Protein–RNA interactions for Protein: P46963

CTK3, CTD kinase subunit gamma, yeastyeast

Predicted RBP Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTK3P46963 YCS4YLR272C 3531 nt1.13□□□□□ -2.23
CTK3P46963 IML1YJR138W 4755 nt1.13□□□□□ -2.23
CTK3P46963 LCD1YDR499W 2244 nt1.13□□□□□ -2.23
CTK3P46963 SIP4YJL089W 2490 nt1.13□□□□□ -2.23
CTK3P46963 MMS4YBR098W 2076 nt1.12□□□□□ -2.23
CTK3P46963 RPL35AYDL191W 363 nt1.12□□□□□ -2.23
CTK3P46963 YIR044CYIR044C 186 nt1.12□□□□□ -2.23
CTK3P46963 snR14snR14 160 nt1.12□□□□□ -2.23
CTK3P46963 CUL3YGR003W 2235 nt1.12□□□□□ -2.23
CTK3P46963 SWI4YER111C 3282 nt1.12□□□□□ -2.23
CTK3P46963 CLU1YMR012W 3834 nt1.11□□□□□ -2.23
CTK3P46963 RAD34YDR314C 2079 nt1.11□□□□□ -2.23
CTK3P46963 YAF9YNL107W 681 nt1.11□□□□□ -2.23
CTK3P46963 COG4YPR105C 2586 nt1.11□□□□□ -2.23
CTK3P46963 NUP145YGL092W 3954 nt1.1□□□□□ -2.23
CTK3P46963 RRT15YLR162W-A 189 nt1.1□□□□□ -2.23
CTK3P46963 YPR063CYPR063C 423 nt1.1□□□□□ -2.23
CTK3P46963 PKH2YOL100W 3246 nt1.1□□□□□ -2.23
CTK3P46963 FIG4YNL325C 2640 nt1.1□□□□□ -2.23
CTK3P46963 APL1YJR005W 2103 nt1.09□□□□□ -2.23
CTK3P46963 GPG1YGL121C 381 nt1.09□□□□□ -2.23
CTK3P46963 YHR007C-AYHR007C-A 216 nt1.09□□□□□ -2.23
CTK3P46963 YLL020CYLL020C 306 nt1.09□□□□□ -2.23
CTK3P46963 HTB2YBL002W 396 nt1.09□□□□□ -2.23
CTK3P46963 YPL038W-AYPL038W-A 192 nt1.09□□□□□ -2.23
CTK3P46963 NUP188YML103C 4968 nt1.09□□□□□ -2.24
CTK3P46963 SPT7YBR081C 3999 nt1.08□□□□□ -2.24
CTK3P46963 ALY2YJL084C 3141 nt1.08□□□□□ -2.24
CTK3P46963 YDL240C-AYDL240C-A 138 nt1.08□□□□□ -2.24
CTK3P46963 MAM33YIL070C 801 nt1.08□□□□□ -2.24
CTK3P46963 YAR029WYAR029W 225 nt1.08□□□□□ -2.24
CTK3P46963 NIP100YPL174C 2607 nt1.08□□□□□ -2.24
CTK3P46963 PTP2YOR208W 2253 nt1.06□□□□□ -2.24
CTK3P46963 YDR102CYDR102C 333 nt1.06□□□□□ -2.24
CTK3P46963 APL3YBL037W 3078 nt1.06□□□□□ -2.24
CTK3P46963 MYO1YHR023W 5787 nt1.06□□□□□ -2.24
CTK3P46963 PDE2YOR360C 1581 nt1.05□□□□□ -2.24
CTK3P46963 ROM2YLR371W 4071 nt1.05□□□□□ -2.24
CTK3P46963 YDR048CYDR048C 315 nt1.05□□□□□ -2.24
CTK3P46963 YDR524W-CYDR524W-C 90 nt1.05□□□□□ -2.24
CTK3P46963 YBL008W-AYBL008W-A 240 nt1.05□□□□□ -2.24
CTK3P46963 YPL225WYPL225W 441 nt1.05□□□□□ -2.24
CTK3P46963 YBR221W-AYBR221W-A 105 nt1.05□□□□□ -2.24
CTK3P46963 IFH1YLR223C 3258 nt1.05□□□□□ -2.24
CTK3P46963 YPR117WYPR117W 7470 nt1.04□□□□□ -2.24
CTK3P46963 SET3YKR029C 2256 nt1.04□□□□□ -2.24
CTK3P46963 NST1YNL091W 3723 nt1.04□□□□□ -2.24
CTK3P46963 TAR1YLR154W-C 375 nt1.04□□□□□ -2.24
CTK3P46963 YBR200W-AYBR200W-A 165 nt1.04□□□□□ -2.24
