Protein–RNA interactions for Protein: Q06549

CDD1, Cytidine deaminase, yeastyeast

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDD1Q06549 YMR175W-AYMR175W-A 195 nt0.98□□□□□ -2.25
CDD1Q06549 snR14snR14 160 nt0.98□□□□□ -2.25
CDD1Q06549 SWI6YLR182W 2412 nt0.98□□□□□ -2.25
CDD1Q06549 ZIP1YDR285W 2628 nt0.98□□□□□ -2.25
CDD1Q06549 UTP20YBL004W 7482 nt0.97□□□□□ -2.25
CDD1Q06549 YML007C-AYML007C-A 111 nt0.97□□□□□ -2.25
CDD1Q06549 YOL160WYOL160W 342 nt0.97□□□□□ -2.25
CDD1Q06549 YPR002C-AYPR002C-A 198 nt0.97□□□□□ -2.25
CDD1Q06549 INP2YMR163C 2118 nt0.97□□□□□ -2.25
CDD1Q06549 NHP2YDL208W 471 nt0.96□□□□□ -2.26
CDD1Q06549 YGL217CYGL217C 342 nt0.96□□□□□ -2.26
CDD1Q06549 PAM16YJL104W 450 nt0.96□□□□□ -2.26
CDD1Q06549 YBL008W-AYBL008W-A 240 nt0.96□□□□□ -2.26
CDD1Q06549 AI5_ALPHAQ0070 1893 nt0.96□□□□□ -2.26
CDD1Q06549 KAP120YPL125W 3099 nt0.95□□□□□ -2.26
CDD1Q06549 HTB2YBL002W 396 nt0.95□□□□□ -2.26
CDD1Q06549 RPB10YOR210W 213 nt0.95□□□□□ -2.26
CDD1Q06549 PAU24YBR301W 363 nt0.95□□□□□ -2.26
CDD1Q06549 CDC39YCR093W 6327 nt0.94□□□□□ -2.26
CDD1Q06549 NUP188YML103C 4968 nt0.94□□□□□ -2.26
CDD1Q06549 SEC5YDR166C 2916 nt0.94□□□□□ -2.26
CDD1Q06549 NPC2YDL046W 522 nt0.94□□□□□ -2.26
CDD1Q06549 RPL34BYIL052C 366 nt0.94□□□□□ -2.26
CDD1Q06549 YJR011CYJR011C 786 nt0.94□□□□□ -2.26
CDD1Q06549 TAR1YLR154W-C 375 nt0.94□□□□□ -2.26
CDD1Q06549 IFH1YLR223C 3258 nt0.94□□□□□ -2.26
CDD1Q06549 SLX4YLR135W 2247 nt0.93□□□□□ -2.26
CDD1Q06549 SLD3YGL113W 2007 nt0.93□□□□□ -2.26
CDD1Q06549 YER097WYER097W 330 nt0.93□□□□□ -2.26
CDD1Q06549 EMT1tM(CAU)D 73 nt0.93□□□□□ -2.26
CDD1Q06549 EMT5tM(CAU)J1 73 nt0.93□□□□□ -2.26
CDD1Q06549 EMT3tM(CAU)J2 73 nt0.93□□□□□ -2.26
CDD1Q06549 EMT4tM(CAU)M 73 nt0.93□□□□□ -2.26
CDD1Q06549 EMT2tM(CAU)O2 73 nt0.93□□□□□ -2.26
CDD1Q06549 RIM20YOR275C 1986 nt0.93□□□□□ -2.26
CDD1Q06549 RAD34YDR314C 2079 nt0.93□□□□□ -2.26
CDD1Q06549 SLY1YDR189W 2001 nt0.93□□□□□ -2.26
CDD1Q06549 ZIP2YGL249W 2115 nt0.92□□□□□ -2.26
CDD1Q06549 RAD50YNL250W 3939 nt0.92□□□□□ -2.26
CDD1Q06549 YDR048CYDR048C 315 nt0.92□□□□□ -2.26
CDD1Q06549 YDR183C-AYDR183C-A 258 nt0.92□□□□□ -2.26
CDD1Q06549 YDR344CYDR344C 444 nt0.92□□□□□ -2.26
CDD1Q06549 YFL032WYFL032W 321 nt0.92□□□□□ -2.26
CDD1Q06549 YKL118WYKL118W 312 nt0.92□□□□□ -2.26
CDD1Q06549 YAR029WYAR029W 225 nt0.92□□□□□ -2.26
CDD1Q06549 VPS54YDR027C 2670 nt0.92□□□□□ -2.26
CDD1Q06549 NOC3YLR002C 1992 nt0.91□□□□□ -2.26
CDD1Q06549 SSS1YDR086C 243 nt0.91□□□□□ -2.26
CDD1Q06549 YDR413CYDR413C 576 nt0.91□□□□□ -2.26
CDD1Q06549 PAU12YGR294W 363 nt0.91□□□□□ -2.26
