Protein–RNA interactions for Protein: P33417

IXR1, Intrastrand cross-link recognition protein, yeastyeast

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IXR1P33417 DNF1YER166W 4716 nt2.25□□□□□ -2.05
IXR1P33417 MYO4YAL029C 4416 nt2.25□□□□□ -2.05
IXR1P33417 NNF2YGR089W 2811 nt2.24□□□□□ -2.05
IXR1P33417 HUG1YML058W-A 207 nt2.24□□□□□ -2.05
IXR1P33417 IRA2YOL081W 9240 nt2.24□□□□□ -2.05
IXR1P33417 YBR200W-AYBR200W-A 165 nt2.23□□□□□ -2.05
IXR1P33417 CHS1YNL192W 3396 nt2.23□□□□□ -2.05
IXR1P33417 SPF1YEL031W 3648 nt2.22□□□□□ -2.05
IXR1P33417 CSF1YLR087C 8877 nt2.22□□□□□ -2.05
IXR1P33417 YLR419WYLR419W 4308 nt2.21□□□□□ -2.06
IXR1P33417 IRC20YLR247C 4671 nt2.21□□□□□ -2.06
IXR1P33417 BNI1YNL271C 5862 nt2.21□□□□□ -2.06
IXR1P33417 PIK1YNL267W 3201 nt2.21□□□□□ -2.06
IXR1P33417 TOR1YJR066W 7413 nt2.2□□□□□ -2.06
IXR1P33417 SEC16YPL085W 6588 nt2.2□□□□□ -2.06
IXR1P33417 BRE1YDL074C 2103 nt2.2□□□□□ -2.06
IXR1P33417 KCS1YDR017C 3153 nt2.2□□□□□ -2.06
IXR1P33417 KAP122YGL016W 3246 nt2.18□□□□□ -2.06
IXR1P33417 SEC31YDL195W 3822 nt2.18□□□□□ -2.06
IXR1P33417 YKL225WYKL225W 348 nt2.18□□□□□ -2.06
IXR1P33417 snR14snR14 160 nt2.18□□□□□ -2.06
IXR1P33417 YER078W-AYER078W-A 165 nt2.15□□□□□ -2.07
IXR1P33417 CDC25YLR310C 4770 nt2.15□□□□□ -2.07
IXR1P33417 PKH3YDR466W 2697 nt2.14□□□□□ -2.07
IXR1P33417 YKL096C-BYKL096C-B 150 nt2.14□□□□□ -2.07
IXR1P33417 DGR1YNL130C-A 147 nt2.14□□□□□ -2.07
IXR1P33417 PEP1YBL017C 4740 nt2.13□□□□□ -2.07
IXR1P33417 SMC4YLR086W 4257 nt2.13□□□□□ -2.07
IXR1P33417 SXM1YDR395W 2835 nt2.13□□□□□ -2.07
IXR1P33417 STO1YMR125W 2586 nt2.12□□□□□ -2.07
IXR1P33417 SEC3YER008C 4011 nt2.12□□□□□ -2.07
IXR1P33417 UBR2YLR024C 5619 nt2.12□□□□□ -2.07
IXR1P33417 tD(GUC)QtD(GUC)Q 75 nt2.12□□□□□ -2.07
IXR1P33417 YLR149C-AYLR149C-A 87 nt2.12□□□□□ -2.07
IXR1P33417 YMR272W-BYMR272W-B 108 nt2.12□□□□□ -2.07
IXR1P33417 SAC3YDR159W 3906 nt2.11□□□□□ -2.07
IXR1P33417 SKI3YPR189W 4299 nt2.11□□□□□ -2.07
IXR1P33417 ATG9YDL149W 2994 nt2.11□□□□□ -2.07
IXR1P33417 YOL098CYOL098C 3114 nt2.1□□□□□ -2.07
IXR1P33417 TOR2YKL203C 7425 nt2.1□□□□□ -2.07
IXR1P33417 YPL060C-AYPL060C-A 3315 nt2.09□□□□□ -2.07
IXR1P33417 NUP192YJL039C 5052 nt2.09□□□□□ -2.07
IXR1P33417 YLR299C-AYLR299C-A 93 nt2.09□□□□□ -2.07
IXR1P33417 MGA2YIR033W 3342 nt2.09□□□□□ -2.07
IXR1P33417 FAB1YFR019W 6837 nt2.08□□□□□ -2.08
IXR1P33417 SPP41YDR464W 4308 nt2.07□□□□□ -2.08
IXR1P33417 SEC8YPR055W 3198 nt2.06□□□□□ -2.08
IXR1P33417 BEM3YPL115C 3387 nt2.06□□□□□ -2.08
IXR1P33417 snR75snR75 89 nt2.05□□□□□ -2.08
