt2.98□□□□□ -1.93
RPG1P38249 ATG9YDL149W 2994 nt2.98□□□□□ -1.93
RPG1P38249 BNR1YIL159W 4128 nt2.97□□□□□ -1.93
RPG1P38249 ESC1YMR219W 4977 nt2.97□□□□□ -1.93
RPG1P38249 PDR11YIL013C 4236 nt2.96□□□□□ -1.94
RPG1P38249 TOP2YNL088W 4287 nt2.96□□□□□ -1.94
RPG1P38249 snR67snR67 82 nt2.95□□□□□ -1.94
RPG1P38249 KRE33YNL132W 3171 nt2.91□□□□□ -1.94
RPG1P38249 YOL098CYOL098C 3114 nt2.89□□□□□ -1.95
RPG1P38249 CYR1YJL005W 6081 nt2.88□□□□□ -1.95
RPG1P38249 NUM1YDR150W 8247 nt2.88□□□□□ -1.95
RPG1P38249 YLR419WYLR419W 4308 nt2.87□□□□□ -1.95
RPG1P38249 YLL006W-AYLL006W-A 177 nt2.87□□□□□ -1.95
RPG1P38249 SKI3YPR189W 4299 nt2.85□□□□□ -1.95
RPG1P38249 PSD2YGR170W 3417 nt2.85□□□□□ -1.95
RPG1P38249 INO80YGL150C 4470 nt2.84□□□□□ -1.96
RPG1P38249 TOR1YJR066W 7413 nt2.84□□□□□ -1.96
RPG1P38249 NUP192YJL039C 5052 nt2.81□□□□□ -1.96
RPG1P38249 SWI4YER111C 3282 nt2.81□□□□□ -1.96
RPG1P38249 MYO4YAL029C 4416 nt2.79□□□□□ -1.96
RPG1P38249 NUP145YGL092W 3954 nt2.78□□□□□ -1.96
RPG1P38249 UBR2YLR024C 5619 nt2.76□□□□□ -1.97
RPG1P38249 NEO1YIL048W 3456 nt2.76□□□□□ -1.97
RPG1P38249 YHR180W-AYHR180W-A 183 nt2.75□□□□□ -1.97
RPG1P38249 YNL284C-BYNL284C-B 5268 nt2.75□□□□□ -1.97
RPG1P38249 CSF1YLR087C 8877 nt2.75□□□□□ -1.97
RPG1P38249 SEC31YDL195W 3822 nt2.74□□□□□ -1.97
RPG1P38249 YNL054W-BYNL054W-B 5250 nt2.72□□□□□ -1.97
RPG1P38249 TRA1YHR099W 11235 nt2.72□□□□□ -1.97
RPG1P38249 CLU1YMR012W 3834 nt2.65□□□□□ -1.98
RPG1P38249 snR77snR77 88 nt2.6□□□□□ -1.99
RPG1P38249 BNI1YNL271C 5862 nt2.57□□□□□ -2
RPG1P38249 SPT7YBR081C 3999 nt2.56□□□□□ -2
RPG1P38249 LAA1YJL207C 6045 nt2.55□□□□□ -2
RPG1P38249 NUP188YML103C 4968 nt2.54□□□□□ -2
RPG1P38249 BPH1YCR032W 6504 nt2.54□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 79.5 ms