Protein–RNA interactions for Protein: Q07457

BRE1, E3 ubiquitin-protein ligase BRE1, yeastyeast

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE1Q07457 YOR231C-AYOR231C-A 201 nt1.68□□□□□ -2.14
BRE1Q07457 LCD1YDR499W 2244 nt1.68□□□□□ -2.14
BRE1Q07457 PIK1YNL267W 3201 nt1.68□□□□□ -2.14
BRE1Q07457 PKH2YOL100W 3246 nt1.68□□□□□ -2.14
BRE1Q07457 YCK3YER123W 1575 nt1.68□□□□□ -2.14
BRE1Q07457 COG4YPR105C 2586 nt1.67□□□□□ -2.14
BRE1Q07457 AZF1YOR113W 2745 nt1.67□□□□□ -2.14
BRE1Q07457 PTP2YOR208W 2253 nt1.67□□□□□ -2.14
BRE1Q07457 HMRA2YCR096C 360 nt1.66□□□□□ -2.14
BRE1Q07457 SSS1YDR086C 243 nt1.66□□□□□ -2.14
BRE1Q07457 YDR344CYDR344C 444 nt1.66□□□□□ -2.14
BRE1Q07457 CLU1YMR012W 3834 nt1.66□□□□□ -2.14
BRE1Q07457 CCH1YGR217W 6120 nt1.66□□□□□ -2.14
BRE1Q07457 NUT1YGL151W 3399 nt1.65□□□□□ -2.15
BRE1Q07457 LAA1YJL207C 6045 nt1.65□□□□□ -2.15
BRE1Q07457 YBR174CYBR174C 315 nt1.64□□□□□ -2.15
BRE1Q07457 YLL007CYLL007C 1998 nt1.64□□□□□ -2.15
BRE1Q07457 RSM22YKL155C 1887 nt1.64□□□□□ -2.15
BRE1Q07457 POL5YEL055C 3069 nt1.64□□□□□ -2.15
BRE1Q07457 MPT5YGL178W 2580 nt1.63□□□□□ -2.15
BRE1Q07457 PBY1YBR094W 2262 nt1.63□□□□□ -2.15
BRE1Q07457 GPG1YGL121C 381 nt1.63□□□□□ -2.15
BRE1Q07457 YOR161W-BYOR161W-B 261 nt1.63□□□□□ -2.15
BRE1Q07457 COG8YML071C 1824 nt1.63□□□□□ -2.15
BRE1Q07457 YGR109W-BYGR109W-B 4644 nt1.63□□□□□ -2.15
BRE1Q07457 VIK1YPL253C 1944 nt1.62□□□□□ -2.15
BRE1Q07457 YGR069WYGR069W 336 nt1.62□□□□□ -2.15
BRE1Q07457 tQ(UUG)E2tQ(UUG)E2 72 nt1.62□□□□□ -2.15
BRE1Q07457 YBL008W-AYBL008W-A 240 nt1.62□□□□□ -2.15
BRE1Q07457 SEC3YER008C 4011 nt1.61□□□□□ -2.15
BRE1Q07457 RRT15YLR162W-A 189 nt1.61□□□□□ -2.15
BRE1Q07457 YPR010C-AYPR010C-A 219 nt1.61□□□□□ -2.15
BRE1Q07457 MMS4YBR098W 2076 nt1.61□□□□□ -2.15
BRE1Q07457 RAD61YDR014W 1944 nt1.6□□□□□ -2.15
BRE1Q07457 YCS4YLR272C 3531 nt1.6□□□□□ -2.15
BRE1Q07457 YNL028WYNL028W 318 nt1.6□□□□□ -2.15
BRE1Q07457 YOR008C-AYOR008C-A 225 nt1.6□□□□□ -2.15
BRE1Q07457 FYV8YGR196C 2454 nt1.59□□□□□ -2.15
BRE1Q07457 YMR321CYMR321C 318 nt1.59□□□□□ -2.15
BRE1Q07457 CSE2YNR010W 450 nt1.59□□□□□ -2.15
BRE1Q07457 YOR218CYOR218C 420 nt1.59□□□□□ -2.15
BRE1Q07457 FIG4YNL325C 2640 nt1.57□□□□□ -2.16
BRE1Q07457 IFH1YLR223C 3258 nt1.57□□□□□ -2.16
BRE1Q07457 HKR1YDR420W 5409 nt1.57□□□□□ -2.16
BRE1Q07457 YCR022CYCR022C 345 nt1.57□□□□□ -2.16
BRE1Q07457 RPS25BYLR333C 327 nt1.57□□□□□ -2.16
BRE1Q07457 snR14snR14 160 nt1.57□□□□□ -2.16
BRE1Q07457 PET127YOR017W 2403 nt1.56□□□□□ -2.16
BRE1Q07457 RPS27BYHR021C 249 nt1.56□□□□□ -2.16
