Protein–RNA interactions for Protein: P09880

TRL1, tRNA ligase, yeastyeast

Known RBP Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRL1P09880 SEC3YER008C 4011 nt1.81□□□□□ -2.12
TRL1P09880 ANS1YHR126C 480 nt1.81□□□□□ -2.12
TRL1P09880 IRC20YLR247C 4671 nt1.81□□□□□ -2.12
TRL1P09880 tT(UGU)HtT(UGU)H 72 nt1.8□□□□□ -2.12
TRL1P09880 PMD1YER132C 5262 nt1.79□□□□□ -2.12
TRL1P09880 YIL071W-AYIL071W-A 477 nt1.79□□□□□ -2.12
TRL1P09880 SEC8YPR055W 3198 nt1.78□□□□□ -2.12
TRL1P09880 PRP16YKR086W 3216 nt1.78□□□□□ -2.13
TRL1P09880 CAT8YMR280C 4302 nt1.77□□□□□ -2.13
TRL1P09880 NUP188YML103C 4968 nt1.77□□□□□ -2.13
TRL1P09880 BEM3YPL115C 3387 nt1.77□□□□□ -2.13
TRL1P09880 TFB5YDR079C-A 219 nt1.76□□□□□ -2.13
TRL1P09880 YDR544CYDR544C 429 nt1.76□□□□□ -2.13
TRL1P09880 snR39BsnR39B 96 nt1.76□□□□□ -2.13
TRL1P09880 STF2YGR008C 255 nt1.75□□□□□ -2.13
TRL1P09880 YMR326CYMR326C 309 nt1.75□□□□□ -2.13
TRL1P09880 YBL109WYBL109W 336 nt1.75□□□□□ -2.13
TRL1P09880 RAD9YDR217C 3930 nt1.74□□□□□ -2.13
TRL1P09880 MSN5YDR335W 3675 nt1.74□□□□□ -2.13
TRL1P09880 tQ(UUG)E2tQ(UUG)E2 72 nt1.73□□□□□ -2.13
TRL1P09880 NUP157YER105C 4176 nt1.73□□□□□ -2.13
TRL1P09880 VPS15YBR097W 4365 nt1.71□□□□□ -2.14
TRL1P09880 snR61snR61 90 nt1.71□□□□□ -2.14
TRL1P09880 YHR131W-AYHR131W-A 246 nt1.71□□□□□ -2.14
TRL1P09880 YLR399W-AYLR399W-A 105 nt1.71□□□□□ -2.14
TRL1P09880 YNL103W-AYNL103W-A 90 nt1.71□□□□□ -2.14
TRL1P09880 YJL127W-AYJL127W-A 117 nt1.7□□□□□ -2.14
TRL1P09880 ASE1YOR058C 2658 nt1.69□□□□□ -2.14
TRL1P09880 DNF3YMR162C 4971 nt1.68□□□□□ -2.14
TRL1P09880 RPM2YML091C 3609 nt1.67□□□□□ -2.14
TRL1P09880 YDL073WYDL073W 2955 nt1.66□□□□□ -2.14
TRL1P09880 CCH1YGR217W 6120 nt1.65□□□□□ -2.15
TRL1P09880 COG6YNL041C 2520 nt1.65□□□□□ -2.15
TRL1P09880 YDR210WYDR210W 228 nt1.64□□□□□ -2.15
TRL1P09880 YPR160W-AYPR160W-A 81 nt1.64□□□□□ -2.15
TRL1P09880 TRM732YMR259C 4263 nt1.62□□□□□ -2.15
TRL1P09880 YSP1YHR155W 3687 nt1.62□□□□□ -2.15
TRL1P09880 YGR146C-AYGR146C-A 162 nt1.62□□□□□ -2.15
TRL1P09880 PET127YOR017W 2403 nt1.62□□□□□ -2.15
TRL1P09880 YHR217CYHR217C 462 nt1.6□□□□□ -2.15
TRL1P09880 KAP120YPL125W 3099 nt1.6□□□□□ -2.15
TRL1P09880 UBP3YER151C 2739 nt1.6□□□□□ -2.15
TRL1P09880 NUP192YJL039C 5052 nt1.58□□□□□ -2.16
TRL1P09880 LAA1YJL207C 6045 nt1.57□□□□□ -2.16
TRL1P09880 FYV8YGR196C 2454 nt1.56□□□□□ -2.16
TRL1P09880 SBH1YER087C-B 249 nt1.56□□□□□ -2.16
TRL1P09880 tN(GUU)QtN(GUU)Q 71 nt1.56□□□□□ -2.16
TRL1P09880 SSK2YNR031C 4740 nt1.56□□□□□ -2.16
TRL1P09880 CDC39YCR093W 6327 nt1.56□□□□□ -2.16
