Protein–RNA interactions for Protein: Q04437

YKU80, ATP-dependent DNA helicase II subunit 2, yeastyeast

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YKU80Q04437 GPG1YGL121C 381 nt1.45□□□□□ -2.18
YKU80Q04437 YMR193C-AYMR193C-A 387 nt1.45□□□□□ -2.18
YKU80Q04437 snR14snR14 160 nt1.45□□□□□ -2.18
YKU80Q04437 AHC1YOR023C 1701 nt1.45□□□□□ -2.18
YKU80Q04437 DBP6YNR038W 1890 nt1.44□□□□□ -2.18
YKU80Q04437 YDR183C-AYDR183C-A 258 nt1.44□□□□□ -2.18
YKU80Q04437 YOR231C-AYOR231C-A 201 nt1.44□□□□□ -2.18
YKU80Q04437 SWI4YER111C 3282 nt1.44□□□□□ -2.18
YKU80Q04437 PTP2YOR208W 2253 nt1.43□□□□□ -2.18
YKU80Q04437 snR65snR65 100 nt1.43□□□□□ -2.18
YKU80Q04437 YFL063WYFL063W 456 nt1.43□□□□□ -2.18
YKU80Q04437 YIL102CYIL102C 306 nt1.43□□□□□ -2.18
YKU80Q04437 YIL115W-AYIL115W-A 372 nt1.43□□□□□ -2.18
YKU80Q04437 RRT15YLR162W-A 189 nt1.43□□□□□ -2.18
YKU80Q04437 PBY1YBR094W 2262 nt1.43□□□□□ -2.18
YKU80Q04437 APL3YBL037W 3078 nt1.41□□□□□ -2.18
YKU80Q04437 RPL34BYIL052C 366 nt1.41□□□□□ -2.18
YKU80Q04437 YOR282WYOR282W 321 nt1.41□□□□□ -2.18
YKU80Q04437 RSM22YKL155C 1887 nt1.41□□□□□ -2.18
YKU80Q04437 YLL007CYLL007C 1998 nt1.41□□□□□ -2.18
YKU80Q04437 YLR422WYLR422W 5799 nt1.41□□□□□ -2.18
YKU80Q04437 NUP145YGL092W 3954 nt1.4□□□□□ -2.18
YKU80Q04437 OST1YJL002C 1431 nt1.4□□□□□ -2.18
YKU80Q04437 ALY2YJL084C 3141 nt1.4□□□□□ -2.18
YKU80Q04437 YPR010C-AYPR010C-A 219 nt1.4□□□□□ -2.19
YKU80Q04437 ROM2YLR371W 4071 nt1.39□□□□□ -2.19
YKU80Q04437 HMRA2YCR096C 360 nt1.39□□□□□ -2.19
YKU80Q04437 PFD1YJL179W 330 nt1.39□□□□□ -2.19
YKU80Q04437 YPR063CYPR063C 423 nt1.39□□□□□ -2.19
YKU80Q04437 SPC98YNL126W 2541 nt1.39□□□□□ -2.19
YKU80Q04437 YDL206WYDL206W 2289 nt1.38□□□□□ -2.19
YKU80Q04437 NUP188YML103C 4968 nt1.38□□□□□ -2.19
YKU80Q04437 YIL032CYIL032C 357 nt1.38□□□□□ -2.19
YKU80Q04437 YLL020CYLL020C 306 nt1.38□□□□□ -2.19
YKU80Q04437 YBL008W-AYBL008W-A 240 nt1.38□□□□□ -2.19
YKU80Q04437 snR60snR60 104 nt1.37□□□□□ -2.19
YKU80Q04437 YIL020C-AYIL020C-A 339 nt1.37□□□□□ -2.19
YKU80Q04437 YCK3YER123W 1575 nt1.37□□□□□ -2.19
YKU80Q04437 LAA1YJL207C 6045 nt1.37□□□□□ -2.19
YKU80Q04437 NUP192YJL039C 5052 nt1.37□□□□□ -2.19
YKU80Q04437 STO1YMR125W 2586 nt1.36□□□□□ -2.19
YKU80Q04437 HTL1YCR020W-B 237 nt1.36□□□□□ -2.19
YKU80Q04437 NIP100YPL174C 2607 nt1.36□□□□□ -2.19
YKU80Q04437 RAD9YDR217C 3930 nt1.35□□□□□ -2.19
YKU80Q04437 PDE2YOR360C 1581 nt1.35□□□□□ -2.19
YKU80Q04437 YGR069WYGR069W 336 nt1.35□□□□□ -2.19
YKU80Q04437 YBR200W-AYBR200W-A 165 nt1.35□□□□□ -2.19
YKU80Q04437 YBR221W-AYBR221W-A 105 nt1.35□□□□□ -2.19
YKU80Q04437 IFH1YLR223C 3258 nt1.34□□□□□ -2.2
