Protein–RNA interactions for Protein: P39980

SIT1, Siderophore iron transporter 1, yeastyeast

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SIT1P39980 YHR210CYHR210C 1026 nt2.11□□□□□ -2.07
SIT1P39980 YLR012CYLR012C 300 nt2.11□□□□□ -2.07
SIT1P39980 RPL33BYOR234C 324 nt2.11□□□□□ -2.07
SIT1P39980 PDR8YLR266C 2106 nt2.11□□□□□ -2.07
SIT1P39980 SGS1YMR190C 4344 nt2.1□□□□□ -2.07
SIT1P39980 FIG4YNL325C 2640 nt2.1□□□□□ -2.07
SIT1P39980 CSF1YLR087C 8877 nt2.1□□□□□ -2.07
SIT1P39980 ATG9YDL149W 2994 nt2.1□□□□□ -2.07
SIT1P39980 YDR521WYDR521W 336 nt2.09□□□□□ -2.07
SIT1P39980 YNL170WYNL170W 396 nt2.09□□□□□ -2.07
SIT1P39980 COG4YPR105C 2586 nt2.09□□□□□ -2.07
SIT1P39980 SLI15YBR156C 2097 nt2.09□□□□□ -2.07
SIT1P39980 LHS1YKL073W 2646 nt2.09□□□□□ -2.08
SIT1P39980 SFB2YNL049C 2631 nt2.08□□□□□ -2.08
SIT1P39980 SLD3YGL113W 2007 nt2.08□□□□□ -2.08
SIT1P39980 SBE22YHR103W 2559 nt2.07□□□□□ -2.08
SIT1P39980 MGA2YIR033W 3342 nt2.07□□□□□ -2.08
SIT1P39980 SSD1YDR293C 3753 nt2.07□□□□□ -2.08
SIT1P39980 PMP1YCR024C-A 123 nt2.07□□□□□ -2.08
SIT1P39980 YOR381W-AYOR381W-A 168 nt2.07□□□□□ -2.08
SIT1P39980 ATG11YPR049C 3537 nt2.07□□□□□ -2.08
SIT1P39980 UBR2YLR024C 5619 nt2.07□□□□□ -2.08
SIT1P39980 UTP21YLR409C 2820 nt2.07□□□□□ -2.08
SIT1P39980 NEO1YIL048W 3456 nt2.06□□□□□ -2.08
SIT1P39980 YMR247W-AYMR247W-A 144 nt2.06□□□□□ -2.08
SIT1P39980 YBR206WYBR206W 324 nt2.06□□□□□ -2.08
SIT1P39980 YPL216WYPL216W 3309 nt2.06□□□□□ -2.08
SIT1P39980 YEL073CYEL073C 324 nt2.05□□□□□ -2.08
SIT1P39980 SPO24YPR036W-A 204 nt2.04□□□□□ -2.08
SIT1P39980 tC(GCA)BtC(GCA)B 72 nt2.03□□□□□ -2.08
SIT1P39980 tC(GCA)GtC(GCA)G 72 nt2.03□□□□□ -2.08
SIT1P39980 tC(GCA)P1tC(GCA)P1 72 nt2.03□□□□□ -2.08
SIT1P39980 tC(GCA)P2tC(GCA)P2 72 nt2.03□□□□□ -2.08
SIT1P39980 YGR109W-BYGR109W-B 4644 nt2.03□□□□□ -2.08
SIT1P39980 COY1YKL179C 2040 nt2.03□□□□□ -2.08
SIT1P39980 YDR354C-AYDR354C-A 144 nt2.02□□□□□ -2.09
SIT1P39980 APL5YPL195W 2799 nt2.02□□□□□ -2.09
SIT1P39980 UFD4YKL010C 4452 nt2.01□□□□□ -2.09
SIT1P39980 RAD50YNL250W 3939 nt2□□□□□ -2.09
SIT1P39980 MBB1YJL199C 327 nt2□□□□□ -2.09
SIT1P39980 COA4YLR218C 453 nt2□□□□□ -2.09
SIT1P39980 TMA7YLR262C-A 195 nt2□□□□□ -2.09
SIT1P39980 YOR161W-BYOR161W-B 261 nt2□□□□□ -2.09
SIT1P39980 NAB6YML117W 3405 nt2□□□□□ -2.09
SIT1P39980 ADR1YDR216W 3972 nt2□□□□□ -2.09
SIT1P39980 GCN2YDR283C 4980 nt1.99□□□□□ -2.09
SIT1P39980 YLR035C-AYLR035C-A 3468 nt1.99□□□□□ -2.09
SIT1P39980 YJL052C-AYJL052C-A 120 nt1.99□□□□□ -2.09
SIT1P39980 IFH1YLR223C 3258 nt1.99□□□□□ -2.09
