Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.37■□□□□ 0.69
KRT78Q8N1N4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KRT78Q8N1N4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.37■□□□□ 0.69
KRT78Q8N1N4 SLC29A4P1-201ENST00000398760 971 ntBASIC19.37■□□□□ 0.69
KRT78Q8N1N4 BX276092.2-201ENST00000417668 665 ntBASIC19.37■□□□□ 0.69
KRT78Q8N1N4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.37■□□□□ 0.69
KRT78Q8N1N4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT78Q8N1N4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
KRT78Q8N1N4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT78Q8N1N4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KRT78Q8N1N4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT78Q8N1N4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.37■□□□□ 0.69
KRT78Q8N1N4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.37■□□□□ 0.69
KRT78Q8N1N4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 GPX1P1-201ENST00000388829 606 ntBASIC19.36■□□□□ 0.69
KRT78Q8N1N4 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.36■□□□□ 0.69
KRT78Q8N1N4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 NCF1B-203ENST00000435988 1254 ntBASIC19.36■□□□□ 0.69
KRT78Q8N1N4 C2orf69P4-201ENST00000565394 541 ntBASIC19.36■□□□□ 0.69
KRT78Q8N1N4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT78Q8N1N4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.35■□□□□ 0.69
KRT78Q8N1N4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KRT78Q8N1N4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT78Q8N1N4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
KRT78Q8N1N4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT78Q8N1N4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT78Q8N1N4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
KRT78Q8N1N4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.35■□□□□ 0.69
KRT78Q8N1N4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT78Q8N1N4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KRT78Q8N1N4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.35■□□□□ 0.69
KRT78Q8N1N4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT78Q8N1N4 SLC25A24-204ENST00000569674 2357 ntBASIC19.35■□□□□ 0.69
KRT78Q8N1N4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT78Q8N1N4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT78Q8N1N4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT78Q8N1N4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT78Q8N1N4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT78Q8N1N4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
KRT78Q8N1N4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT78Q8N1N4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KRT78Q8N1N4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KRT78Q8N1N4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT78Q8N1N4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.34■□□□□ 0.69
KRT78Q8N1N4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KRT78Q8N1N4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT78Q8N1N4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KRT78Q8N1N4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.34■□□□□ 0.69
KRT78Q8N1N4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
KRT78Q8N1N4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
KRT78Q8N1N4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.34■□□□□ 0.69
KRT78Q8N1N4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.34■□□□□ 0.69
KRT78Q8N1N4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.34■□□□□ 0.69
KRT78Q8N1N4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT78Q8N1N4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT78Q8N1N4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT78Q8N1N4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.34■□□□□ 0.69
KRT78Q8N1N4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KRT78Q8N1N4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
KRT78Q8N1N4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.69
KRT78Q8N1N4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KRT78Q8N1N4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KRT78Q8N1N4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.69
KRT78Q8N1N4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
KRT78Q8N1N4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
KRT78Q8N1N4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
KRT78Q8N1N4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
KRT78Q8N1N4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KRT78Q8N1N4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KRT78Q8N1N4 MIPEPP3-201ENST00000412105 444 ntBASIC19.33■□□□□ 0.68
KRT78Q8N1N4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.33■□□□□ 0.68
KRT78Q8N1N4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
KRT78Q8N1N4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.33■□□□□ 0.68
KRT78Q8N1N4 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.33■□□□□ 0.68
KRT78Q8N1N4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
KRT78Q8N1N4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
KRT78Q8N1N4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT78Q8N1N4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms