Protein–RNA interactions for Protein: P40541

IRR1, Cohesin subunit SCC3, yeastyeast

Predictions only

Length 1,150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IRR1P40541 INO80YGL150C 4470 nt2.18□□□□□ -2.06
IRR1P40541 TFC3YAL001C 3483 nt2.18□□□□□ -2.06
IRR1P40541 SPP41YDR464W 4308 nt2.17□□□□□ -2.06
IRR1P40541 PAU3YCR104W 375 nt2.17□□□□□ -2.06
IRR1P40541 ULI1YFR026C 510 nt2.17□□□□□ -2.06
IRR1P40541 ATG9YDL149W 2994 nt2.16□□□□□ -2.06
IRR1P40541 SFB2YNL049C 2631 nt2.16□□□□□ -2.06
IRR1P40541 COF1YLL050C 432 nt2.16□□□□□ -2.06
IRR1P40541 DGR1YNL130C-A 147 nt2.16□□□□□ -2.06
IRR1P40541 MSH6YDR097C 3729 nt2.16□□□□□ -2.06
IRR1P40541 PRP39YML046W 1890 nt2.16□□□□□ -2.06
IRR1P40541 MYO4YAL029C 4416 nt2.16□□□□□ -2.06
IRR1P40541 YNL338WYNL338W 159 nt2.15□□□□□ -2.07
IRR1P40541 UTP21YLR409C 2820 nt2.15□□□□□ -2.07
IRR1P40541 PDR8YLR266C 2106 nt2.15□□□□□ -2.07
IRR1P40541 ALK1YGL021W 2283 nt2.15□□□□□ -2.07
IRR1P40541 YLR035C-AYLR035C-A 3468 nt2.14□□□□□ -2.07
IRR1P40541 UTP22YGR090W 3714 nt2.14□□□□□ -2.07
IRR1P40541 YDR521WYDR521W 336 nt2.14□□□□□ -2.07
IRR1P40541 snR46snR46 197 nt2.14□□□□□ -2.07
IRR1P40541 TRS65YGR166W 1683 nt2.14□□□□□ -2.07
IRR1P40541 SLI15YBR156C 2097 nt2.14□□□□□ -2.07
IRR1P40541 YJL052C-AYJL052C-A 120 nt2.13□□□□□ -2.07
IRR1P40541 TOR2YKL203C 7425 nt2.13□□□□□ -2.07
IRR1P40541 PIP2YOR363C 2991 nt2.13□□□□□ -2.07
IRR1P40541 COG4YPR105C 2586 nt2.12□□□□□ -2.07
IRR1P40541 PKH2YOL100W 3246 nt2.12□□□□□ -2.07
IRR1P40541 PBY1YBR094W 2262 nt2.12□□□□□ -2.07
IRR1P40541 MGA2YIR033W 3342 nt2.11□□□□□ -2.07
IRR1P40541 UFD4YKL010C 4452 nt2.11□□□□□ -2.07
IRR1P40541 YLL019W-AYLL019W-A 93 nt2.11□□□□□ -2.07
IRR1P40541 TMA7YLR262C-A 195 nt2.11□□□□□ -2.07
IRR1P40541 AHC1YOR023C 1701 nt2.11□□□□□ -2.07
IRR1P40541 SPO24YPR036W-A 204 nt2.1□□□□□ -2.07
IRR1P40541 LRE1YCL051W 1752 nt2.1□□□□□ -2.07
IRR1P40541 YDL007C-AYDL007C-A 258 nt2.09□□□□□ -2.07
IRR1P40541 YOR345CYOR345C 351 nt2.09□□□□□ -2.07
IRR1P40541 NCA2YPR155C 1851 nt2.09□□□□□ -2.08
IRR1P40541 UBR2YLR024C 5619 nt2.09□□□□□ -2.08
IRR1P40541 AIM44YPL158C 2277 nt2.08□□□□□ -2.08
IRR1P40541 BRE1YDL074C 2103 nt2.08□□□□□ -2.08
IRR1P40541 YJR039WYJR039W 3366 nt2.08□□□□□ -2.08
IRR1P40541 YDL196WYDL196W 330 nt2.08□□□□□ -2.08
IRR1P40541 YBR206WYBR206W 324 nt2.08□□□□□ -2.08
IRR1P40541 HSL1YKL101W 4557 nt2.07□□□□□ -2.08
IRR1P40541 NEO1YIL048W 3456 nt2.07□□□□□ -2.08
IRR1P40541 FIG4YNL325C 2640 nt2.07□□□□□ -2.08
IRR1P40541 IFH1YLR223C 3258 nt2.07□□□□□ -2.08
IRR1P40541 SLD3YGL113W 2007 nt2.07□□□□□ -2.08