YKU80Q04437 MDS3YGL197W 4464 nt1.33□□□□□ -2.2
YKU80Q04437 TRM732YMR259C 4263 nt1.33□□□□□ -2.2
YKU80Q04437 YHL042WYHL042W 453 nt1.33□□□□□ -2.2
YKU80Q04437 CDC31YOR257W 486 nt1.33□□□□□ -2.2
YKU80Q04437 SET3YKR029C 2256 nt1.33□□□□□ -2.2
YKU80Q04437 CDC36YDL165W 576 nt1.32□□□□□ -2.2
YKU80Q04437 MSH3YCR092C 3057 nt1.32□□□□□ -2.2
YKU80Q04437 WAR1YML076C 2835 nt1.32□□□□□ -2.2
YKU80Q04437 SSS1YDR086C 243 nt1.31□□□□□ -2.2
YKU80Q04437 YDR344CYDR344C 444 nt1.31□□□□□ -2.2
YKU80Q04437 ALG13YGL047W 609 nt1.31□□□□□ -2.2
YKU80Q04437 SLD3YGL113W 2007 nt1.31□□□□□ -2.2
YKU80Q04437 RAD61YDR014W 1944 nt1.3□□□□□ -2.2
YKU80Q04437 PAN2YGL094C 3348 nt1.3□□□□□ -2.2
YKU80Q04437 CDC25YLR310C 4770 nt1.3□□□□□ -2.2
YKU80Q04437 YAR009CYAR009C 3591 nt1.29□□□□□ -2.2
YKU80Q04437 GEA2YEL022W 4380 nt1.29□□□□□ -2.2
YKU80Q04437 EAF1YDR359C 2949 nt1.28□□□□□ -2.2
YKU80Q04437 YDR366CYDR366C 399 nt1.28□□□□□ -2.2
YKU80Q04437 VIK1YPL253C 1944 nt1.27□□□□□ -2.21
YKU80Q04437 snR8snR8 190 nt1.27□□□□□ -2.21
YKU80Q04437 RPS25BYLR333C 327 nt1.27□□□□□ -2.21
YKU80Q04437 CSE2YNR010W 450 nt1.27□□□□□ -2.21
YKU80Q04437 YOR218CYOR218C 420 nt1.27□□□□□ -2.21
YKU80Q04437 YPL152W-AYPL152W-A 99 nt1.27□□□□□ -2.21
YKU80Q04437 COG8YML071C 1824 nt1.26□□□□□ -2.21
YKU80Q04437 YDR521WYDR521W 336 nt1.26□□□□□ -2.21
YKU80Q04437 YHR063W-AYHR063W-A 336 nt1.26□□□□□ -2.21
YKU80Q04437 YOR011W-AYOR011W-A 207 nt1.26□□□□□ -2.21
YKU80Q04437 STB6YKL072W 2301 nt1.25□□□□□ -2.21
YKU80Q04437 ECM12YHR021W-A 456 nt1.25□□□□□ -2.21
YKU80Q04437 YMR321CYMR321C 318 nt1.25□□□□□ -2.21
YKU80Q04437 RPL33BYOR234C 324 nt1.25□□□□□ -2.21
YKU80Q04437 INA22YIR024C 651 nt1.24□□□□□ -2.21
YKU80Q04437 YMR158W-BYMR158W-B 321 nt1.24□□□□□ -2.21
YKU80Q04437 YNL028WYNL028W 318 nt1.24□□□□□ -2.21
YKU80Q04437 YOR008C-AYOR008C-A 225 nt1.24□□□□□ -2.21
YKU80Q04437 YBR206WYBR206W 324 nt1.23□□□□□ -2.21
YKU80Q04437 NUP157YER105C 4176 nt1.23□□□□□ -2.21
YKU80Q04437 NST1YNL091W 3723 nt1.23□□□□□ -2.21
YKU80Q04437 tH(GUG)E1tH(GUG)E1 72 nt1.22□□□□□ -2.21
YKU80Q04437 tH(GUG)E2tH(GUG)E2 72 nt1.22□□□□□ -2.21
YKU80Q04437 tH(GUG)G1tH(GUG)G1 72 nt1.22□□□□□ -2.21
YKU80Q04437 tH(GUG)G2tH(GUG)G2 72 nt1.22□□□□□ -2.21
YKU80Q04437 tH(GUG)HtH(GUG)H 72 nt1.22□□□□□ -2.21
YKU80Q04437 tH(GUG)KtH(GUG)K 72 nt1.22□□□□□ -2.21
YKU80Q04437 tH(GUG)MtH(GUG)M 72 nt1.22□□□□□ -2.21
YKU80Q04437 RPS27BYHR021C 249 nt1.22□□□□□ -2.21
YKU80Q04437 snR49snR49 165 nt1.21□□□□□ -2.22
YKU80Q04437 YGL041CYGL041C 204 nt1.2□□□□□ -2.22
YKU80Q04437 YGL188C-AYGL188C-A 141 nt1.2□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 9.5 ms