CTK3P46963 STO1YMR125W 2586 nt1.04□□□□□ -2.24
CTK3P46963 YLL007CYLL007C 1998 nt1.04□□□□□ -2.24
CTK3P46963 YDL206WYDL206W 2289 nt1.04□□□□□ -2.24
CTK3P46963 YJR011CYJR011C 786 nt1.03□□□□□ -2.24
CTK3P46963 SLD3YGL113W 2007 nt1.03□□□□□ -2.25
CTK3P46963 SMC1YFL008W 3678 nt1.02□□□□□ -2.25
CTK3P46963 PAN2YGL094C 3348 nt1.02□□□□□ -2.25
CTK3P46963 OST1YJL002C 1431 nt1.01□□□□□ -2.25
CTK3P46963 snR36snR36 182 nt1.01□□□□□ -2.25
CTK3P46963 HMRA2YCR096C 360 nt1□□□□□ -2.25
CTK3P46963 EAF1YDR359C 2949 nt1□□□□□ -2.25
CTK3P46963 WAR1YML076C 2835 nt0.99□□□□□ -2.25
CTK3P46963 NHP2YDL208W 471 nt0.99□□□□□ -2.25
CTK3P46963 RPS30BYOR182C 192 nt0.99□□□□□ -2.25
CTK3P46963 YAR009CYAR009C 3591 nt0.99□□□□□ -2.25
CTK3P46963 YCK3YER123W 1575 nt0.99□□□□□ -2.25
CTK3P46963 Q0142Q0142 177 nt0.98□□□□□ -2.25
CTK3P46963 YKL118WYKL118W 312 nt0.98□□□□□ -2.25
CTK3P46963 YKL136WYKL136W 399 nt0.98□□□□□ -2.25
CTK3P46963 STB6YKL072W 2301 nt0.97□□□□□ -2.25
CTK3P46963 YDR413CYDR413C 576 nt0.97□□□□□ -2.25
CTK3P46963 YFL032WYFL032W 321 nt0.97□□□□□ -2.25
CTK3P46963 DBP6YNR038W 1890 nt0.97□□□□□ -2.25
CTK3P46963 SSS1YDR086C 243 nt0.96□□□□□ -2.26
CTK3P46963 YDR183C-AYDR183C-A 258 nt0.96□□□□□ -2.26
CTK3P46963 PAU24YBR301W 363 nt0.96□□□□□ -2.26
CTK3P46963 YDR521WYDR521W 336 nt0.95□□□□□ -2.26
CTK3P46963 INA22YIR024C 651 nt0.95□□□□□ -2.26
CTK3P46963 PAM16YJL104W 450 nt0.95□□□□□ -2.26
CTK3P46963 CDC39YCR093W 6327 nt0.95□□□□□ -2.26
CTK3P46963 NUP157YER105C 4176 nt0.94□□□□□ -2.26
CTK3P46963 YER097WYER097W 330 nt0.94□□□□□ -2.26
CTK3P46963 YBR206WYBR206W 324 nt0.94□□□□□ -2.26
CTK3P46963 HTL1YCR020W-B 237 nt0.93□□□□□ -2.26
CTK3P46963 YFL063WYFL063W 456 nt0.93□□□□□ -2.26
CTK3P46963 YIL115W-AYIL115W-A 372 nt0.93□□□□□ -2.26
CTK3P46963 YGL149WYGL149W 306 nt0.92□□□□□ -2.26
CTK3P46963 snR60snR60 104 nt0.91□□□□□ -2.26
CTK3P46963 EMT1tM(CAU)D 73 nt0.91□□□□□ -2.26
CTK3P46963 EMT5tM(CAU)J1 73 nt0.91□□□□□ -2.26
CTK3P46963 EMT3tM(CAU)J2 73 nt0.91□□□□□ -2.26
CTK3P46963 EMT4tM(CAU)M 73 nt0.91□□□□□ -2.26
CTK3P46963 EMT2tM(CAU)O2 73 nt0.91□□□□□ -2.26
CTK3P46963 YHL042WYHL042W 453 nt0.91□□□□□ -2.26
CTK3P46963 YIL032CYIL032C 357 nt0.91□□□□□ -2.26
CTK3P46963 RPS25BYLR333C 327 nt0.91□□□□□ -2.26
CTK3P46963 YMR193C-AYMR193C-A 387 nt0.91□□□□□ -2.26
CTK3P46963 SPO21YOL091W 1830 nt0.9□□□□□ -2.27
CTK3P46963 YDR344CYDR344C 444 nt0.9□□□□□ -2.27
CTK3P46963 YJL120WYJL120W 324 nt0.9□□□□□ -2.27
CTK3P46963 YBR064WYBR064W 429 nt0.9□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 30.8 ms