BRE1Q07457 YOR282WYOR282W 321 nt1.56□□□□□ -2.16
BRE1Q07457 YDL206WYDL206W 2289 nt1.56□□□□□ -2.16
BRE1Q07457 YLR419WYLR419W 4308 nt1.56□□□□□ -2.16
BRE1Q07457 tH(GUG)E1tH(GUG)E1 72 nt1.55□□□□□ -2.16
BRE1Q07457 tH(GUG)E2tH(GUG)E2 72 nt1.55□□□□□ -2.16
BRE1Q07457 tH(GUG)G1tH(GUG)G1 72 nt1.55□□□□□ -2.16
BRE1Q07457 tH(GUG)G2tH(GUG)G2 72 nt1.55□□□□□ -2.16
BRE1Q07457 tH(GUG)HtH(GUG)H 72 nt1.55□□□□□ -2.16
BRE1Q07457 tH(GUG)KtH(GUG)K 72 nt1.55□□□□□ -2.16
BRE1Q07457 tH(GUG)MtH(GUG)M 72 nt1.55□□□□□ -2.16
BRE1Q07457 INA22YIR024C 651 nt1.55□□□□□ -2.16
BRE1Q07457 RAD9YDR217C 3930 nt1.55□□□□□ -2.16
BRE1Q07457 SMC1YFL008W 3678 nt1.54□□□□□ -2.16
BRE1Q07457 CDC25YLR310C 4770 nt1.54□□□□□ -2.16
BRE1Q07457 ALY2YJL084C 3141 nt1.53□□□□□ -2.16
BRE1Q07457 YGR130CYGR130C 2451 nt1.53□□□□□ -2.16
BRE1Q07457 YDR521WYDR521W 336 nt1.52□□□□□ -2.17
BRE1Q07457 YIL020C-AYIL020C-A 339 nt1.52□□□□□ -2.17
BRE1Q07457 BUD3YCL014W 4911 nt1.52□□□□□ -2.17
BRE1Q07457 SPO75YLL005C 2607 nt1.52□□□□□ -2.17
BRE1Q07457 YOR011W-AYOR011W-A 207 nt1.51□□□□□ -2.17
BRE1Q07457 SWI4YER111C 3282 nt1.51□□□□□ -2.17
BRE1Q07457 PDE2YOR360C 1581 nt1.51□□□□□ -2.17
BRE1Q07457 SPO21YOL091W 1830 nt1.5□□□□□ -2.17
BRE1Q07457 IML1YJR138W 4755 nt1.5□□□□□ -2.17
BRE1Q07457 YJL120WYJL120W 324 nt1.5□□□□□ -2.17
BRE1Q07457 STO1YMR125W 2586 nt1.49□□□□□ -2.17
BRE1Q07457 IES4YOR189W 351 nt1.49□□□□□ -2.17
BRE1Q07457 YPL152W-AYPL152W-A 99 nt1.49□□□□□ -2.17
BRE1Q07457 APL3YBL037W 3078 nt1.49□□□□□ -2.17
BRE1Q07457 NUP145YGL092W 3954 nt1.49□□□□□ -2.17
BRE1Q07457 MCM10YIL150C 1716 nt1.49□□□□□ -2.17
BRE1Q07457 YHR063W-AYHR063W-A 336 nt1.48□□□□□ -2.17
BRE1Q07457 SET3YKR029C 2256 nt1.47□□□□□ -2.17
BRE1Q07457 UBP3YER151C 2739 nt1.47□□□□□ -2.17
BRE1Q07457 SLD3YGL113W 2007 nt1.47□□□□□ -2.17
BRE1Q07457 PAN2YGL094C 3348 nt1.47□□□□□ -2.17
BRE1Q07457 CDC36YDL165W 576 nt1.47□□□□□ -2.17
BRE1Q07457 YLL020CYLL020C 306 nt1.47□□□□□ -2.17
BRE1Q07457 YBR206WYBR206W 324 nt1.47□□□□□ -2.17
BRE1Q07457 YBR221W-AYBR221W-A 105 nt1.47□□□□□ -2.17
BRE1Q07457 NUP188YML103C 4968 nt1.47□□□□□ -2.17
BRE1Q07457 TRM732YMR259C 4263 nt1.46□□□□□ -2.18
BRE1Q07457 YAR009CYAR009C 3591 nt1.46□□□□□ -2.18
BRE1Q07457 YJL197C-AYJL197C-A 282 nt1.46□□□□□ -2.18
BRE1Q07457 YEL020C-BYEL020C-B 198 nt1.45□□□□□ -2.18
BRE1Q07457 YGL052WYGL052W 306 nt1.45□□□□□ -2.18
BRE1Q07457 YBR200W-AYBR200W-A 165 nt1.45□□□□□ -2.18
BRE1Q07457 snR49snR49 165 nt1.45□□□□□ -2.18
BRE1Q07457 ECM12YHR021W-A 456 nt1.44□□□□□ -2.18
BRE1Q07457 YLR120W-AYLR120W-A 102 nt1.44□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 18.9 ms