Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 SPO21YOL091W 1830 nt0.41□□□□□ -2.34
SSH1P38353 PAA1YDR071C 576 nt0.4□□□□□ -2.35
SSH1P38353 YER137W-AYER137W-A 306 nt0.4□□□□□ -2.35
SSH1P38353 RPS25BYLR333C 327 nt0.4□□□□□ -2.35
SSH1P38353 YNL324WYNL324W 396 nt0.4□□□□□ -2.35
SSH1P38353 YOR011W-AYOR011W-A 207 nt0.4□□□□□ -2.35
SSH1P38353 YPL225WYPL225W 441 nt0.4□□□□□ -2.35
SSH1P38353 YPR160W-AYPR160W-A 81 nt0.4□□□□□ -2.35
SSH1P38353 HMRA2YCR096C 360 nt0.39□□□□□ -2.35
SSH1P38353 YIL134C-AYIL134C-A 204 nt0.39□□□□□ -2.35
SSH1P38353 BEM3YPL115C 3387 nt0.39□□□□□ -2.35
SSH1P38353 UTP20YBL004W 7482 nt0.38□□□□□ -2.35
SSH1P38353 RPL26BYGR034W 384 nt0.38□□□□□ -2.35
SSH1P38353 YHL046W-AYHL046W-A 327 nt0.38□□□□□ -2.35
SSH1P38353 ABF2YMR072W 552 nt0.38□□□□□ -2.35
SSH1P38353 FMP27YLR454W 7887 nt0.38□□□□□ -2.35
SSH1P38353 YJL127W-AYJL127W-A 117 nt0.37□□□□□ -2.35
SSH1P38353 YAR029WYAR029W 225 nt0.37□□□□□ -2.35
SSH1P38353 YLR264C-AYLR264C-A 117 nt0.37□□□□□ -2.35
SSH1P38353 YOR121CYOR121C 306 nt0.37□□□□□ -2.35
SSH1P38353 SGF11YPL047W 300 nt0.37□□□□□ -2.35
SSH1P38353 TRS65YGR166W 1683 nt0.37□□□□□ -2.35
SSH1P38353 YDL185C-AYDL185C-A 228 nt0.36□□□□□ -2.35
SSH1P38353 LEE1YPL054W 906 nt0.36□□□□□ -2.35
SSH1P38353 ESP1YGR098C 4893 nt0.36□□□□□ -2.35
SSH1P38353 OST4YDL232W 111 nt0.35□□□□□ -2.35
SSH1P38353 SEC8YPR055W 3198 nt0.35□□□□□ -2.35
SSH1P38353 YAL067W-AYAL067W-A 228 nt0.34□□□□□ -2.36
SSH1P38353 RPL35AYDL191W 363 nt0.33□□□□□ -2.36
SSH1P38353 SBH1YER087C-B 249 nt0.33□□□□□ -2.36
SSH1P38353 YAR053WYAR053W 297 nt0.33□□□□□ -2.36
SSH1P38353 YLR399W-AYLR399W-A 105 nt0.33□□□□□ -2.36
SSH1P38353 tW(UCA)QtW(UCA)Q 74 nt0.32□□□□□ -2.36
SSH1P38353 COX5BYIL111W 456 nt0.32□□□□□ -2.36
SSH1P38353 HTB2YBL002W 396 nt0.31□□□□□ -2.36
SSH1P38353 YMR001C-AYMR001C-A 231 nt0.31□□□□□ -2.36
SSH1P38353 YMR321CYMR321C 318 nt0.31□□□□□ -2.36
SSH1P38353 YOR293C-AYOR293C-A 150 nt0.31□□□□□ -2.36
SSH1P38353 YOR345CYOR345C 351 nt0.31□□□□□ -2.36
SSH1P38353 PRP42YDR235W 1635 nt0.31□□□□□ -2.36
SSH1P38353 PET111YMR257C 2403 nt0.3□□□□□ -2.36
SSH1P38353 YHR007C-AYHR007C-A 216 nt0.3□□□□□ -2.36
SSH1P38353 YOR192C-BYOR192C-B 5313 nt0.29□□□□□ -2.36
SSH1P38353 SSS1YDR086C 243 nt0.29□□□□□ -2.36
SSH1P38353 YAL068W-AYAL068W-A 255 nt0.29□□□□□ -2.36
SSH1P38353 AI1Q0050 2505 nt0.29□□□□□ -2.36
SSH1P38353 MLP2YIL149C 5040 nt0.28□□□□□ -2.36
SSH1P38353 snR190snR190 190 nt0.28□□□□□ -2.36
SSH1P38353 VIK1YPL253C 1944 nt0.28□□□□□ -2.36
SSH1P38353 IQG1YPL242C 4488 nt0.27□□□□□ -2.37