CDD1Q06549 MAM33YIL070C 801 nt0.91□□□□□ -2.26
CDD1Q06549 YPL038W-AYPL038W-A 192 nt0.91□□□□□ -2.26
CDD1Q06549 snR36snR36 182 nt0.91□□□□□ -2.26
CDD1Q06549 FIG4YNL325C 2640 nt0.91□□□□□ -2.26
CDD1Q06549 ALY2YJL084C 3141 nt0.91□□□□□ -2.26
CDD1Q06549 YFL063WYFL063W 456 nt0.9□□□□□ -2.27
CDD1Q06549 YIL142C-AYIL142C-A 333 nt0.9□□□□□ -2.27
CDD1Q06549 PCC1YKR095W-A 267 nt0.9□□□□□ -2.27
CDD1Q06549 YPR010C-AYPR010C-A 219 nt0.9□□□□□ -2.27
CDD1Q06549 SAS3YBL052C 2496 nt0.9□□□□□ -2.27
CDD1Q06549 SCW11YGL028C 1629 nt0.89□□□□□ -2.27
CDD1Q06549 YIL115W-AYIL115W-A 372 nt0.89□□□□□ -2.27
CDD1Q06549 APL3YBL037W 3078 nt0.89□□□□□ -2.27
CDD1Q06549 YBR206WYBR206W 324 nt0.88□□□□□ -2.27
CDD1Q06549 YCK3YER123W 1575 nt0.87□□□□□ -2.27
CDD1Q06549 STB6YKL072W 2301 nt0.87□□□□□ -2.27
CDD1Q06549 HTL1YCR020W-B 237 nt0.87□□□□□ -2.27
CDD1Q06549 YDR521WYDR521W 336 nt0.87□□□□□ -2.27
CDD1Q06549 YOR108C-AYOR108C-A 210 nt0.87□□□□□ -2.27
CDD1Q06549 SPT21YMR179W 2277 nt0.87□□□□□ -2.27
CDD1Q06549 DBP6YNR038W 1890 nt0.86□□□□□ -2.27
CDD1Q06549 YJL120WYJL120W 324 nt0.86□□□□□ -2.27
CDD1Q06549 YKL136WYKL136W 399 nt0.86□□□□□ -2.27
CDD1Q06549 LCD1YDR499W 2244 nt0.86□□□□□ -2.27
CDD1Q06549 SET3YKR029C 2256 nt0.86□□□□□ -2.27
CDD1Q06549 YDL073WYDL073W 2955 nt0.86□□□□□ -2.27
CDD1Q06549 STE5YDR103W 2754 nt0.85□□□□□ -2.27
CDD1Q06549 ALG13YGL047W 609 nt0.85□□□□□ -2.27
CDD1Q06549 NUP157YER105C 4176 nt0.85□□□□□ -2.27
CDD1Q06549 SLI15YBR156C 2097 nt0.85□□□□□ -2.27
CDD1Q06549 SPO21YOL091W 1830 nt0.85□□□□□ -2.27
CDD1Q06549 YMR290W-AYMR290W-A 348 nt0.84□□□□□ -2.27
CDD1Q06549 YBR221W-AYBR221W-A 105 nt0.84□□□□□ -2.27
CDD1Q06549 YJR029WYJR029W 5268 nt0.83□□□□□ -2.28
CDD1Q06549 YPR137C-BYPR137C-B 5268 nt0.83□□□□□ -2.28
CDD1Q06549 YNL146WYNL146W 303 nt0.83□□□□□ -2.28
CDD1Q06549 YBR064WYBR064W 429 nt0.83□□□□□ -2.28
CDD1Q06549 YIL032CYIL032C 357 nt0.82□□□□□ -2.28
CDD1Q06549 YMR193C-AYMR193C-A 387 nt0.82□□□□□ -2.28
CDD1Q06549 YOR015WYOR015W 360 nt0.82□□□□□ -2.28
CDD1Q06549 STO1YMR125W 2586 nt0.82□□□□□ -2.28
CDD1Q06549 COG8YML071C 1824 nt0.81□□□□□ -2.28
CDD1Q06549 tF(GAA)BtF(GAA)B 73 nt0.81□□□□□ -2.28
CDD1Q06549 tF(GAA)FtF(GAA)F 73 nt0.81□□□□□ -2.28
CDD1Q06549 tF(GAA)GtF(GAA)G 73 nt0.81□□□□□ -2.28
CDD1Q06549 tF(GAA)H1tF(GAA)H1 73 nt0.81□□□□□ -2.28
CDD1Q06549 tF(GAA)H2tF(GAA)H2 73 nt0.81□□□□□ -2.28
CDD1Q06549 tF(GAA)MtF(GAA)M 73 nt0.81□□□□□ -2.28
CDD1Q06549 tF(GAA)P1tF(GAA)P1 73 nt0.81□□□□□ -2.28
CDD1Q06549 tF(GAA)P2tF(GAA)P2 73 nt0.81□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 41.1 ms