IXR1P33417 YPR160W-AYPR160W-A 81 nt2.05□□□□□ -2.08
IXR1P33417 YHR180W-AYHR180W-A 183 nt2.04□□□□□ -2.08
IXR1P33417 ULP2YIL031W 3105 nt2.04□□□□□ -2.08
IXR1P33417 APL3YBL037W 3078 nt2.03□□□□□ -2.08
IXR1P33417 MSH3YCR092C 3057 nt2.02□□□□□ -2.09
IXR1P33417 YOR093CYOR093C 4947 nt2.01□□□□□ -2.09
IXR1P33417 tN(GUU)QtN(GUU)Q 71 nt2.01□□□□□ -2.09
IXR1P33417 EST1YLR233C 2100 nt2.01□□□□□ -2.09
IXR1P33417 GEA2YEL022W 4380 nt2.01□□□□□ -2.09
IXR1P33417 NEO1YIL048W 3456 nt2.01□□□□□ -2.09
IXR1P33417 PMD1YER132C 5262 nt2.01□□□□□ -2.09
IXR1P33417 YSP1YHR155W 3687 nt2.01□□□□□ -2.09
IXR1P33417 NST1YNL091W 3723 nt2□□□□□ -2.09
IXR1P33417 MSN5YDR335W 3675 nt1.99□□□□□ -2.09
IXR1P33417 YDL159C-BYDL159C-B 177 nt1.99□□□□□ -2.09
IXR1P33417 YLR399W-AYLR399W-A 105 nt1.99□□□□□ -2.09
IXR1P33417 PRP16YKR086W 3216 nt1.99□□□□□ -2.09
IXR1P33417 FKS1YLR342W 5631 nt1.99□□□□□ -2.09
IXR1P33417 SSK2YNR031C 4740 nt1.98□□□□□ -2.09
IXR1P33417 PET127YOR017W 2403 nt1.97□□□□□ -2.09
IXR1P33417 snR69snR69 101 nt1.97□□□□□ -2.09
IXR1P33417 SWI4YER111C 3282 nt1.97□□□□□ -2.09
IXR1P33417 BPH1YCR032W 6504 nt1.96□□□□□ -2.1
IXR1P33417 TRM732YMR259C 4263 nt1.96□□□□□ -2.1
IXR1P33417 YDL159W-AYDL159W-A 132 nt1.94□□□□□ -2.1
IXR1P33417 UBP2YOR124C 3819 nt1.94□□□□□ -2.1
IXR1P33417 USO1YDL058W 5373 nt1.94□□□□□ -2.1
IXR1P33417 NUP145YGL092W 3954 nt1.93□□□□□ -2.1
IXR1P33417 RPL41AYDL184C 78 nt1.93□□□□□ -2.1
IXR1P33417 snR38snR38 95 nt1.93□□□□□ -2.1
IXR1P33417 AI1Q0050 2505 nt1.93□□□□□ -2.1
IXR1P33417 YML054C-AYML054C-A 159 nt1.92□□□□□ -2.1
IXR1P33417 YHR214C-BYHR214C-B 5382 nt1.91□□□□□ -2.1
IXR1P33417 CSE1YGL238W 2883 nt1.91□□□□□ -2.1
IXR1P33417 PAU12YGR294W 363 nt1.91□□□□□ -2.1
IXR1P33417 YHR180C-BYHR180C-B 105 nt1.91□□□□□ -2.1
IXR1P33417 TMA7YLR262C-A 195 nt1.91□□□□□ -2.1
IXR1P33417 RDS3YPR094W 324 nt1.91□□□□□ -2.1
IXR1P33417 YBR296C-AYBR296C-A 120 nt1.91□□□□□ -2.1
IXR1P33417 PAU24YBR301W 363 nt1.91□□□□□ -2.1
IXR1P33417 DNF3YMR162C 4971 nt1.89□□□□□ -2.11
IXR1P33417 CFT1YDR301W 4074 nt1.88□□□□□ -2.11
IXR1P33417 MON2YNL297C 4911 nt1.87□□□□□ -2.11
IXR1P33417 SKI7YOR076C 2244 nt1.87□□□□□ -2.11
IXR1P33417 NIP1YMR309C 2439 nt1.86□□□□□ -2.11
IXR1P33417 FIG2YCR089W 4830 nt1.86□□□□□ -2.11
IXR1P33417 CCH1YGR217W 6120 nt1.83□□□□□ -2.12
IXR1P33417 BST1YFL025C 3090 nt1.83□□□□□ -2.12
IXR1P33417 YMR045CYMR045C 5268 nt1.82□□□□□ -2.12
IXR1P33417 CLU1YMR012W 3834 nt1.82□□□□□ -2.12
IXR1P33417 CDC39YCR093W 6327 nt1.81□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms