Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 YHR180W-AYHR180W-A 183 nt2.13□□□□□ -2.07
YLR040CQ07988 SLD3YGL113W 2007 nt2.13□□□□□ -2.07
YLR040CQ07988 SSD1YDR293C 3753 nt2.13□□□□□ -2.07
YLR040CQ07988 APL5YPL195W 2799 nt2.13□□□□□ -2.07
YLR040CQ07988 TOF1YNL273W 3717 nt2.13□□□□□ -2.07
YLR040CQ07988 HSH155YMR288W 2916 nt2.12□□□□□ -2.07
YLR040CQ07988 YBR099CYBR099C 384 nt2.12□□□□□ -2.07
YLR040CQ07988 MMS22YLR320W 4365 nt2.12□□□□□ -2.07
YLR040CQ07988 DGR2YKL121W 2559 nt2.11□□□□□ -2.07
YLR040CQ07988 PTP2YOR208W 2253 nt2.11□□□□□ -2.07
YLR040CQ07988 YPR097WYPR097W 3222 nt2.1□□□□□ -2.07
YLR040CQ07988 DNF1YER166W 4716 nt2.1□□□□□ -2.07
YLR040CQ07988 CTF4YPR135W 2784 nt2.1□□□□□ -2.07
YLR040CQ07988 SEC16YPL085W 6588 nt2.09□□□□□ -2.07
YLR040CQ07988 IRC8YJL051W 2469 nt2.09□□□□□ -2.07
YLR040CQ07988 YIL134C-AYIL134C-A 204 nt2.09□□□□□ -2.07
YLR040CQ07988 ENV11YGR071C 2583 nt2.09□□□□□ -2.07
YLR040CQ07988 RAV1YJR033C 4074 nt2.09□□□□□ -2.08
YLR040CQ07988 APL2YKL135C 2181 nt2.09□□□□□ -2.08
YLR040CQ07988 MAK10YEL053C 2202 nt2.09□□□□□ -2.08
YLR040CQ07988 BNI1YNL271C 5862 nt2.08□□□□□ -2.08
YLR040CQ07988 YCR095W-AYCR095W-A 159 nt2.08□□□□□ -2.08
YLR040CQ07988 UBR1YGR184C 5853 nt2.07□□□□□ -2.08
YLR040CQ07988 SAP185YJL098W 3177 nt2.07□□□□□ -2.08
YLR040CQ07988 SIR4YDR227W 4077 nt2.07□□□□□ -2.08
YLR040CQ07988 PAA1YDR071C 576 nt2.07□□□□□ -2.08
YLR040CQ07988 YFR012W-AYFR012W-A 87 nt2.07□□□□□ -2.08
YLR040CQ07988 RPS30BYOR182C 192 nt2.07□□□□□ -2.08
YLR040CQ07988 TFC3YAL001C 3483 nt2.07□□□□□ -2.08
YLR040CQ07988 YCR038W-AYCR038W-A 126 nt2.06□□□□□ -2.08
YLR040CQ07988 SCP160YJL080C 3669 nt2.06□□□□□ -2.08
YLR040CQ07988 snR61snR61 90 nt2.05□□□□□ -2.08
YLR040CQ07988 YDR354C-AYDR354C-A 144 nt2.05□□□□□ -2.08
YLR040CQ07988 CMC4YMR194C-B 222 nt2.05□□□□□ -2.08
YLR040CQ07988 CDC31YOR257W 486 nt2.05□□□□□ -2.08
YLR040CQ07988 TOR1YJR066W 7413 nt2.05□□□□□ -2.08
YLR040CQ07988 GIP3YPL137C 3831 nt2.05□□□□□ -2.08
YLR040CQ07988 MLH3YPL164C 2148 nt2.05□□□□□ -2.08
YLR040CQ07988 RGA1YOR127W 3024 nt2.04□□□□□ -2.08
YLR040CQ07988 tL(UAA)QtL(UAA)Q 85 nt2.04□□□□□ -2.08
YLR040CQ07988 SAP190YKR028W 3102 nt2.04□□□□□ -2.08
YLR040CQ07988 MET18YIL128W 3099 nt2.03□□□□□ -2.08
YLR040CQ07988 YJL052C-AYJL052C-A 120 nt2.03□□□□□ -2.08
YLR040CQ07988 COX12YLR038C 252 nt2.03□□□□□ -2.08
YLR040CQ07988 ATG11YPR049C 3537 nt2.03□□□□□ -2.09
YLR040CQ07988 VPS8YAL002W 3825 nt2.02□□□□□ -2.09
YLR040CQ07988 ALK1YGL021W 2283 nt2.02□□□□□ -2.09
YLR040CQ07988 YDR521WYDR521W 336 nt2.02□□□□□ -2.09
YLR040CQ07988 YNL211CYNL211C 261 nt2.02□□□□□ -2.09
YLR040CQ07988 UFD4YKL010C 4452 nt2.01□□□□□ -2.09
