Protein–RNA interactions for Protein: P50875

SPT20, Transcription factor SPT20, yeastyeast

Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT20P50875 YOR055WYOR055W 435 nt2.27□□□□□ -2.05
SPT20P50875 APL2YKL135C 2181 nt2.27□□□□□ -2.05
SPT20P50875 EDS1YBR033W 2760 nt2.27□□□□□ -2.05
SPT20P50875 KRE33YNL132W 3171 nt2.26□□□□□ -2.05
SPT20P50875 YLR035C-AYLR035C-A 3468 nt2.26□□□□□ -2.05
SPT20P50875 SAS3YBL052C 2496 nt2.26□□□□□ -2.05
SPT20P50875 VPS8YAL002W 3825 nt2.25□□□□□ -2.05
SPT20P50875 YCR038W-AYCR038W-A 126 nt2.25□□□□□ -2.05
SPT20P50875 YCR102W-AYCR102W-A 198 nt2.25□□□□□ -2.05
SPT20P50875 YGL041C-BYGL041C-B 183 nt2.25□□□□□ -2.05
SPT20P50875 YIL142C-AYIL142C-A 333 nt2.25□□□□□ -2.05
SPT20P50875 UBP15YMR304W 3693 nt2.25□□□□□ -2.05
SPT20P50875 HOS4YIL112W 3252 nt2.25□□□□□ -2.05
SPT20P50875 YDL118WYDL118W 381 nt2.24□□□□□ -2.05
SPT20P50875 YDR354C-AYDR354C-A 144 nt2.24□□□□□ -2.05
SPT20P50875 ZIP1YDR285W 2628 nt2.24□□□□□ -2.05
SPT20P50875 PTP2YOR208W 2253 nt2.24□□□□□ -2.05
SPT20P50875 SVL3YPL032C 2478 nt2.24□□□□□ -2.05
SPT20P50875 YEF3YLR249W 3135 nt2.23□□□□□ -2.05
SPT20P50875 YIL156W-BYIL156W-B 222 nt2.23□□□□□ -2.05
SPT20P50875 NUP170YBL079W 4509 nt2.23□□□□□ -2.05
SPT20P50875 PHO91YNR013C 2685 nt2.23□□□□□ -2.05
SPT20P50875 YNL018CYNL018C 1839 nt2.22□□□□□ -2.05
SPT20P50875 YDR521WYDR521W 336 nt2.22□□□□□ -2.05
SPT20P50875 YJL026C-AYJL026C-A 222 nt2.22□□□□□ -2.05
SPT20P50875 SBE22YHR103W 2559 nt2.22□□□□□ -2.05
SPT20P50875 DGR2YKL121W 2559 nt2.22□□□□□ -2.05
SPT20P50875 SAP185YJL098W 3177 nt2.22□□□□□ -2.05
SPT20P50875 CSF1YLR087C 8877 nt2.21□□□□□ -2.06
SPT20P50875 SOM1YEL059C-A 225 nt2.21□□□□□ -2.06
SPT20P50875 YOR019WYOR019W 2193 nt2.2□□□□□ -2.06
SPT20P50875 SCP160YJL080C 3669 nt2.2□□□□□ -2.06
SPT20P50875 STE11YLR362W 2154 nt2.2□□□□□ -2.06
SPT20P50875 MET18YIL128W 3099 nt2.19□□□□□ -2.06
SPT20P50875 YOL098CYOL098C 3114 nt2.19□□□□□ -2.06
SPT20P50875 STF2YGR008C 255 nt2.19□□□□□ -2.06
SPT20P50875 ALK1YGL021W 2283 nt2.19□□□□□ -2.06
SPT20P50875 VPS13YLL040C 9435 nt2.18□□□□□ -2.06
SPT20P50875 MSH5YDL154W 2706 nt2.18□□□□□ -2.06
SPT20P50875 YIL002W-AYIL002W-A 210 nt2.18□□□□□ -2.06
SPT20P50875 PRP5YBR237W 2550 nt2.18□□□□□ -2.06
SPT20P50875 MSB1YOR188W 3414 nt2.17□□□□□ -2.06
SPT20P50875 SCD5YOR329C 2619 nt2.17□□□□□ -2.06
SPT20P50875 DCP2YNL118C 2913 nt2.17□□□□□ -2.06
SPT20P50875 TTI1YKL033W 3117 nt2.17□□□□□ -2.06
SPT20P50875 TUS1YLR425W 3924 nt2.17□□□□□ -2.06
SPT20P50875 CHS6YJL099W 2241 nt2.16□□□□□ -2.06
SPT20P50875 TOF1YNL273W 3717 nt2.16□□□□□ -2.06
SPT20P50875 MAK10YEL053C 2202 nt2.15□□□□□ -2.07