SIT1P39980 YJR039WYJR039W 3366 nt1.98□□□□□ -2.09
SIT1P39980 SEC31YDL195W 3822 nt1.98□□□□□ -2.09
SIT1P39980 SDH6YDR379C-A 240 nt1.98□□□□□ -2.09
SIT1P39980 SCD5YOR329C 2619 nt1.97□□□□□ -2.09
SIT1P39980 YGR164WYGR164W 336 nt1.97□□□□□ -2.09
SIT1P39980 MDS3YGL197W 4464 nt1.96□□□□□ -2.1
SIT1P39980 YDL206WYDL206W 2289 nt1.95□□□□□ -2.1
SIT1P39980 tT(UGU)HtT(UGU)H 72 nt1.95□□□□□ -2.1
SIT1P39980 FKS3YMR306W 5358 nt1.94□□□□□ -2.1
SIT1P39980 YLR419WYLR419W 4308 nt1.94□□□□□ -2.1
SIT1P39980 HAL9YOL089C 3093 nt1.94□□□□□ -2.1
SIT1P39980 EMC5YIL027C 426 nt1.94□□□□□ -2.1
SIT1P39980 RPS30BYOR182C 192 nt1.94□□□□□ -2.1
SIT1P39980 SLN1YIL147C 3663 nt1.94□□□□□ -2.1
SIT1P39980 YIL134C-AYIL134C-A 204 nt1.93□□□□□ -2.1
SIT1P39980 INO80YGL150C 4470 nt1.93□□□□□ -2.1
SIT1P39980 SMC4YLR086W 4257 nt1.93□□□□□ -2.1
SIT1P39980 PAA1YDR071C 576 nt1.92□□□□□ -2.1
SIT1P39980 YER172C-AYER172C-A 381 nt1.92□□□□□ -2.1
SIT1P39980 YJL026C-AYJL026C-A 222 nt1.92□□□□□ -2.1
SIT1P39980 YBL053WYBL053W 375 nt1.92□□□□□ -2.1
SIT1P39980 SLX4YLR135W 2247 nt1.91□□□□□ -2.1
SIT1P39980 NUT1YGL151W 3399 nt1.91□□□□□ -2.1
SIT1P39980 YCR038W-AYCR038W-A 126 nt1.91□□□□□ -2.1
SIT1P39980 DNA2YHR164C 4569 nt1.91□□□□□ -2.1
SIT1P39980 BRE1YDL074C 2103 nt1.91□□□□□ -2.1
SIT1P39980 TDA9YML081W 3756 nt1.9□□□□□ -2.1
SIT1P39980 UFD2YDL190C 2886 nt1.9□□□□□ -2.1
SIT1P39980 APL1YJR005W 2103 nt1.9□□□□□ -2.1
SIT1P39980 KIP1YBL063W 3336 nt1.9□□□□□ -2.1
SIT1P39980 COX12YLR038C 252 nt1.9□□□□□ -2.11
SIT1P39980 YPL044CYPL044C 549 nt1.9□□□□□ -2.11
SIT1P39980 PRP42YDR235W 1635 nt1.9□□□□□ -2.11
SIT1P39980 MON2YNL297C 4911 nt1.89□□□□□ -2.11
SIT1P39980 PDR11YIL013C 4236 nt1.89□□□□□ -2.11
SIT1P39980 snR14snR14 160 nt1.88□□□□□ -2.11
SIT1P39980 MMS4YBR098W 2076 nt1.87□□□□□ -2.11
SIT1P39980 snR70snR70 164 nt1.87□□□□□ -2.11
SIT1P39980 SKI3YPR189W 4299 nt1.86□□□□□ -2.11
SIT1P39980 YLL054CYLL054C 2532 nt1.86□□□□□ -2.11
SIT1P39980 SMC1YFL008W 3678 nt1.86□□□□□ -2.11
SIT1P39980 TTI1YKL033W 3117 nt1.86□□□□□ -2.11
SIT1P39980 YJL022WYJL022W 309 nt1.86□□□□□ -2.11
SIT1P39980 YNL211CYNL211C 261 nt1.86□□□□□ -2.11
SIT1P39980 YBR221W-AYBR221W-A 105 nt1.86□□□□□ -2.11
SIT1P39980 PDR3YBL005W 2931 nt1.86□□□□□ -2.11
SIT1P39980 COA6YMR244C-A 315 nt1.85□□□□□ -2.11
SIT1P39980 PKH3YDR466W 2697 nt1.84□□□□□ -2.11
SIT1P39980 tW(CCA)G1tW(CCA)G1 72 nt1.84□□□□□ -2.11
SIT1P39980 tW(CCA)G2tW(CCA)G2 72 nt1.84□□□□□ -2.11
SIT1P39980 tW(CCA)JtW(CCA)J 72 nt1.84□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 33.7 ms