TRL1P09880 FIG2YCR089W 4830 nt1.55□□□□□ -2.16
TRL1P09880 YGL041C-BYGL041C-B 183 nt1.54□□□□□ -2.16
TRL1P09880 BIR1YJR089W 2865 nt1.52□□□□□ -2.17
TRL1P09880 SPC110YDR356W 2835 nt1.51□□□□□ -2.17
TRL1P09880 PIK1YNL267W 3201 nt1.5□□□□□ -2.17
TRL1P09880 MSH3YCR092C 3057 nt1.5□□□□□ -2.17
TRL1P09880 YNL266WYNL266W 420 nt1.5□□□□□ -2.17
TRL1P09880 YBR072C-AYBR072C-A 162 nt1.5□□□□□ -2.17
TRL1P09880 GLG1YKR058W 1851 nt1.5□□□□□ -2.17
TRL1P09880 SEC1YDR164C 2175 nt1.49□□□□□ -2.17
TRL1P09880 YDL247W-AYDL247W-A 75 nt1.48□□□□□ -2.17
TRL1P09880 ULP2YIL031W 3105 nt1.46□□□□□ -2.18
TRL1P09880 SPT7YBR081C 3999 nt1.46□□□□□ -2.18
TRL1P09880 BEM2YER155C 6504 nt1.45□□□□□ -2.18
TRL1P09880 tH(GUG)E1tH(GUG)E1 72 nt1.43□□□□□ -2.18
TRL1P09880 tH(GUG)E2tH(GUG)E2 72 nt1.43□□□□□ -2.18
TRL1P09880 tH(GUG)G1tH(GUG)G1 72 nt1.43□□□□□ -2.18
TRL1P09880 tH(GUG)G2tH(GUG)G2 72 nt1.43□□□□□ -2.18
TRL1P09880 tH(GUG)HtH(GUG)H 72 nt1.43□□□□□ -2.18
TRL1P09880 tH(GUG)KtH(GUG)K 72 nt1.43□□□□□ -2.18
TRL1P09880 tH(GUG)MtH(GUG)M 72 nt1.43□□□□□ -2.18
TRL1P09880 YGR130CYGR130C 2451 nt1.41□□□□□ -2.18
TRL1P09880 RCO1YMR075W 2055 nt1.39□□□□□ -2.19
TRL1P09880 HKR1YDR420W 5409 nt1.39□□□□□ -2.19
TRL1P09880 DOP1YDR141C 5097 nt1.38□□□□□ -2.19
TRL1P09880 YBR196C-AYBR196C-A 150 nt1.36□□□□□ -2.19
TRL1P09880 SCC2YDR180W 4482 nt1.34□□□□□ -2.19
TRL1P09880 CSE1YGL238W 2883 nt1.33□□□□□ -2.2
TRL1P09880 YAL037C-AYAL037C-A 93 nt1.33□□□□□ -2.2
TRL1P09880 YLL006W-AYLL006W-A 177 nt1.33□□□□□ -2.2
TRL1P09880 HUG1YML058W-A 207 nt1.31□□□□□ -2.2
TRL1P09880 SEC10YLR166C 2616 nt1.31□□□□□ -2.2
TRL1P09880 NNF2YGR089W 2811 nt1.3□□□□□ -2.2
TRL1P09880 snR81snR81 201 nt1.29□□□□□ -2.2
TRL1P09880 YPR117WYPR117W 7470 nt1.29□□□□□ -2.2
TRL1P09880 SIP4YJL089W 2490 nt1.28□□□□□ -2.2
TRL1P09880 IML1YJR138W 4755 nt1.27□□□□□ -2.21
TRL1P09880 LTE1YAL024C 4308 nt1.24□□□□□ -2.21
TRL1P09880 YNL284C-BYNL284C-B 5268 nt1.22□□□□□ -2.21
TRL1P09880 YOL083C-AYOL083C-A 141 nt1.22□□□□□ -2.21
TRL1P09880 VAM6YDL077C 3150 nt1.2□□□□□ -2.22
TRL1P09880 tS(GCU)Q1tS(GCU)Q1 86 nt1.19□□□□□ -2.22
TRL1P09880 tV(UAC)BtV(UAC)B 74 nt1.19□□□□□ -2.22
TRL1P09880 tV(UAC)DtV(UAC)D 74 nt1.19□□□□□ -2.22
TRL1P09880 NST1YNL091W 3723 nt1.18□□□□□ -2.22
TRL1P09880 snR69snR69 101 nt1.17□□□□□ -2.22
TRL1P09880 tD(GUC)QtD(GUC)Q 75 nt1.17□□□□□ -2.22
TRL1P09880 RKR1YMR247C 4689 nt1.17□□□□□ -2.22
TRL1P09880 NIP1YMR309C 2439 nt1.17□□□□□ -2.22
TRL1P09880 YJL077W-AYJL077W-A 87 nt1.16□□□□□ -2.22
TRL1P09880 YBL100W-CYBL100W-C 120 nt1.15□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 65.5 ms