SPT20P50875 YLL054CYLL054C 2532 nt2.15□□□□□ -2.07
SPT20P50875 SAP190YKR028W 3102 nt2.14□□□□□ -2.07
SPT20P50875 MLH3YPL164C 2148 nt2.14□□□□□ -2.07
SPT20P50875 TIM9YEL020W-A 264 nt2.14□□□□□ -2.07
SPT20P50875 tS(GCU)Q1tS(GCU)Q1 86 nt2.14□□□□□ -2.07
SPT20P50875 YGR109W-BYGR109W-B 4644 nt2.14□□□□□ -2.07
SPT20P50875 IRC8YJL051W 2469 nt2.14□□□□□ -2.07
SPT20P50875 UBP1YDL122W 2430 nt2.13□□□□□ -2.07
SPT20P50875 DNF1YER166W 4716 nt2.13□□□□□ -2.07
SPT20P50875 NUP100YKL068W 2880 nt2.13□□□□□ -2.07
SPT20P50875 SMC6YLR383W 3345 nt2.12□□□□□ -2.07
SPT20P50875 YCR087C-AYCR087C-A 462 nt2.12□□□□□ -2.07
SPT20P50875 UBR1YGR184C 5853 nt2.11□□□□□ -2.07
SPT20P50875 YGL182CYGL182C 324 nt2.11□□□□□ -2.07
SPT20P50875 YLL066W-BYLL066W-B 171 nt2.11□□□□□ -2.07
SPT20P50875 SEC16YPL085W 6588 nt2.11□□□□□ -2.07
SPT20P50875 YPR097WYPR097W 3222 nt2.11□□□□□ -2.07
SPT20P50875 HMI1YOL095C 2121 nt2.11□□□□□ -2.07
SPT20P50875 STB6YKL072W 2301 nt2.11□□□□□ -2.07
SPT20P50875 SSD1YDR293C 3753 nt2.1□□□□□ -2.07
SPT20P50875 YNL144CYNL144C 2223 nt2.1□□□□□ -2.07
SPT20P50875 RCO1YMR075W 2055 nt2.1□□□□□ -2.07
SPT20P50875 YJR039WYJR039W 3366 nt2.1□□□□□ -2.07
SPT20P50875 STH1YIL126W 4080 nt2.1□□□□□ -2.07
SPT20P50875 APL1YJR005W 2103 nt2.09□□□□□ -2.07
SPT20P50875 YKR075W-AYKR075W-A 270 nt2.09□□□□□ -2.07
SPT20P50875 BNI1YNL271C 5862 nt2.09□□□□□ -2.08
SPT20P50875 snR45snR45 172 nt2.08□□□□□ -2.08
SPT20P50875 LHS1YKL073W 2646 nt2.07□□□□□ -2.08
SPT20P50875 PKH2YOL100W 3246 nt2.07□□□□□ -2.08
SPT20P50875 COG4YPR105C 2586 nt2.07□□□□□ -2.08
SPT20P50875 MDS3YGL197W 4464 nt2.07□□□□□ -2.08
SPT20P50875 YMR175W-AYMR175W-A 195 nt2.06□□□□□ -2.08
SPT20P50875 AGC1YPR021C 2709 nt2.05□□□□□ -2.08
SPT20P50875 QCR9YGR183C 201 nt2.05□□□□□ -2.08
SPT20P50875 YHR131W-AYHR131W-A 246 nt2.05□□□□□ -2.08
SPT20P50875 POL5YEL055C 3069 nt2.05□□□□□ -2.08
SPT20P50875 TFC3YAL001C 3483 nt2.04□□□□□ -2.08
SPT20P50875 YHR180W-AYHR180W-A 183 nt2.04□□□□□ -2.08
SPT20P50875 BUD2YKL092C 3315 nt2.04□□□□□ -2.08
SPT20P50875 YLL020CYLL020C 306 nt2.04□□□□□ -2.08
SPT20P50875 YAL067W-AYAL067W-A 228 nt2.04□□□□□ -2.08
SPT20P50875 snR39BsnR39B 96 nt2.04□□□□□ -2.08
SPT20P50875 RGA1YOR127W 3024 nt2.04□□□□□ -2.08
SPT20P50875 TOR2YKL203C 7425 nt2.03□□□□□ -2.08
SPT20P50875 SLI15YBR156C 2097 nt2.03□□□□□ -2.08
SPT20P50875 RAV1YJR033C 4074 nt2.03□□□□□ -2.08
SPT20P50875 SPP41YDR464W 4308 nt2.03□□□□□ -2.09
SPT20P50875 BFR2YDR299W 1605 nt2.02□□□□□ -2.09
SPT20P50875 EAF1YDR359C 2949 nt2.02□□□□□ -2.09
SPT20P50875 YJL052C-AYJL052C-A 120 nt2.02□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 28.8 ms