SSH1P38353 ULP2YIL031W 3105 nt0.27□□□□□ -2.37
SSH1P38353 YCR018C-AYCR018C-A 255 nt0.26□□□□□ -2.37
SSH1P38353 tN(GUU)QtN(GUU)Q 71 nt0.26□□□□□ -2.37
SSH1P38353 Q0144Q0144 330 nt0.26□□□□□ -2.37
SSH1P38353 YIL115W-AYIL115W-A 372 nt0.26□□□□□ -2.37
SSH1P38353 YJL026C-AYJL026C-A 222 nt0.26□□□□□ -2.37
SSH1P38353 COG8YML071C 1824 nt0.26□□□□□ -2.37
SSH1P38353 YDR048CYDR048C 315 nt0.25□□□□□ -2.37
SSH1P38353 YLR154W-FYLR154W-F 141 nt0.25□□□□□ -2.37
SSH1P38353 YLR222C-AYLR222C-A 231 nt0.25□□□□□ -2.37
SSH1P38353 BIL1YOR304C-A 231 nt0.25□□□□□ -2.37
SSH1P38353 YDR354C-AYDR354C-A 144 nt0.24□□□□□ -2.37
SSH1P38353 YMR307C-AYMR307C-A 195 nt0.24□□□□□ -2.37
SSH1P38353 BIR1YJR089W 2865 nt0.23□□□□□ -2.37
SSH1P38353 YGR035CYGR035C 351 nt0.22□□□□□ -2.37
SSH1P38353 MLP1YKR095W 5628 nt0.22□□□□□ -2.37
SSH1P38353 ORC3YLL004W 1851 nt0.2□□□□□ -2.38
SSH1P38353 RCO1YMR075W 2055 nt0.2□□□□□ -2.38
SSH1P38353 YCR022CYCR022C 345 nt0.2□□□□□ -2.38
SSH1P38353 ULI1YFR026C 510 nt0.2□□□□□ -2.38
SSH1P38353 BUL2YML111W 2763 nt0.19□□□□□ -2.38
SSH1P38353 YDR371C-AYDR371C-A 105 nt0.19□□□□□ -2.38
SSH1P38353 YER078W-AYER078W-A 165 nt0.19□□□□□ -2.38
SSH1P38353 RPS26AYGL189C 360 nt0.19□□□□□ -2.38
SSH1P38353 RPS27BYHR021C 249 nt0.19□□□□□ -2.38
SSH1P38353 STE5YDR103W 2754 nt0.18□□□□□ -2.38
SSH1P38353 MYO1YHR023W 5787 nt0.18□□□□□ -2.38
SSH1P38353 YKL136WYKL136W 399 nt0.18□□□□□ -2.38
SSH1P38353 YAL063C-AYAL063C-A 291 nt0.18□□□□□ -2.38
SSH1P38353 YOL013W-AYOL013W-A 192 nt0.18□□□□□ -2.38
SSH1P38353 YPR092WYPR092W 306 nt0.18□□□□□ -2.38
SSH1P38353 VAR1Q0140 1197 nt0.17□□□□□ -2.38
SSH1P38353 YLR282CYLR282C 342 nt0.17□□□□□ -2.38
SSH1P38353 YNL146WYNL146W 303 nt0.17□□□□□ -2.38
SSH1P38353 NNF2YGR089W 2811 nt0.17□□□□□ -2.38
SSH1P38353 COY1YKL179C 2040 nt0.16□□□□□ -2.38
SSH1P38353 YDR157WYDR157W 402 nt0.16□□□□□ -2.38
SSH1P38353 CSE2YNR010W 450 nt0.16□□□□□ -2.38
SSH1P38353 NIP1YMR309C 2439 nt0.15□□□□□ -2.39
SSH1P38353 YPR016W-AYPR016W-A 261 nt0.15□□□□□ -2.39
SSH1P38353 YLR041WYLR041W 321 nt0.14□□□□□ -2.39
SSH1P38353 YOR161W-AYOR161W-A 81 nt0.14□□□□□ -2.39
SSH1P38353 snR60snR60 104 nt0.13□□□□□ -2.39
SSH1P38353 YBL100W-BYBL100W-B 5313 nt0.13□□□□□ -2.39
SSH1P38353 YNL054W-BYNL054W-B 5250 nt0.13□□□□□ -2.39
SSH1P38353 YEL020C-BYEL020C-B 198 nt0.12□□□□□ -2.39
SSH1P38353 YDR118W-AYDR118W-A 117 nt0.1□□□□□ -2.39
SSH1P38353 YGL123C-AYGL123C-A 231 nt0.1□□□□□ -2.39
SSH1P38353 YFL063WYFL063W 456 nt0.09□□□□□ -2.4
SSH1P38353 HTL1YCR020W-B 237 nt0.08□□□□□ -2.4
Retrieved 100 of 7,029 protein–RNA pairs in 106.1 ms