YLR040CQ07988 IFH1YLR223C 3258 nt2.01□□□□□ -2.09
YLR040CQ07988 YOR019WYOR019W 2193 nt2.01□□□□□ -2.09
YLR040CQ07988 OST4YDL232W 111 nt2.01□□□□□ -2.09
YLR040CQ07988 SBH1YER087C-B 249 nt2.01□□□□□ -2.09
YLR040CQ07988 YLR282CYLR282C 342 nt2.01□□□□□ -2.09
YLR040CQ07988 YNL067W-BYNL067W-B 141 nt2.01□□□□□ -2.09
YLR040CQ07988 IST2YBR086C 2841 nt2□□□□□ -2.09
YLR040CQ07988 MSH5YDL154W 2706 nt2□□□□□ -2.09
YLR040CQ07988 PRP5YBR237W 2550 nt2□□□□□ -2.09
YLR040CQ07988 YBR206WYBR206W 324 nt2□□□□□ -2.09
YLR040CQ07988 YLR035C-AYLR035C-A 3468 nt2□□□□□ -2.09
YLR040CQ07988 HMI1YOL095C 2121 nt2□□□□□ -2.09
YLR040CQ07988 DGR1YNL130C-A 147 nt1.99□□□□□ -2.09
YLR040CQ07988 BUD2YKL092C 3315 nt1.99□□□□□ -2.09
YLR040CQ07988 CHC1YGL206C 4962 nt1.99□□□□□ -2.09
YLR040CQ07988 BRE1YDL074C 2103 nt1.99□□□□□ -2.09
YLR040CQ07988 YOR343W-BYOR343W-B 5313 nt1.98□□□□□ -2.09
YLR040CQ07988 TOR2YKL203C 7425 nt1.98□□□□□ -2.09
YLR040CQ07988 PKH2YOL100W 3246 nt1.98□□□□□ -2.09
YLR040CQ07988 USO1YDL058W 5373 nt1.98□□□□□ -2.09
YLR040CQ07988 SPP41YDR464W 4308 nt1.97□□□□□ -2.09
YLR040CQ07988 YJL026C-AYJL026C-A 222 nt1.97□□□□□ -2.09
YLR040CQ07988 AGC1YPR021C 2709 nt1.97□□□□□ -2.09
YLR040CQ07988 UTP22YGR090W 3714 nt1.96□□□□□ -2.09
YLR040CQ07988 TRL1YJL087C 2484 nt1.96□□□□□ -2.1
YLR040CQ07988 TTI1YKL033W 3117 nt1.96□□□□□ -2.1
YLR040CQ07988 SOM1YEL059C-A 225 nt1.96□□□□□ -2.1
YLR040CQ07988 YIL002W-AYIL002W-A 210 nt1.96□□□□□ -2.1
YLR040CQ07988 CDC60YPL160W 3273 nt1.96□□□□□ -2.1
YLR040CQ07988 YGR109W-BYGR109W-B 4644 nt1.95□□□□□ -2.1
YLR040CQ07988 CHS6YJL099W 2241 nt1.95□□□□□ -2.1
YLR040CQ07988 CSF1YLR087C 8877 nt1.95□□□□□ -2.1
YLR040CQ07988 PET309YLR067C 2898 nt1.95□□□□□ -2.1
YLR040CQ07988 CTR9YOL145C 3234 nt1.94□□□□□ -2.1
YLR040CQ07988 APL1YJR005W 2103 nt1.94□□□□□ -2.1
YLR040CQ07988 COG4YPR105C 2586 nt1.94□□□□□ -2.1
YLR040CQ07988 YLL054CYLL054C 2532 nt1.93□□□□□ -2.1
YLR040CQ07988 FKS1YLR342W 5631 nt1.93□□□□□ -2.1
YLR040CQ07988 UBP2YOR124C 3819 nt1.93□□□□□ -2.1
YLR040CQ07988 IRE1YHR079C 3348 nt1.93□□□□□ -2.1
YLR040CQ07988 SYH1YPL105C 2550 nt1.93□□□□□ -2.1
YLR040CQ07988 YDL118WYDL118W 381 nt1.93□□□□□ -2.1
YLR040CQ07988 YMR175W-AYMR175W-A 195 nt1.93□□□□□ -2.1
YLR040CQ07988 SLI15YBR156C 2097 nt1.93□□□□□ -2.1
YLR040CQ07988 RTT101YJL047C 2529 nt1.93□□□□□ -2.1
YLR040CQ07988 INO80YGL150C 4470 nt1.93□□□□□ -2.1
YLR040CQ07988 KOG1YHR186C 4674 nt1.93□□□□□ -2.1
YLR040CQ07988 YKR075W-AYKR075W-A 270 nt1.92□□□□□ -2.1
YLR040CQ07988 YGL041C-BYGL041C-B 183 nt1.91□□□□□ -2.1
YLR040CQ07988 YHR214C-BYHR214C-B 5382 nt1.9□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 28.6 ms