IRR1P40541 GCN2YDR283C 4980 nt2.06□□□□□ -2.08
IRR1P40541 ATP8Q0080 147 nt2.06□□□□□ -2.08
IRR1P40541 EMC5YIL027C 426 nt2.06□□□□□ -2.08
IRR1P40541 snR52snR52 92 nt2.06□□□□□ -2.08
IRR1P40541 NUT1YGL151W 3399 nt2.06□□□□□ -2.08
IRR1P40541 YHR210CYHR210C 1026 nt2.05□□□□□ -2.08
IRR1P40541 LHS1YKL073W 2646 nt2.04□□□□□ -2.08
IRR1P40541 FKS1YLR342W 5631 nt2.04□□□□□ -2.08
IRR1P40541 ADR1YDR216W 3972 nt2.04□□□□□ -2.08
IRR1P40541 SEC31YDL195W 3822 nt2.03□□□□□ -2.08
IRR1P40541 YHR214C-BYHR214C-B 5382 nt2.03□□□□□ -2.08
IRR1P40541 RAD50YNL250W 3939 nt2.02□□□□□ -2.09
IRR1P40541 RPL33BYOR234C 324 nt2.02□□□□□ -2.09
IRR1P40541 YMR045CYMR045C 5268 nt2.02□□□□□ -2.09
IRR1P40541 YGR109W-BYGR109W-B 4644 nt2.01□□□□□ -2.09
IRR1P40541 TRM3YDL112W 4311 nt2.01□□□□□ -2.09
IRR1P40541 SBE22YHR103W 2559 nt2.01□□□□□ -2.09
IRR1P40541 TBS1YBR150C 3285 nt2□□□□□ -2.09
IRR1P40541 GYP5YPL249C 2685 nt2□□□□□ -2.09
IRR1P40541 SKI3YPR189W 4299 nt2□□□□□ -2.09
IRR1P40541 YDL206WYDL206W 2289 nt1.98□□□□□ -2.09
IRR1P40541 YDR354C-AYDR354C-A 144 nt1.98□□□□□ -2.09
IRR1P40541 UFD2YDL190C 2886 nt1.98□□□□□ -2.09
IRR1P40541 HAL9YOL089C 3093 nt1.97□□□□□ -2.09
IRR1P40541 ALY2YJL084C 3141 nt1.97□□□□□ -2.09
IRR1P40541 BPH1YCR032W 6504 nt1.97□□□□□ -2.09
IRR1P40541 KIP1YBL063W 3336 nt1.96□□□□□ -2.1
IRR1P40541 PMP1YCR024C-A 123 nt1.96□□□□□ -2.1
IRR1P40541 YEL073CYEL073C 324 nt1.96□□□□□ -2.1
IRR1P40541 YOR170WYOR170W 306 nt1.96□□□□□ -2.1
IRR1P40541 YOR381W-AYOR381W-A 168 nt1.96□□□□□ -2.1
IRR1P40541 KCS1YDR017C 3153 nt1.96□□□□□ -2.1
IRR1P40541 COY1YKL179C 2040 nt1.96□□□□□ -2.1
IRR1P40541 YER172C-AYER172C-A 381 nt1.95□□□□□ -2.1
IRR1P40541 tT(UGU)HtT(UGU)H 72 nt1.95□□□□□ -2.1
IRR1P40541 YJL026C-AYJL026C-A 222 nt1.95□□□□□ -2.1
IRR1P40541 SLX4YLR135W 2247 nt1.95□□□□□ -2.1
IRR1P40541 MYO2YOR326W 4725 nt1.94□□□□□ -2.1
IRR1P40541 YLR419WYLR419W 4308 nt1.94□□□□□ -2.1
IRR1P40541 MMS4YBR098W 2076 nt1.94□□□□□ -2.1
IRR1P40541 SMC4YLR086W 4257 nt1.93□□□□□ -2.1
IRR1P40541 YJL022WYJL022W 309 nt1.93□□□□□ -2.1
IRR1P40541 YNL170WYNL170W 396 nt1.93□□□□□ -2.1
IRR1P40541 PAN2YGL094C 3348 nt1.92□□□□□ -2.1
IRR1P40541 CTF4YPR135W 2784 nt1.92□□□□□ -2.1
IRR1P40541 YOR161W-BYOR161W-B 261 nt1.92□□□□□ -2.1
IRR1P40541 YLL054CYLL054C 2532 nt1.92□□□□□ -2.1
IRR1P40541 MDS3YGL197W 4464 nt1.91□□□□□ -2.1
IRR1P40541 YMR247W-AYMR247W-A 144 nt1.91□□□□□ -2.1
IRR1P40541 APL1YJR005W 2103 nt1.9□□□□□ -2.1
IRR1P40541 PKH3YDR466W 2697 nt1.9□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 23.9 ms